RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W EMC6Q12431 108 aa3.17□□□□□ -1.9
ROT1YMR200W GCN2P15442 1659 aa3.17□□□□□ -1.9
ROT1YMR200W FAS1P07149 2051 aaKnown RBP3.16□□□□□ -1.9
ROT1YMR200W YJL197C-AP0C5P0 93 aa3.16□□□□□ -1.9
ROT1YMR200W SML1Q04964 104 aa3.16□□□□□ -1.9
ROT1YMR200W YLR296WQ05898 108 aa3.16□□□□□ -1.9
ROT1YMR200W YHR007C-AQ07074 71 aa3.16□□□□□ -1.9
ROT1YMR200W NUP188P52593 1655 aaKnown RBP3.16□□□□□ -1.9
ROT1YMR200W VMR1P38735 1592 aa3.16□□□□□ -1.9
ROT1YMR200W PDR5P33302 1511 aaKnown RBP3.15□□□□□ -1.9
ROT1YMR200W IML1P47170 1584 aa3.15□□□□□ -1.91
ROT1YMR200W ECM12O13529 151 aa3.14□□□□□ -1.91
ROT1YMR200W PAU2P32612 120 aa3.14□□□□□ -1.91
ROT1YMR200W YKR045CP36138 183 aa3.14□□□□□ -1.91
ROT1YMR200W ROM2P51862 1356 aaKnown RBP3.13□□□□□ -1.91
ROT1YMR200W FPR1P20081 114 aaKnown RBP3.13□□□□□ -1.91
ROT1YMR200W SRB6P32570 121 aa3.13□□□□□ -1.91
ROT1YMR200W RPL22BP56628 122 aaKnown RBP3.13□□□□□ -1.91
ROT1YMR200W SEN15Q04675 128 aa3.13□□□□□ -1.91
ROT1YMR200W RPB7P34087 171 aa3.12□□□□□ -1.91
ROT1YMR200W YIR020CP40575 100 aa3.12□□□□□ -1.91
ROT1YMR200W RSM19P53733 91 aaPredicted RBP3.12□□□□□ -1.91
ROT1YMR200W TY1B-NL2Q99337 1749 aaKnown RBP3.12□□□□□ -1.91
ROT1YMR200W RPL36BO14455 100 aaKnown RBP3.11□□□□□ -1.91
ROT1YMR200W RPL36AP05745 100 aaPredicted RBP3.11□□□□□ -1.91
ROT1YMR200W FMT1P32785 401 aa3.11□□□□□ -1.91
ROT1YMR200W PAU24P38155 120 aa3.11□□□□□ -1.91
ROT1YMR200W DSE2P38844 325 aa3.11□□□□□ -1.91
ROT1YMR200W SNN1P48232 102 aa3.11□□□□□ -1.91
ROT1YMR200W PCC1Q3E833 88 aa3.11□□□□□ -1.91
ROT1YMR200W PAU19P0CE85 124 aa3.1□□□□□ -1.91
ROT1YMR200W PAU3P25610 124 aa3.1□□□□□ -1.91
ROT1YMR200W YHR138CP38841 114 aaPredicted RBP3.1□□□□□ -1.91
ROT1YMR200W YIL014C-AQ02598 104 aa3.1□□□□□ -1.91
ROT1YMR200W YLR194CQ05777 254 aa3.1□□□□□ -1.91
ROT1YMR200W HRT1Q08273 121 aa3.1□□□□□ -1.91
ROT1YMR200W RRT15Q3E811 62 aa3.1□□□□□ -1.91
ROT1YMR200W QCR8P08525 94 aa3.09□□□□□ -1.91
ROT1YMR200W ATG8P38182 117 aaRIP-Chip data3.09□□□□□ -1.91not detected
ROT1YMR200W BCK1Q01389 1478 aa3.09□□□□□ -1.92
ROT1YMR200W YDR042CQ03205 200 aa3.08□□□□□ -1.92
ROT1YMR200W MHF1Q3E835 90 aa3.08□□□□□ -1.92
ROT1YMR200W USO1P25386 1790 aa3.07□□□□□ -1.92
ROT1YMR200W MLP1Q02455 1875 aaKnown RBP3.07□□□□□ -1.92
ROT1YMR200W SRX1P36077 127 aa3.07□□□□□ -1.92
ROT1YMR200W NRG2P38082 220 aa3.07□□□□□ -1.92
ROT1YMR200W COX23P38824 151 aa3.07□□□□□ -1.92
ROT1YMR200W RGM1Q00453 211 aa3.07□□□□□ -1.92
ROT1YMR200W FLO9P39712 1322 aa3.07□□□□□ -1.92
ROT1YMR200W YLR419WQ06698 1435 aaKnown RBP3.07□□□□□ -1.92
ROT1YMR200W YHR213WP0CI67 198 aa3.06□□□□□ -1.92
ROT1YMR200W PAU16P35994 123 aa3.06□□□□□ -1.92
ROT1YMR200W YBR027CP38220 110 aa3.06□□□□□ -1.92
ROT1YMR200W YHL005CP38752 130 aa3.06□□□□□ -1.92
ROT1YMR200W CYB5P40312 120 aa3.06□□□□□ -1.92
ROT1YMR200W PAU15P40585 124 aa3.06□□□□□ -1.92
ROT1YMR200W HPA2Q06592 156 aa3.06□□□□□ -1.92
ROT1YMR200W YDL012CQ12489 107 aa3.06□□□□□ -1.92
ROT1YMR200W SUS1Q6WNK7 96 aa3.06□□□□□ -1.92
ROT1YMR200W MIX17Q03667 156 aa3.05□□□□□ -1.92
ROT1YMR200W YLR363W-AQ3E747 85 aa3.05□□□□□ -1.92
ROT1YMR200W RIF1P29539 1916 aa3.04□□□□□ -1.92
ROT1YMR200W YPR096CO13587 100 aa3.04□□□□□ -1.92
ROT1YMR200W DAN1P47178 298 aa3.04□□□□□ -1.92
ROT1YMR200W TAR1Q8TGM6 124 aa3.04□□□□□ -1.92
ROT1YMR200W POR2P40478 281 aa3.03□□□□□ -1.92
ROT1YMR200W NUP192P47054 1683 aa3.03□□□□□ -1.92
ROT1YMR200W PFY1P07274 126 aa3.02□□□□□ -1.93
ROT1YMR200W YGL014C-AP0C5N1 53 aa3.02□□□□□ -1.93
ROT1YMR200W CWP2P43497 92 aa3.02□□□□□ -1.93
ROT1YMR200W GSC2P40989 1895 aa3.01□□□□□ -1.93
ROT1YMR200W LST8P41318 303 aa3.01□□□□□ -1.93
ROT1YMR200W SED1Q01589 338 aa3.01□□□□□ -1.93
ROT1YMR200W YMR175W-AQ3E766 64 aa3.01□□□□□ -1.93
ROT1YMR200W GCV3P39726 170 aaPredicted RBP3□□□□□ -1.93
ROT1YMR200W RSM18P40033 138 aa3□□□□□ -1.93
ROT1YMR200W YRF1-2P40105 1681 aa3□□□□□ -1.93
ROT1YMR200W YCR085WP25650 117 aa2.99□□□□□ -1.93
ROT1YMR200W YEL008WP40001 126 aa2.99□□□□□ -1.93
ROT1YMR200W VAM10Q08474 114 aa2.99□□□□□ -1.93
ROT1YMR200W ENV10Q99382 181 aa2.99□□□□□ -1.93
ROT1YMR200W RPL33AP05744 107 aaKnown RBP2.98□□□□□ -1.93
ROT1YMR200W RPA12P32529 125 aaKnown RBP2.98□□□□□ -1.93
ROT1YMR200W PAU5P43575 122 aa2.98□□□□□ -1.93
ROT1YMR200W ICY1Q04329 127 aa2.98□□□□□ -1.93
ROT1YMR200W PRM7Q12459 698 aa2.98□□□□□ -1.93
ROT1YMR200W YMR122CQ03879 124 aa2.97□□□□□ -1.93
ROT1YMR200W POC4Q12245 148 aaPredicted RBP2.97□□□□□ -1.93
ROT1YMR200W HMRA2P0CY13 119 aa2.96□□□□□ -1.94
ROT1YMR200W ROX3P25046 220 aa2.96□□□□□ -1.94
ROT1YMR200W YFL065CP43539 102 aa2.96□□□□□ -1.94
ROT1YMR200W IMP2P46972 177 aa2.96□□□□□ -1.94
ROT1YMR200W YMR321CQ04898 105 aa2.96□□□□□ -1.94
ROT1YMR200W YPR203WQ08994 102 aa2.96□□□□□ -1.94
ROT1YMR200W YHR213W-AQ8TGT4 77 aa2.96□□□□□ -1.94
ROT1YMR200W SNF2P22082 1703 aa2.96□□□□□ -1.94
ROT1YMR200W AIM4P38305 123 aaPredicted RBP2.95□□□□□ -1.94
ROT1YMR200W YBR219CP38317 127 aa2.95□□□□□ -1.94
ROT1YMR200W PRM3Q08931 133 aa2.95□□□□□ -1.94
ROT1YMR200W RPL22AP05749 121 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms