RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W VHS2P40463 436 aa5.35□□□□□ -1.55
SMK1YPR054W IMP2P46972 177 aa5.35□□□□□ -1.55
SMK1YPR054W CAX4P53223 239 aa5.35□□□□□ -1.55
SMK1YPR054W AIM11P87275 137 aa5.35□□□□□ -1.55
SMK1YPR054W MRPL23Q12487 163 aaPredicted RBP5.35□□□□□ -1.55
SMK1YPR054W YHL042WP38729 150 aa5.34□□□□□ -1.55
SMK1YPR054W YFL015CP43578 164 aa5.34□□□□□ -1.55
SMK1YPR054W KNH1P50112 268 aa5.34□□□□□ -1.55
SMK1YPR054W YMR181CQ03231 154 aa5.34□□□□□ -1.55
SMK1YPR054W YDR029WQ12111 104 aa5.34□□□□□ -1.55
SMK1YPR054W KTI12P34253 313 aaKnown RBP5.33□□□□□ -1.56
SMK1YPR054W UTH1P36135 365 aa5.33□□□□□ -1.56
SMK1YPR054W MRPL39P36533 70 aa5.33□□□□□ -1.56
SMK1YPR054W SMP1P38128 452 aa5.33□□□□□ -1.56
SMK1YPR054W MTC6P38849 526 aa5.33□□□□□ -1.56
SMK1YPR054W SGN1P40561 250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SMK1YPR054W CDC26P14724 124 aa5.32□□□□□ -1.56
SMK1YPR054W RRT1P38192 103 aa5.32□□□□□ -1.56
SMK1YPR054W GLE2P40066 365 aa5.32□□□□□ -1.56
SMK1YPR054W PIR5P46999 287 aa5.32□□□□□ -1.56
SMK1YPR054W AIM34Q03673 198 aa5.32□□□□□ -1.56
SMK1YPR054W YDR381C-AQ3E6R5 114 aa5.32□□□□□ -1.56
SMK1YPR054W YOR032W-AQ8TGS1 66 aa5.32□□□□□ -1.56
SMK1YPR054W PRP8P33334 2413 aaKnown RBP5.32□□□□□ -1.56
SMK1YPR054W INO2P26798 304 aa5.31□□□□□ -1.56
SMK1YPR054W IRC23Q08416 157 aa5.31□□□□□ -1.56
SMK1YPR054W PRM7Q12459 698 aa5.31□□□□□ -1.56
SMK1YPR054W YPL038W-AQ3E7B4 63 aa5.31□□□□□ -1.56
SMK1YPR054W TOM6P33448 61 aa5.3□□□□□ -1.56
SMK1YPR054W YKR045CP36138 183 aa5.3□□□□□ -1.56
SMK1YPR054W YJL027CP47063 138 aaPredicted RBP5.3□□□□□ -1.56
SMK1YPR054W GLO1P50107 326 aa5.3□□□□□ -1.56
SMK1YPR054W YOR008C-AQ3E7B9 74 aa5.3□□□□□ -1.56
SMK1YPR054W CSF1Q12150 2958 aa5.3□□□□□ -1.56
SMK1YPR054W CCW14O13547 238 aa5.29□□□□□ -1.56
SMK1YPR054W YBR121C-AP0C5L4 52 aa5.29□□□□□ -1.56
SMK1YPR054W PBI2P0CT04 75 aaKnown RBP5.29□□□□□ -1.56
SMK1YPR054W LDB16P25587 256 aa5.29□□□□□ -1.56
SMK1YPR054W SIP18P50263 79 aa5.29□□□□□ -1.56
SMK1YPR054W SHH4Q06236 168 aa5.29□□□□□ -1.56
SMK1YPR054W RPL28P02406 149 aaKnown RBP5.28□□□□□ -1.56
SMK1YPR054W ATP15P21306 62 aa5.28□□□□□ -1.56
SMK1YPR054W AIM19P40502 157 aa5.28□□□□□ -1.56
SMK1YPR054W BNA1P47096 177 aa5.28□□□□□ -1.56
SMK1YPR054W SBH1P52870 82 aa5.28□□□□□ -1.56
SMK1YPR054W MRPS12P53732 153 aa5.28□□□□□ -1.56
SMK1YPR054W YDR209CQ03480 137 aa5.28□□□□□ -1.56
SMK1YPR054W YOR029WQ12243 111 aa5.28□□□□□ -1.56
SMK1YPR054W RPS28BP0C0X0 67 aaKnown RBP5.27□□□□□ -1.57
SMK1YPR054W RPL2AP0CX45 254 aaKnown RBP5.27□□□□□ -1.57
SMK1YPR054W RPL2BP0CX46 254 aaKnown RBP5.27□□□□□ -1.57
SMK1YPR054W RNH203Q12338 110 aa5.27□□□□□ -1.57
SMK1YPR054W RPS28AQ3E7X9 67 aaPredicted RBP5.27□□□□□ -1.57
SMK1YPR054W RPL42AP0CX27 106 aaKnown RBP5.26□□□□□ -1.57
SMK1YPR054W RPL42BP0CX28 106 aaKnown RBP5.26□□□□□ -1.57
SMK1YPR054W LTP1P40347 161 aa5.26□□□□□ -1.57
SMK1YPR054W YNL190WP53872 204 aa5.26□□□□□ -1.57
SMK1YPR054W PBA1Q05778 276 aa5.26□□□□□ -1.57
SMK1YPR054W YMR105W-AQ8TGS8 64 aa5.26□□□□□ -1.57
SMK1YPR054W RPL18AP0CX49 186 aaKnown RBP5.24□□□□□ -1.57
SMK1YPR054W RPL18BP0CX50 186 aaKnown RBP5.24□□□□□ -1.57
SMK1YPR054W YCR050CP25630 102 aa5.24□□□□□ -1.57
SMK1YPR054W MPC2P38857 129 aa5.24□□□□□ -1.57
SMK1YPR054W SVP26P38869 228 aa5.24□□□□□ -1.57
SMK1YPR054W PEX17P40155 199 aa5.24□□□□□ -1.57
SMK1YPR054W RPL39P04650 51 aa5.23□□□□□ -1.57
SMK1YPR054W YHL018WP38744 120 aaPredicted RBP5.23□□□□□ -1.57
SMK1YPR054W SIM1P40472 476 aa5.23□□□□□ -1.57
SMK1YPR054W DCV1P43595 202 aa5.23□□□□□ -1.57
SMK1YPR054W UBC11P52492 156 aa5.23□□□□□ -1.57
SMK1YPR054W YOL160WQ08321 113 aa5.23□□□□□ -1.57
SMK1YPR054W EMC6Q12431 108 aa5.23□□□□□ -1.57
SMK1YPR054W MSA2P36157 363 aa5.22□□□□□ -1.57
SMK1YPR054W ERG28P40030 148 aa5.22□□□□□ -1.57
SMK1YPR054W YJR146WP47174 117 aa5.22□□□□□ -1.57
SMK1YPR054W GAT3Q07928 141 aa5.22□□□□□ -1.57
SMK1YPR054W ADH5P38113 351 aaKnown RBP5.21□□□□□ -1.58
SMK1YPR054W YSY6P38374 65 aa5.21□□□□□ -1.58
SMK1YPR054W HUR1P45820 110 aa5.21□□□□□ -1.58
SMK1YPR054W MRPL38P35996 138 aaPredicted RBP5.2□□□□□ -1.58
SMK1YPR054W ALG13P53178 202 aa5.2□□□□□ -1.58
SMK1YPR054W TRP1P00912 224 aa5.19□□□□□ -1.58
SMK1YPR054W RPS23AP0CX29 145 aaKnown RBP5.19□□□□□ -1.58
SMK1YPR054W RPS23BP0CX30 145 aa5.19□□□□□ -1.58
SMK1YPR054W RPL16AP26784 199 aaKnown RBP5.19□□□□□ -1.58
SMK1YPR054W RRT13P40042 185 aa5.19□□□□□ -1.58
SMK1YPR054W YNL234WP53857 426 aa5.19□□□□□ -1.58
SMK1YPR054W KTI11Q3E840 82 aa5.19□□□□□ -1.58
SMK1YPR054W IES6P32617 166 aa5.18□□□□□ -1.58
SMK1YPR054W SHU1P38751 150 aa5.18□□□□□ -1.58
SMK1YPR054W YGR219WP53307 113 aa5.18□□□□□ -1.58
SMK1YPR054W NRM1P53718 249 aa5.18□□□□□ -1.58
SMK1YPR054W YPL278CQ08990 100 aa5.18□□□□□ -1.58
SMK1YPR054W UTP20P35194 2493 aaKnown RBP5.18□□□□□ -1.58
SMK1YPR054W RPL15AP05748 204 aaKnown RBP5.17□□□□□ -1.58
SMK1YPR054W RPL16BP26785 198 aaKnown RBP5.17□□□□□ -1.58
SMK1YPR054W POR2P40478 281 aa5.17□□□□□ -1.58
SMK1YPR054W MEC1P38111 2368 aa5.16□□□□□ -1.58
SMK1YPR054W QCR8P08525 94 aa5.16□□□□□ -1.58
SMK1YPR054W CTR2P38865 189 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms