RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W RPB11P38902 120 aa2.48□□□□□ -2.01
VPS17YOR132W YNL200CP40165 246 aaKnown RBP2.48□□□□□ -2.01
VPS17YOR132W FIT2Q08906 153 aa2.48□□□□□ -2.01
VPS17YOR132W YCL001W-BQ96VH2 84 aa2.48□□□□□ -2.01
VPS17YOR132W TIR1P10863 254 aa2.47□□□□□ -2.01
VPS17YOR132W FPR2P32472 135 aa2.47□□□□□ -2.01
VPS17YOR132W FZF1P32805 299 aa2.47□□□□□ -2.01
VPS17YOR132W VMA11P32842 164 aa2.47□□□□□ -2.01
VPS17YOR132W YKR045CP36138 183 aa2.47□□□□□ -2.01
VPS17YOR132W MRPL24P36525 258 aaPredicted RBP2.47□□□□□ -2.01
VPS17YOR132W LSM2P38203 95 aaKnown RBP2.47□□□□□ -2.01
VPS17YOR132W YHR125WP38831 101 aa2.47□□□□□ -2.01
VPS17YOR132W CTR2P38865 189 aa2.47□□□□□ -2.01
VPS17YOR132W VTC1P40046 129 aaRIP-Chip data2.47□□□□□ -2.01not detected
VPS17YOR132W YER181CP40097 107 aa2.47□□□□□ -2.01
VPS17YOR132W YGR039WP53225 103 aa2.47□□□□□ -2.01
VPS17YOR132W TOM7P53507 60 aa2.47□□□□□ -2.01
VPS17YOR132W SAE3P89114 91 aa2.47□□□□□ -2.01
VPS17YOR132W FCF1Q05498 189 aaPredicted RBP2.47□□□□□ -2.01
VPS17YOR132W CSI2Q08054 341 aa2.47□□□□□ -2.01
VPS17YOR132W ATO3Q12359 275 aa2.47□□□□□ -2.01
VPS17YOR132W YLR412C-AQ3E742 68 aa2.47□□□□□ -2.01
VPS17YOR132W RPS23AP0CX29 145 aaKnown RBP2.47□□□□□ -2.01
VPS17YOR132W RPS23BP0CX30 145 aa2.47□□□□□ -2.01
VPS17YOR132W PAU16P35994 123 aa2.47□□□□□ -2.01
VPS17YOR132W YHL037CP38733 133 aa2.47□□□□□ -2.01
VPS17YOR132W FYV4P38783 130 aaPredicted RBP2.47□□□□□ -2.01
VPS17YOR132W YHR173CP38864 112 aa2.47□□□□□ -2.01
VPS17YOR132W YER188WP40103 239 aa2.47□□□□□ -2.01
VPS17YOR132W ATP19P81451 68 aa2.47□□□□□ -2.01
VPS17YOR132W FYV12Q08559 129 aa2.47□□□□□ -2.01
VPS17YOR132W YDL157CQ12082 118 aa2.47□□□□□ -2.01
VPS17YOR132W YIR021W-AQ3E739 70 aa2.47□□□□□ -2.01
VPS17YOR132W RPS22BQ3E7Y3 130 aaKnown RBP2.47□□□□□ -2.01
VPS17YOR132W TOR2P32600 2474 aaKnown RBP2.46□□□□□ -2.02
VPS17YOR132W HMRA1P0CY11 126 aa2.46□□□□□ -2.02
VPS17YOR132W HSP12P22943 109 aaKnown RBP2.46□□□□□ -2.02
VPS17YOR132W YBR220CP38318 560 aa2.46□□□□□ -2.02
VPS17YOR132W LST8P41318 303 aa2.46□□□□□ -2.02
VPS17YOR132W BRP1P53194 125 aa2.46□□□□□ -2.02
VPS17YOR132W SED1Q01589 338 aa2.46□□□□□ -2.02
VPS17YOR132W SMD1Q02260 146 aaPredicted RBP2.46□□□□□ -2.02
VPS17YOR132W SEN1Q00416 2231 aaKnown RBP2.46□□□□□ -2.02
VPS17YOR132W YAR023CD6VPM8 179 aa2.45□□□□□ -2.02
VPS17YOR132W SEC11P15367 167 aa2.45□□□□□ -2.02
VPS17YOR132W YBL071CP38185 102 aa2.45□□□□□ -2.02
VPS17YOR132W YMR141CP40211 102 aa2.45□□□□□ -2.02
VPS17YOR132W ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
VPS17YOR132W YGL193CP53097 103 aa2.45□□□□□ -2.02
VPS17YOR132W YDR274CP87283 123 aa2.45□□□□□ -2.02
VPS17YOR132W FSF1Q12029 327 aaKnown RBP2.45□□□□□ -2.02
VPS17YOR132W FCY1Q12178 158 aa2.45□□□□□ -2.02
VPS17YOR132W SCS22Q6Q595 175 aa2.45□□□□□ -2.02
VPS17YOR132W MRPL31P14063 131 aaPredicted RBP2.44□□□□□ -2.02
VPS17YOR132W PHO85P17157 305 aa2.44□□□□□ -2.02
VPS17YOR132W UTR5P32630 166 aa2.44□□□□□ -2.02
VPS17YOR132W YRA2P36036 203 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VPS17YOR132W SFT2P38166 215 aa2.44□□□□□ -2.02
VPS17YOR132W YHR140WP38842 239 aa2.44□□□□□ -2.02
VPS17YOR132W YGL230CP53074 147 aa2.44□□□□□ -2.02
VPS17YOR132W MIX17Q03667 156 aa2.44□□□□□ -2.02
VPS17YOR132W PAU23Q07987 124 aa2.44□□□□□ -2.02
VPS17YOR132W PAU17Q12370 124 aa2.44□□□□□ -2.02
VPS17YOR132W YHR032W-AP0C5N6 59 aa2.44□□□□□ -2.02
VPS17YOR132W YHR213WP0CI67 198 aa2.44□□□□□ -2.02
VPS17YOR132W HAP3P13434 144 aa2.44□□□□□ -2.02
VPS17YOR132W YFR045WP43617 309 aa2.44□□□□□ -2.02
VPS17YOR132W IRC23Q08416 157 aa2.44□□□□□ -2.02
VPS17YOR132W YNL277W-AQ3E7Z0 62 aa2.44□□□□□ -2.02
VPS17YOR132W TRA1P38811 3744 aa2.43□□□□□ -2.02
VPS17YOR132W YBR056W-AI2HB52 66 aa2.43□□□□□ -2.02
VPS17YOR132W SFT1P43682 97 aa2.43□□□□□ -2.02
VPS17YOR132W IMP2P46972 177 aa2.43□□□□□ -2.02
VPS17YOR132W POP3P53833 195 aaPredicted RBP2.43□□□□□ -2.02
VPS17YOR132W TVP18Q04767 167 aa2.43□□□□□ -2.02
VPS17YOR132W YCL048W-AQ2V2Q2 79 aa2.43□□□□□ -2.02
VPS17YOR132W DDI2P0CH63 225 aa2.42□□□□□ -2.02
VPS17YOR132W DDI3P0CH64 225 aa2.42□□□□□ -2.02
VPS17YOR132W YKR070WP36151 352 aaKnown RBP2.42□□□□□ -2.02
VPS17YOR132W MSL1P40567 111 aaPredicted RBP2.42□□□□□ -2.02
VPS17YOR132W YJL027CP47063 138 aaPredicted RBP2.42□□□□□ -2.02
VPS17YOR132W SBH1P52870 82 aa2.42□□□□□ -2.02
VPS17YOR132W DAD4P69851 72 aa2.42□□□□□ -2.02
VPS17YOR132W UPS3Q04006 179 aa2.42□□□□□ -2.02
VPS17YOR132W YOR268CQ08734 132 aa2.42□□□□□ -2.02
VPS17YOR132W GCN1P33892 2672 aaKnown RBP2.42□□□□□ -2.02
VPS17YOR132W YKR032WP36127 104 aa2.41□□□□□ -2.02
VPS17YOR132W SNU13P39990 126 aaKnown RBP2.41□□□□□ -2.02
VPS17YOR132W THG1P53215 237 aaKnown RBP2.41□□□□□ -2.02
VPS17YOR132W YNR064CP53750 290 aa2.41□□□□□ -2.02
VPS17YOR132W YIL014C-AQ02598 104 aa2.41□□□□□ -2.02
VPS17YOR132W RRT1P38192 103 aa2.41□□□□□ -2.02
VPS17YOR132W PAU7P39545 55 aa2.41□□□□□ -2.02
VPS17YOR132W YGR017WP53210 297 aa2.41□□□□□ -2.02
VPS17YOR132W MPC3P53311 146 aa2.41□□□□□ -2.02
VPS17YOR132W CWC27Q02770 301 aa2.41□□□□□ -2.02
VPS17YOR132W ATP20Q12233 115 aa2.41□□□□□ -2.02
VPS17YOR132W DAD1Q12248 94 aa2.41□□□□□ -2.02
VPS17YOR132W PRE1P22141 198 aaKnown RBP2.4□□□□□ -2.03
VPS17YOR132W YGR025WP53216 100 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms