RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT4	YNL101W	SIM1	P40472	476 aa		5.06	□□□□□ -1.6
AVT4	YNL101W	YGR018C	P53211	109 aa		5.06	□□□□□ -1.6
AVT4	YNL101W	TDA7	P53882	636 aa	Predicted RBP	5.06	□□□□□ -1.6
AVT4	YNL101W	MDM35	O60200	86 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	BET1	P22804	142 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	YER187W	P40102	141 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	HNT3	Q08702	217 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	YLR412C-A	Q3E742	68 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	GLT1	Q12680	2145 aa	Known RBP	5.05	□□□□□ -1.6
AVT4	YNL101W	YIL029C	P40538	142 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	SHH4	Q06236	168 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	GAT3	Q07928	141 aa		5.05	□□□□□ -1.6
AVT4	YNL101W	NIP7	Q08962	181 aa	Known RBP	5.05	□□□□□ -1.6
AVT4	YNL101W	RPL28	P02406	149 aa	Known RBP	5.04	□□□□□ -1.6
AVT4	YNL101W	YSY6	P38374	65 aa		5.04	□□□□□ -1.6
AVT4	YNL101W	YAR029W	P39549	74 aa		5.04	□□□□□ -1.6
AVT4	YNL101W	PCP1	P53259	346 aa		5.04	□□□□□ -1.6
AVT4	YNL101W	SDC1	Q03323	175 aa		5.04	□□□□□ -1.6
AVT4	YNL101W	NAG1	Q8TGN9	163 aa		5.03	□□□□□ -1.6
AVT4	YNL101W	YDR114C	Q04597	100 aa		5.03	□□□□□ -1.6
AVT4	YNL101W	RPL11B	Q3E757	174 aa	Predicted RBP	5.03	□□□□□ -1.6
AVT4	YNL101W	EMC6	Q12431	108 aa		5.02	□□□□□ -1.61
AVT4	YNL101W	RRT15	Q3E811	62 aa		5.02	□□□□□ -1.61
AVT4	YNL101W	RPL16B	P26785	198 aa	Known RBP	5.02	□□□□□ -1.61
AVT4	YNL101W	TOS6	P48560	102 aa		5.02	□□□□□ -1.61
AVT4	YNL101W	ATP15	P21306	62 aa		5.01	□□□□□ -1.61
AVT4	YNL101W	YFL019C	P43576	117 aa		5.01	□□□□□ -1.61
AVT4	YNL101W	YDR524C-B	Q3E6R4	66 aa		5.01	□□□□□ -1.61
AVT4	YNL101W	YBL071C	P38185	102 aa		5	□□□□□ -1.61
AVT4	YNL101W	YGR164W	P53291	111 aa		5	□□□□□ -1.61
AVT4	YNL101W	YNL277W-A	Q3E7Z0	62 aa		5	□□□□□ -1.61
AVT4	YNL101W	RPL11A	P0C0W9	174 aa	Known RBP	5	□□□□□ -1.61
AVT4	YNL101W	LDB16	P25587	256 aa		5	□□□□□ -1.61
AVT4	YNL101W	MTC6	P38849	526 aa		5	□□□□□ -1.61
AVT4	YNL101W	SPI1	P40092	148 aa		5	□□□□□ -1.61
AVT4	YNL101W	HAL1	Q01766	294 aa		5	□□□□□ -1.61
AVT4	YNL101W	MRPS12	P53732	153 aa		4.99	□□□□□ -1.61
AVT4	YNL101W	UBC4	P15731	148 aa		4.99	□□□□□ -1.61
AVT4	YNL101W	MPC2	P38857	129 aa		4.99	□□□□□ -1.61
AVT4	YNL101W	GLO1	P50107	326 aa		4.99	□□□□□ -1.61
AVT4	YNL101W	YDR246W-A	Q3E763	66 aa		4.99	□□□□□ -1.61
AVT4	YNL101W	MED6	P38782	295 aa		4.98	□□□□□ -1.61
AVT4	YNL101W	YML122C	Q03207	126 aa		4.98	□□□□□ -1.61
AVT4	YNL101W	YHR213W	P0CI67	198 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	RPS26B	P39939	119 aa	Known RBP	4.97	□□□□□ -1.61
AVT4	YNL101W	SUT1	P53032	299 aa	Known RBP	4.97	□□□□□ -1.61
AVT4	YNL101W	YOR268C	Q08734	132 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	YLR342W-A	Q3E810	57 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	TDA8	Q6B2U8	126 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	FAS1	P07149	2051 aa	Known RBP	4.97	□□□□□ -1.61
AVT4	YNL101W	YFL015C	P43578	164 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	PPT2	Q12036	173 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	YLR285C-A	Q3E771	56 aa		4.97	□□□□□ -1.61
AVT4	YNL101W	REE1	P40893	198 aa		4.96	□□□□□ -1.62
AVT4	YNL101W	HUR1	P45820	110 aa		4.96	□□□□□ -1.62
AVT4	YNL101W	YOR008C-A	Q3E7B9	74 aa		4.96	□□□□□ -1.62
AVT4	YNL101W	MSA2	P36157	363 aa		4.95	□□□□□ -1.62
AVT4	YNL101W	DCV1	P43595	202 aa		4.95	□□□□□ -1.62
AVT4	YNL101W	IMP2	P46972	177 aa		4.95	□□□□□ -1.62
AVT4	YNL101W	BPH1	P25356	2167 aa		4.95	□□□□□ -1.62
AVT4	YNL101W	KRE9	P39005	276 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	RPS26A	P39938	119 aa	Known RBP	4.94	□□□□□ -1.62
AVT4	YNL101W	RPL15A	P05748	204 aa	Known RBP	4.94	□□□□□ -1.62
AVT4	YNL101W	YHR214C-D	P0CX93	97 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	PEX22	P39718	180 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	PIR5	P46999	287 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	MMS2	P53152	137 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	YOR034C-A	Q3E735	80 aa		4.94	□□□□□ -1.62
AVT4	YNL101W	YLR156W	P0CE96	114 aa		4.93	□□□□□ -1.62
AVT4	YNL101W	YLR159W	P0CE97	114 aa		4.93	□□□□□ -1.62
AVT4	YNL101W	YLR161W	P0CE98	114 aa		4.93	□□□□□ -1.62
AVT4	YNL101W	EDC1	P53080	175 aa	Predicted RBP	4.93	□□□□□ -1.62
AVT4	YNL101W	YHR022C	P38763	256 aa		4.93	□□□□□ -1.62
AVT4	YNL101W	ERI1	P62651	68 aa	Known RBP	4.93	□□□□□ -1.62
AVT4	YNL101W	PBP4	Q07362	185 aa	Known RBP	4.93	□□□□□ -1.62
AVT4	YNL101W	MIC10	Q96VH5	97 aa		4.93	□□□□□ -1.62
AVT4	YNL101W	SEN1	Q00416	2231 aa	Known RBP	4.92	□□□□□ -1.62
AVT4	YNL101W	AIM4	P38305	123 aa	Predicted RBP	4.92	□□□□□ -1.62
AVT4	YNL101W	RPS14B	P39516	138 aa	Known RBP	4.92	□□□□□ -1.62
AVT4	YNL101W	URM1	P40554	99 aa	Predicted RBP	4.92	□□□□□ -1.62
AVT4	YNL101W	PGU1	P47180	361 aa		4.92	□□□□□ -1.62
AVT4	YNL101W	ICY1	Q04329	127 aa		4.92	□□□□□ -1.62
AVT4	YNL101W	YKR045C	P36138	183 aa		4.91	□□□□□ -1.62
AVT4	YNL101W	YBL081W	P38180	368 aa	Known RBP	4.91	□□□□□ -1.62
AVT4	YNL101W	CTR2	P38865	189 aa		4.91	□□□□□ -1.62
AVT4	YNL101W	KEG1	P43614	200 aa		4.91	□□□□□ -1.62
AVT4	YNL101W	SNP1	Q00916	300 aa	Predicted RBP	4.91	□□□□□ -1.62
AVT4	YNL101W	YKR073C	P36153	106 aa		4.9	□□□□□ -1.62
AVT4	YNL101W	SHU1	P38751	150 aa		4.9	□□□□□ -1.62
AVT4	YNL101W	ATP20	Q12233	115 aa		4.9	□□□□□ -1.62
AVT4	YNL101W	CCW14	O13547	238 aa		4.9	□□□□□ -1.63
AVT4	YNL101W	SPS100	P13130	326 aa		4.9	□□□□□ -1.63
AVT4	YNL101W	FPR1	P20081	114 aa	Known RBP	4.9	□□□□□ -1.63
AVT4	YNL101W	YNL046W	P53956	172 aa		4.9	□□□□□ -1.63
AVT4	YNL101W	MIG3	P39943	394 aa		4.89	□□□□□ -1.63
AVT4	YNL101W	YJL027C	P47063	138 aa	Predicted RBP	4.89	□□□□□ -1.63
AVT4	YNL101W	RSM19	P53733	91 aa	Predicted RBP	4.88	□□□□□ -1.63
AVT4	YNL101W	IRA2	P19158	3079 aa		4.88	□□□□□ -1.63
AVT4	YNL101W	RPL16A	P26784	199 aa	Known RBP	4.88	□□□□□ -1.63
AVT4	YNL101W	RRT1	P38192	103 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms