RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A RRT1P38192 103 aa1.9□□□□□ -2.11
YSF3YNL138W-A SPC25P40014 221 aa1.9□□□□□ -2.11
YSF3YNL138W-A SPC1P46965 94 aa1.9□□□□□ -2.11
YSF3YNL138W-A SPG1P50088 95 aa1.9□□□□□ -2.11
YSF3YNL138W-A PAU12P53343 120 aa1.9□□□□□ -2.11
YSF3YNL138W-A ATP19P81451 68 aa1.9□□□□□ -2.11
YSF3YNL138W-A RRT7Q07829 113 aa1.9□□□□□ -2.11
YSF3YNL138W-A RAD28Q12021 506 aa1.9□□□□□ -2.11
YSF3YNL138W-A ATP20Q12233 115 aa1.9□□□□□ -2.11
YSF3YNL138W-A YPR108W-AQ3E7B3 70 aa1.9□□□□□ -2.11
YSF3YNL138W-A YLR307C-AQ3E825 87 aa1.9□□□□□ -2.11
YSF3YNL138W-A YLR365WQ7LIF2 110 aa1.9□□□□□ -2.11
YSF3YNL138W-A AHT1P29589 182 aa1.89□□□□□ -2.11
YSF3YNL138W-A UTP11P34247 250 aaPredicted RBP1.89□□□□□ -2.11
YSF3YNL138W-A YHR138CP38841 114 aaPredicted RBP1.89□□□□□ -2.11
YSF3YNL138W-A SMD3P43321 101 aaKnown RBP1.89□□□□□ -2.11
YSF3YNL138W-A YGL193CP53097 103 aa1.89□□□□□ -2.11
YSF3YNL138W-A SAE3P89114 91 aa1.89□□□□□ -2.11
YSF3YNL138W-A CWC27Q02770 301 aa1.89□□□□□ -2.11
YSF3YNL138W-A LCL1Q02786 101 aa1.89□□□□□ -2.11
YSF3YNL138W-A ELC1Q03071 99 aa1.89□□□□□ -2.11
YSF3YNL138W-A COA4Q05809 96 aa1.89□□□□□ -2.11
YSF3YNL138W-A RRT15Q3E811 62 aa1.89□□□□□ -2.11
YSF3YNL138W-A HUG1Q6Q5K6 68 aa1.89□□□□□ -2.11
YSF3YNL138W-A RTC6O14464 93 aa1.88□□□□□ -2.11
YSF3YNL138W-A RPL14AP36105 138 aaKnown RBP1.88□□□□□ -2.11
YSF3YNL138W-A PAU24P38155 120 aa1.88□□□□□ -2.11
YSF3YNL138W-A YBR209WP38311 105 aa1.88□□□□□ -2.11
YSF3YNL138W-A RPL14BP38754 138 aaKnown RBP1.88□□□□□ -2.11
YSF3YNL138W-A LSM8P47093 109 aaKnown RBP1.88□□□□□ -2.11
YSF3YNL138W-A TMA23Q03525 211 aa1.88□□□□□ -2.11
YSF3YNL138W-A LIP1Q03579 150 aa1.88□□□□□ -2.11
YSF3YNL138W-A YMR253CQ04835 414 aa1.88□□□□□ -2.11
YSF3YNL138W-A ZEO1Q08245 113 aa1.88□□□□□ -2.11
YSF3YNL138W-A YOR015WQ12169 119 aa1.88□□□□□ -2.11
YSF3YNL138W-A YLR118CQ12354 227 aa1.88□□□□□ -2.11
YSF3YNL138W-A YCR075W-AQ3E830 75 aa1.88□□□□□ -2.11
YSF3YNL138W-A KTI11Q3E840 82 aa1.88□□□□□ -2.11
YSF3YNL138W-A SPS2P08459 502 aa1.87□□□□□ -2.11
YSF3YNL138W-A SPT14P32363 452 aa1.87□□□□□ -2.11
YSF3YNL138W-A YHR140WP38842 239 aa1.87□□□□□ -2.11
YSF3YNL138W-A SVP26P38869 228 aa1.87□□□□□ -2.11
YSF3YNL138W-A RPB11P38902 120 aa1.87□□□□□ -2.11
YSF3YNL138W-A RPL33BP41056 107 aaKnown RBP1.87□□□□□ -2.11
YSF3YNL138W-A SBH1P52870 82 aa1.87□□□□□ -2.11
YSF3YNL138W-A DAD3P69850 94 aa1.87□□□□□ -2.11
YSF3YNL138W-A EST3Q03096 181 aa1.87□□□□□ -2.11
YSF3YNL138W-A ANT1Q06497 328 aa1.87□□□□□ -2.11
YSF3YNL138W-A YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
YSF3YNL138W-A PAU2P32612 120 aa1.86□□□□□ -2.11
YSF3YNL138W-A SFT1P43682 97 aa1.86□□□□□ -2.11
YSF3YNL138W-A THG1P53215 237 aaKnown RBP1.86□□□□□ -2.11
YSF3YNL138W-A MPC3P53311 146 aa1.86□□□□□ -2.11
YSF3YNL138W-A CUE4Q04201 117 aaPredicted RBP1.86□□□□□ -2.11
YSF3YNL138W-A TVP18Q04767 167 aa1.86□□□□□ -2.11
YSF3YNL138W-A YOR381W-AQ3E804 55 aa1.86□□□□□ -2.11
YSF3YNL138W-A SCS22Q6Q595 175 aa1.86□□□□□ -2.11
YSF3YNL138W-A DDI2P0CH63 225 aa1.85□□□□□ -2.11
YSF3YNL138W-A DDI3P0CH64 225 aa1.85□□□□□ -2.11
YSF3YNL138W-A FZF1P32805 299 aa1.85□□□□□ -2.11
YSF3YNL138W-A GSP1P32835 219 aaKnown RBP1.85□□□□□ -2.11
YSF3YNL138W-A GSP2P32836 220 aaKnown RBP1.85□□□□□ -2.11
YSF3YNL138W-A YBL071CP38185 102 aa1.85□□□□□ -2.11
YSF3YNL138W-A ERV15P38312 142 aa1.85□□□□□ -2.11
YSF3YNL138W-A YNL217WP40152 326 aa1.85□□□□□ -2.11
YSF3YNL138W-A YML079WQ03629 201 aa1.85□□□□□ -2.11
YSF3YNL138W-A EMC6Q12431 108 aa1.85□□□□□ -2.11
YSF3YNL138W-A YHR213WP0CI67 198 aa1.84□□□□□ -2.11
YSF3YNL138W-A PAM17P36147 197 aa1.84□□□□□ -2.11
YSF3YNL138W-A PHS1P40857 217 aa1.84□□□□□ -2.11
YSF3YNL138W-A IMP2P46972 177 aa1.84□□□□□ -2.11
YSF3YNL138W-A YGL258W-AQ3E740 77 aa1.84□□□□□ -2.11
YSF3YNL138W-A YLR236CA0A023PZG4 107 aa1.83□□□□□ -2.12
YSF3YNL138W-A HYP2P23301 157 aaKnown RBP1.83□□□□□ -2.12
YSF3YNL138W-A DAD4P69851 72 aa1.83□□□□□ -2.12
YSF3YNL138W-A FYV12Q08559 129 aa1.83□□□□□ -2.12
YSF3YNL138W-A YGR240C-AQ3E786 66 aa1.83□□□□□ -2.12
YSF3YNL138W-A INO4P13902 151 aa1.82□□□□□ -2.12
YSF3YNL138W-A SEC11P15367 167 aa1.82□□□□□ -2.12
YSF3YNL138W-A SFT2P38166 215 aa1.82□□□□□ -2.12
YSF3YNL138W-A YHR022CP38763 256 aa1.82□□□□□ -2.12
YSF3YNL138W-A UPS3Q04006 179 aa1.82□□□□□ -2.12
YSF3YNL138W-A YLR042CQ07990 161 aa1.82□□□□□ -2.12
YSF3YNL138W-A RPL33AP05744 107 aaKnown RBP1.81□□□□□ -2.12
YSF3YNL138W-A YCR050CP25630 102 aa1.81□□□□□ -2.12
YSF3YNL138W-A YKR070WP36151 352 aaKnown RBP1.81□□□□□ -2.12
YSF3YNL138W-A NSE4P43124 402 aa1.81□□□□□ -2.12
YSF3YNL138W-A POP3P53833 195 aaPredicted RBP1.81□□□□□ -2.12
YSF3YNL138W-A ATG41Q12048 136 aa1.81□□□□□ -2.12
YSF3YNL138W-A CCW12Q12127 133 aa1.81□□□□□ -2.12
YSF3YNL138W-A YKL068W-AQ3E826 78 aa1.81□□□□□ -2.12
YSF3YNL138W-A YCL001W-BQ96VH2 84 aa1.81□□□□□ -2.12
YSF3YNL138W-A VAR1P02381 398 aa1.8□□□□□ -2.12
YSF3YNL138W-A MRPL44P19956 98 aa1.8□□□□□ -2.12
YSF3YNL138W-A YNR077CP53758 84 aa1.8□□□□□ -2.12
YSF3YNL138W-A YAL064WP39711 94 aa1.79□□□□□ -2.12
YSF3YNL138W-A YGR269WP40326 108 aa1.79□□□□□ -2.12
YSF3YNL138W-A KNH1P50112 268 aa1.79□□□□□ -2.12
YSF3YNL138W-A YGL230CP53074 147 aa1.79□□□□□ -2.12
YSF3YNL138W-A YCL001W-AP87012 153 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms