RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C PAU9Q3E770 120 aa2.63□□□□□ -1.99
VPS21YOR089C RPS25AQ3E792 108 aaPredicted RBP2.63□□□□□ -1.99
VPS21YOR089C SEC59P20048 519 aa2.62□□□□□ -1.99
VPS21YOR089C YHP1Q04116 353 aa2.62□□□□□ -1.99
VPS21YOR089C YCL048W-AQ2V2Q2 79 aa2.62□□□□□ -1.99
VPS21YOR089C YOS1Q3E834 85 aa2.62□□□□□ -1.99
VPS21YOR089C ATP5P09457 212 aa2.61□□□□□ -1.99
VPS21YOR089C PHO85P17157 305 aa2.61□□□□□ -1.99
VPS21YOR089C FPR2P32472 135 aa2.61□□□□□ -1.99
VPS21YOR089C YKR045CP36138 183 aa2.61□□□□□ -1.99
VPS21YOR089C YBR013CP38215 129 aa2.61□□□□□ -1.99
VPS21YOR089C TRS20P38334 175 aa2.61□□□□□ -1.99
VPS21YOR089C YER135CP40082 130 aa2.61□□□□□ -1.99
VPS21YOR089C YNL200CP40165 246 aaKnown RBP2.61□□□□□ -1.99
VPS21YOR089C YJR015WP47090 510 aa2.61□□□□□ -1.99
VPS21YOR089C ZEO1Q08245 113 aa2.61□□□□□ -1.99
VPS21YOR089C YPR013CQ12145 317 aa2.61□□□□□ -1.99
VPS21YOR089C RPL2AP0CX45 254 aaKnown RBP2.6□□□□□ -1.99
VPS21YOR089C RPL2BP0CX46 254 aaKnown RBP2.6□□□□□ -1.99
VPS21YOR089C SRP21P32342 167 aa2.6□□□□□ -1.99
VPS21YOR089C RRT1P38192 103 aa2.6□□□□□ -1.99
VPS21YOR089C CSH1P38287 376 aa2.6□□□□□ -1.99
VPS21YOR089C YPT31P38555 223 aaKnown RBP2.6□□□□□ -1.99
VPS21YOR089C FYV4P38783 130 aaPredicted RBP2.6□□□□□ -1.99
VPS21YOR089C LST8P41318 303 aa2.6□□□□□ -1.99
VPS21YOR089C MIC27P50945 234 aa2.6□□□□□ -1.99
VPS21YOR089C YNR064CP53750 290 aa2.6□□□□□ -1.99
VPS21YOR089C YHR007C-AQ07074 71 aa2.6□□□□□ -1.99
VPS21YOR089C FYV12Q08559 129 aa2.6□□□□□ -1.99
VPS21YOR089C YHR086W-AQ3E746 53 aa2.6□□□□□ -1.99
VPS21YOR089C RPS22AP0C0W1 130 aaKnown RBP2.59□□□□□ -1.99
VPS21YOR089C NHP6AP11632 93 aaKnown RBP2.59□□□□□ -1.99
VPS21YOR089C ACP1P32463 125 aa2.59□□□□□ -1.99
VPS21YOR089C GSP2P32836 220 aaKnown RBP2.59□□□□□ -1.99
VPS21YOR089C YPL073CP40323 161 aa2.59□□□□□ -1.99
VPS21YOR089C GPI2P46961 280 aa2.59□□□□□ -1.99
VPS21YOR089C DAD4P69851 72 aa2.59□□□□□ -1.99
VPS21YOR089C PAU19P0CE85 124 aa2.58□□□□□ -2
VPS21YOR089C PAU21P0CE86 164 aa2.58□□□□□ -2
VPS21YOR089C PAU22P0CE87 164 aa2.58□□□□□ -2
VPS21YOR089C PAU3P25610 124 aa2.58□□□□□ -2
VPS21YOR089C HSP10P38910 106 aa2.58□□□□□ -2
VPS21YOR089C CYB5P40312 120 aa2.58□□□□□ -2
VPS21YOR089C YIL163CP40448 117 aa2.58□□□□□ -2
VPS21YOR089C YIR020CP40575 100 aa2.58□□□□□ -2
VPS21YOR089C PAU5P43575 122 aa2.58□□□□□ -2
VPS21YOR089C FMP49A0A023PZB3 126 aa2.57□□□□□ -2
VPS21YOR089C YRA2P36036 203 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
VPS21YOR089C YBL071CP38185 102 aa2.57□□□□□ -2
VPS21YOR089C IMP2P46972 177 aa2.57□□□□□ -2
VPS21YOR089C FIT2Q08906 153 aa2.57□□□□□ -2
VPS21YOR089C FCY1Q12178 158 aa2.57□□□□□ -2
VPS21YOR089C Q0297Q9ZZV8 51 aa2.57□□□□□ -2
VPS21YOR089C YHR213WP0CI67 198 aa2.56□□□□□ -2
VPS21YOR089C RPL43AP0CX25 92 aaKnown RBP2.56□□□□□ -2
VPS21YOR089C RPL43BP0CX26 92 aa2.56□□□□□ -2
VPS21YOR089C SFT2P38166 215 aa2.56□□□□□ -2
VPS21YOR089C LSM2P38203 95 aaKnown RBP2.56□□□□□ -2
VPS21YOR089C YBR090CP38253 122 aa2.56□□□□□ -2
VPS21YOR089C YHR173CP38864 112 aa2.56□□□□□ -2
VPS21YOR089C ATP19P81451 68 aa2.56□□□□□ -2
VPS21YOR089C APS2Q00381 147 aa2.56□□□□□ -2
VPS21YOR089C ARL3Q02804 198 aa2.56□□□□□ -2
VPS21YOR089C CSI2Q08054 341 aa2.56□□□□□ -2
VPS21YOR089C CUP1-1P0CX80 61 aa2.55□□□□□ -2
VPS21YOR089C CUP1-2P0CX81 61 aa2.55□□□□□ -2
VPS21YOR089C HSP12P22943 109 aaKnown RBP2.55□□□□□ -2
VPS21YOR089C YGL010WP25338 174 aa2.55□□□□□ -2
VPS21YOR089C BPH1P25356 2167 aa2.55□□□□□ -2
VPS21YOR089C URA2P07259 2214 aaKnown RBP2.54□□□□□ -2
VPS21YOR089C SUA7P29055 345 aaPredicted RBP2.54□□□□□ -2
VPS21YOR089C SSS1P35179 80 aa2.54□□□□□ -2
VPS21YOR089C MRPL38P35996 138 aaPredicted RBP2.54□□□□□ -2
VPS21YOR089C HUA1P40325 198 aa2.54□□□□□ -2
VPS21YOR089C YGL193CP53097 103 aa2.54□□□□□ -2
VPS21YOR089C THG1P53215 237 aaKnown RBP2.54□□□□□ -2
VPS21YOR089C TOM7P53507 60 aa2.54□□□□□ -2
VPS21YOR089C LIP1Q03579 150 aa2.54□□□□□ -2
VPS21YOR089C UPS3Q04006 179 aa2.54□□□□□ -2
VPS21YOR089C SDH7Q04401 133 aa2.54□□□□□ -2
VPS21YOR089C SEN15Q04675 128 aa2.54□□□□□ -2
VPS21YOR089C YOR105WQ08504 108 aa2.54□□□□□ -2
VPS21YOR089C YOR381W-AQ3E804 55 aa2.54□□□□□ -2
VPS21YOR089C COX8P04039 78 aa2.53□□□□□ -2
VPS21YOR089C HMRA1P0CY11 126 aa2.53□□□□□ -2
VPS21YOR089C POP7P38291 140 aa2.53□□□□□ -2
VPS21YOR089C YBR219CP38317 127 aa2.53□□□□□ -2
VPS21YOR089C FIP1P45976 327 aa2.53□□□□□ -2
VPS21YOR089C LSM8P47093 109 aaKnown RBP2.53□□□□□ -2
VPS21YOR089C YNR034W-AQ3E841 98 aa2.53□□□□□ -2
VPS21YOR089C YCL001W-BQ96VH2 84 aa2.53□□□□□ -2
VPS21YOR089C NUM1Q00402 2748 aa2.52□□□□□ -2.01
VPS21YOR089C MRPL31P14063 131 aaPredicted RBP2.52□□□□□ -2.01
VPS21YOR089C YHL018WP38744 120 aaPredicted RBP2.52□□□□□ -2.01
VPS21YOR089C SNU13P39990 126 aaKnown RBP2.52□□□□□ -2.01
VPS21YOR089C YER181CP40097 107 aa2.52□□□□□ -2.01
VPS21YOR089C YMR141CP40211 102 aa2.52□□□□□ -2.01
VPS21YOR089C SPI1P40092 148 aa2.51□□□□□ -2.01
VPS21YOR089C ERV14P53173 138 aa2.51□□□□□ -2.01
VPS21YOR089C YDR366CP87287 132 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 144.5 ms