RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W THG1P53215 237 aaKnown RBP1.06□□□□□ -2.24
CTF4YPR135W RPL26BP53221 127 aaKnown RBP1.06□□□□□ -2.24
CTF4YPR135W ATG41Q12048 136 aa1.06□□□□□ -2.24
CTF4YPR135W TAR1Q8TGM6 124 aa1.06□□□□□ -2.24
CTF4YPR135W ATG40Q99325 256 aa1.06□□□□□ -2.24
CTF4YPR135W SFT2P38166 215 aa1.05□□□□□ -2.24
CTF4YPR135W YEL067CP39978 195 aa1.05□□□□□ -2.24
CTF4YPR135W NSE4P43124 402 aa1.05□□□□□ -2.24
CTF4YPR135W ERG25P53045 309 aa1.05□□□□□ -2.24
CTF4YPR135W MPC1P53157 130 aaKnown RBP1.05□□□□□ -2.24
CTF4YPR135W YCL001W-AP87012 153 aa1.05□□□□□ -2.24
CTF4YPR135W YPR013CQ12145 317 aa1.05□□□□□ -2.24
CTF4YPR135W ANB1P19211 157 aa1.05□□□□□ -2.24
CTF4YPR135W YHL018WP38744 120 aaPredicted RBP1.05□□□□□ -2.24
CTF4YPR135W YGL230CP53074 147 aa1.05□□□□□ -2.24
CTF4YPR135W CWC27Q02770 301 aa1.05□□□□□ -2.24
CTF4YPR135W FCF2Q12035 217 aaPredicted RBP1.05□□□□□ -2.24
CTF4YPR135W YCL001W-BQ96VH2 84 aa1.05□□□□□ -2.24
CTF4YPR135W TMA19P35691 167 aaKnown RBP1.04□□□□□ -2.24
CTF4YPR135W ERV15P38312 142 aa1.04□□□□□ -2.24
CTF4YPR135W UPS3Q04006 179 aa1.04□□□□□ -2.24
CTF4YPR135W RRT7Q07829 113 aa1.04□□□□□ -2.24
CTF4YPR135W RAD28Q12021 506 aa1.04□□□□□ -2.24
CTF4YPR135W COX8P04039 78 aa1.04□□□□□ -2.24
CTF4YPR135W SEC11P15367 167 aa1.04□□□□□ -2.24
CTF4YPR135W FYV5P25585 152 aa1.04□□□□□ -2.24
CTF4YPR135W KNH1P50112 268 aa1.04□□□□□ -2.24
CTF4YPR135W POP3P53833 195 aaPredicted RBP1.04□□□□□ -2.24
CTF4YPR135W DAD4P69851 72 aa1.04□□□□□ -2.24
CTF4YPR135W FIT2Q08906 153 aa1.04□□□□□ -2.24
CTF4YPR135W PRM7Q12459 698 aa1.04□□□□□ -2.24
CTF4YPR135W CMC4Q3E7A9 73 aa1.04□□□□□ -2.24
CTF4YPR135W MHF2Q3E829 80 aa1.04□□□□□ -2.24
CTF4YPR135W YKR045CP36138 183 aa1.03□□□□□ -2.24
CTF4YPR135W PAM16P42949 149 aa1.03□□□□□ -2.24
CTF4YPR135W ELP6Q04868 273 aa1.03□□□□□ -2.24
CTF4YPR135W SOM1Q05676 74 aa1.03□□□□□ -2.24
CTF4YPR135W ZEO1Q08245 113 aa1.03□□□□□ -2.24
CTF4YPR135W PEX4P29340 183 aa1.03□□□□□ -2.24
CTF4YPR135W YKL044WP36092 106 aa1.03□□□□□ -2.24
CTF4YPR135W CCS1P40202 249 aaKnown RBP1.03□□□□□ -2.24
CTF4YPR135W LSM8P47093 109 aaKnown RBP1.02□□□□□ -2.25
CTF4YPR135W EMP24P32803 203 aaKnown RBP1.02□□□□□ -2.25
CTF4YPR135W QCR10P37299 77 aa1.02□□□□□ -2.25
CTF4YPR135W SNF11P38956 169 aa1.02□□□□□ -2.25
CTF4YPR135W YGR269WP40326 108 aa1.02□□□□□ -2.25
CTF4YPR135W YAE1P47118 141 aaPredicted RBP1.02□□□□□ -2.25
CTF4YPR135W CUE4Q04201 117 aaPredicted RBP1.02□□□□□ -2.25
CTF4YPR135W AVO2Q04749 426 aa1.02□□□□□ -2.25
CTF4YPR135W KTI11Q3E840 82 aa1.02□□□□□ -2.25
CTF4YPR135W MED11Q99278 115 aa1.02□□□□□ -2.25
CTF4YPR135W UBC5P15732 148 aa1.02□□□□□ -2.25
CTF4YPR135W YHR022CP38763 256 aa1.02□□□□□ -2.25
CTF4YPR135W SVP26P38869 228 aa1.02□□□□□ -2.25
CTF4YPR135W YMR103CQ04436 120 aa1.02□□□□□ -2.25
CTF4YPR135W RPL13AQ12690 199 aaPredicted RBP1.02□□□□□ -2.25
CTF4YPR135W YBR209WP38311 105 aa1.01□□□□□ -2.25
CTF4YPR135W YHR130CP38834 111 aa1.01□□□□□ -2.25
CTF4YPR135W YEA6P39953 335 aa1.01□□□□□ -2.25
CTF4YPR135W SPG1P50088 95 aa1.01□□□□□ -2.25
CTF4YPR135W CYT2Q00873 224 aa1.01□□□□□ -2.25
CTF4YPR135W YML079WQ03629 201 aa1.01□□□□□ -2.25
CTF4YPR135W NMA1Q06178 401 aaKnown RBP1.01□□□□□ -2.25
CTF4YPR135W SCP1Q08873 200 aa1.01□□□□□ -2.25
CTF4YPR135W YDL012CQ12489 107 aa1.01□□□□□ -2.25
CTF4YPR135W YBR090CP38253 122 aa1.01□□□□□ -2.25
CTF4YPR135W YJL144WP47009 104 aa1.01□□□□□ -2.25
CTF4YPR135W PAU12P53343 120 aa1.01□□□□□ -2.25
CTF4YPR135W GPI19Q04082 140 aa1.01□□□□□ -2.25
CTF4YPR135W KEI1Q06346 221 aa1.01□□□□□ -2.25
CTF4YPR135W RTC6O14464 93 aa1□□□□□ -2.25
CTF4YPR135W HAP3P13434 144 aa1□□□□□ -2.25
CTF4YPR135W GNA1P43577 159 aaPredicted RBP1□□□□□ -2.25
CTF4YPR135W SGF11Q03067 99 aa1□□□□□ -2.25
CTF4YPR135W SML1Q04964 104 aa1□□□□□ -2.25
CTF4YPR135W YGL194C-AQ2V2P6 80 aa1□□□□□ -2.25
CTF4YPR135W HYP2P23301 157 aaKnown RBP1□□□□□ -2.25
CTF4YPR135W HPA3P39979 161 aa1□□□□□ -2.25
CTF4YPR135W TDA2P40045 126 aa1□□□□□ -2.25
CTF4YPR135W ERV14P53173 138 aa1□□□□□ -2.25
CTF4YPR135W VAM10Q08474 114 aa1□□□□□ -2.25
CTF4YPR135W YCR075W-AQ3E830 75 aa1□□□□□ -2.25
CTF4YPR135W SEC59P20048 519 aa0.99□□□□□ -2.25
CTF4YPR135W IPT1P38954 527 aa0.99□□□□□ -2.25
CTF4YPR135W DCV1P43595 202 aa0.99□□□□□ -2.25
CTF4YPR135W YGL149WP53116 101 aa0.99□□□□□ -2.25
CTF4YPR135W EMC6Q12431 108 aa0.99□□□□□ -2.25
CTF4YPR135W YKL068W-AQ3E826 78 aa0.99□□□□□ -2.25
CTF4YPR135W PAU21P0CE86 164 aa0.99□□□□□ -2.25
CTF4YPR135W PAU22P0CE87 164 aa0.99□□□□□ -2.25
CTF4YPR135W FUN14P18411 198 aa0.99□□□□□ -2.25
CTF4YPR135W PAU2P32612 120 aa0.99□□□□□ -2.25
CTF4YPR135W DAN1P47178 298 aa0.99□□□□□ -2.25
CTF4YPR135W BRP1P53194 125 aa0.99□□□□□ -2.25
CTF4YPR135W ATP19P81451 68 aa0.99□□□□□ -2.25
CTF4YPR135W YPR153WQ06537 140 aa0.99□□□□□ -2.25
CTF4YPR135W YDL157CQ12082 118 aa0.99□□□□□ -2.25
CTF4YPR135W YLR365WQ7LIF2 110 aa0.99□□□□□ -2.25
CTF4YPR135W MIC10Q96VH5 97 aa0.99□□□□□ -2.25
CTF4YPR135W MRPL38P35996 138 aaPredicted RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms