RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 TY2B-DR2Q03494 1770 aa-2.65□□□□□ -2.83
snR55snR55 TY2B-DR3Q07791 1770 aaKnown RBP-2.65□□□□□ -2.83
snR55snR55 TY2B-OR1Q12113 1770 aa-2.65□□□□□ -2.83
snR55snR55 TY2B-DR1Q12472 1770 aa-2.65□□□□□ -2.83
snR55snR55 TY2B-BQ12491 1770 aa-2.65□□□□□ -2.83
snR55snR55 TY2B-OR2Q12501 1770 aa-2.65□□□□□ -2.83
snR55snR55 YRF1-1P0CX20 1796 aa-2.66□□□□□ -2.83
snR55snR55 YRF1-5P0CX21 1796 aa-2.66□□□□□ -2.83
snR55snR55 YRF1-8P0CX22 1796 aa-2.66□□□□□ -2.83
snR55snR55 VPS51P36116 164 aa-2.66□□□□□ -2.84
snR55snR55 TVP18Q04767 167 aa-2.66□□□□□ -2.84
snR55snR55 CNL1Q06333 122 aa-2.66□□□□□ -2.84
snR55snR55 ROX3P25046 220 aa-2.67□□□□□ -2.84
snR55snR55 YER187WP40102 141 aa-2.67□□□□□ -2.84
snR55snR55 RPL38P49167 78 aaKnown RBP-2.67□□□□□ -2.84
snR55snR55 GPI19Q04082 140 aa-2.67□□□□□ -2.84
snR55snR55 PCC1Q3E833 88 aa-2.67□□□□□ -2.84
snR55snR55 MIC10Q96VH5 97 aa-2.67□□□□□ -2.84
snR55snR55 IMP2P46972 177 aa-2.68□□□□□ -2.84
snR55snR55 AIM11P87275 137 aa-2.68□□□□□ -2.84
snR55snR55 YLR042CQ07990 161 aa-2.68□□□□□ -2.84
snR55snR55 BUD4P47136 1447 aa-2.68□□□□□ -2.84
snR55snR55 BPH1P25356 2167 aa-2.68□□□□□ -2.84
snR55snR55 AME1P38313 324 aa-2.69□□□□□ -2.84
snR55snR55 SSN2P38931 1420 aa-2.69□□□□□ -2.84
snR55snR55 YCR101CP25607 182 aa-2.7□□□□□ -2.84
snR55snR55 TRS20P38334 175 aa-2.7□□□□□ -2.84
snR55snR55 RGI1P40043 161 aaPredicted RBP-2.7□□□□□ -2.84
snR55snR55 ARC19P33204 171 aaKnown RBP-2.71□□□□□ -2.84
snR55snR55 PDX3P38075 228 aaKnown RBP-2.71□□□□□ -2.84
snR55snR55 RSM18P40033 138 aa-2.71□□□□□ -2.84
snR55snR55 OST5Q92316 86 aa-2.71□□□□□ -2.84
snR55snR55 ACP1P32463 125 aa-2.72□□□□□ -2.84
snR55snR55 YGR039WP53225 103 aa-2.72□□□□□ -2.84
snR55snR55 YHR130CP38834 111 aa-2.73□□□□□ -2.85
snR55snR55 MIX14Q04341 121 aa-2.73□□□□□ -2.85
snR55snR55 YIR020CP40575 100 aa-2.74□□□□□ -2.85
snR55snR55 MPC1P53157 130 aaKnown RBP-2.74□□□□□ -2.85
snR55snR55 GRX3Q03835 250 aa-2.74□□□□□ -2.85
snR55snR55 SPO14P36126 1683 aa-2.74□□□□□ -2.85
snR55snR55 RPL22BP56628 122 aaKnown RBP-2.75□□□□□ -2.85
snR55snR55 YOR376W-AQ3E805 51 aa-2.75□□□□□ -2.85
snR55snR55 PAU24P38155 120 aa-2.76□□□□□ -2.85
snR55snR55 MRX7P53869 86 aa-2.76□□□□□ -2.85
snR55snR55 TY1B-BRQ12193 1756 aa-2.77□□□□□ -2.85
snR55snR55 LSM6Q06406 86 aaKnown RBP-2.77□□□□□ -2.85
snR55snR55 YDR182W-AQ3E796 67 aa-2.77□□□□□ -2.85
snR55snR55 YPL038W-AQ3E7B4 63 aa-2.77□□□□□ -2.85
snR55snR55 YBR292CP38357 123 aa-2.78□□□□□ -2.85
snR55snR55 SNF11P38956 169 aa-2.78□□□□□ -2.85
snR55snR55 SNN1P48232 102 aa-2.78□□□□□ -2.85
snR55snR55 ICY1Q04329 127 aa-2.78□□□□□ -2.85
snR55snR55 NUM1Q00402 2748 aa-2.78□□□□□ -2.86
snR55snR55 STT4P37297 1900 aa-2.8□□□□□ -2.86
snR55snR55 COX7P10174 60 aa-2.8□□□□□ -2.86
snR55snR55 YOL118CQ08259 102 aa-2.8□□□□□ -2.86
snR55snR55 YOR1P53049 1477 aa-2.8□□□□□ -2.86
snR55snR55 NTE1Q04958 1679 aa-2.8□□□□□ -2.86
snR55snR55 VTH1P40438 1549 aa-2.81□□□□□ -2.86
snR55snR55 VTH2P40890 1549 aa-2.81□□□□□ -2.86
snR55snR55 PAU2P32612 120 aa-2.81□□□□□ -2.86
snR55snR55 DNF3Q12674 1656 aa-2.82□□□□□ -2.86
snR55snR55 MOG1P47123 218 aa-2.82□□□□□ -2.86
snR55snR55 YGL204CP53089 101 aa-2.82□□□□□ -2.86
snR55snR55 CSN9Q03981 162 aa-2.82□□□□□ -2.86
snR55snR55 FRQ1Q06389 190 aa-2.82□□□□□ -2.86
snR55snR55 CMC2Q3E7A4 109 aa-2.82□□□□□ -2.86
snR55snR55 COX12Q01519 83 aa-2.83□□□□□ -2.86
snR55snR55 TY1B-NL2Q99337 1749 aaKnown RBP-2.83□□□□□ -2.86
snR55snR55 TY1B-MR1Q04214 1755 aa-2.84□□□□□ -2.86
snR55snR55 ATG38Q05789 226 aaKnown RBP-2.84□□□□□ -2.86
snR55snR55 YLR361C-AQ3E795 98 aa-2.84□□□□□ -2.86
snR55snR55 Q0032Q9ZZX7 96 aa-2.84□□□□□ -2.86
snR55snR55 TY1B-ER2Q03619 1755 aa-2.84□□□□□ -2.86
snR55snR55 TY1B-LR1Q12088 1755 aaKnown RBP-2.84□□□□□ -2.86
snR55snR55 TY1B-NL1Q12112 1755 aa-2.84□□□□□ -2.86
snR55snR55 TY1B-GR3Q12316 1755 aa-2.84□□□□□ -2.86
snR55snR55 ECM29P38737 1868 aa-2.85□□□□□ -2.87
snR55snR55 HUR1P45820 110 aa-2.85□□□□□ -2.87
snR55snR55 RBL2P48606 106 aaKnown RBP-2.86□□□□□ -2.87
snR55snR55 TIM8P57744 87 aa-2.86□□□□□ -2.87
snR55snR55 YIR021W-AQ3E739 70 aa-2.86□□□□□ -2.87
snR55snR55 UBC5P15732 148 aa-2.87□□□□□ -2.87
snR55snR55 YNR034W-AQ3E841 98 aa-2.87□□□□□ -2.87
snR55snR55 EDC1P53080 175 aaPredicted RBP-2.88□□□□□ -2.87
snR55snR55 PAU20Q08322 120 aa-2.88□□□□□ -2.87
snR55snR55 SRB8P25648 1427 aa-2.89□□□□□ -2.87
snR55snR55 PAU19P0CE85 124 aa-2.9□□□□□ -2.87
snR55snR55 PAU3P25610 124 aa-2.9□□□□□ -2.87
snR55snR55 YCR099CP25657 155 aa-2.9□□□□□ -2.87
snR55snR55 YNL277W-AQ3E7Z0 62 aa-2.9□□□□□ -2.87
snR55snR55 YNL042W-BQ3E7Z2 85 aa-2.9□□□□□ -2.87
snR55snR55 SDH6Q3E785 79 aa-2.91□□□□□ -2.88
snR55snR55 YOR008C-AQ3E7B9 74 aa-2.91□□□□□ -2.88
snR55snR55 TDA2P40045 126 aa-2.92□□□□□ -2.88
snR55snR55 DAD1Q12248 94 aa-2.92□□□□□ -2.88
snR55snR55 YBR201C-AQ2V2Q3 67 aa-2.92□□□□□ -2.88
snR55snR55 YKL018C-AQ3E7A7 99 aa-2.92□□□□□ -2.88
snR55snR55 PAU6P0CE90 120 aa-2.93□□□□□ -2.88
snR55snR55 PAU18P0CE91 120 aa-2.93□□□□□ -2.88
Retrieved 100 of 5,963 RNA–protein pairs in 274 ms