RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W AIM34Q03673 198 aa4.11□□□□□ -1.75
SPG4YMR107W YLR194CQ05777 254 aa4.11□□□□□ -1.75
SPG4YMR107W YDR246W-AQ3E763 66 aa4.11□□□□□ -1.75
SPG4YMR107W YMR175W-AQ3E766 64 aa4.11□□□□□ -1.75
SPG4YMR107W BET2P20133 325 aa4.1□□□□□ -1.75
SPG4YMR107W IES6P32617 166 aa4.1□□□□□ -1.75
SPG4YMR107W KTI12P34253 313 aaKnown RBP4.1□□□□□ -1.75
SPG4YMR107W MSA2P36157 363 aa4.1□□□□□ -1.75
SPG4YMR107W YGR025WP53216 100 aa4.1□□□□□ -1.75
SPG4YMR107W YNL234WP53857 426 aa4.1□□□□□ -1.75
SPG4YMR107W YNL190WP53872 204 aa4.1□□□□□ -1.75
SPG4YMR107W ABF2Q02486 183 aa4.1□□□□□ -1.75
SPG4YMR107W SHH4Q06236 168 aa4.1□□□□□ -1.75
SPG4YMR107W YOL160WQ08321 113 aa4.1□□□□□ -1.75
SPG4YMR107W YIL059CP40520 121 aa4.09□□□□□ -1.75
SPG4YMR107W ALG13P53178 202 aa4.09□□□□□ -1.75
SPG4YMR107W RPL11AP0C0W9 174 aaKnown RBP4.08□□□□□ -1.76
SPG4YMR107W MRPL39P36533 70 aa4.08□□□□□ -1.76
SPG4YMR107W YHL042WP38729 150 aa4.08□□□□□ -1.76
SPG4YMR107W YJR146WP47174 117 aa4.08□□□□□ -1.76
SPG4YMR107W KNH1P50112 268 aa4.08□□□□□ -1.76
SPG4YMR107W RPL11BQ3E757 174 aaPredicted RBP4.08□□□□□ -1.76
SPG4YMR107W ECM12O13529 151 aa4.07□□□□□ -1.76
SPG4YMR107W RPL42AP0CX27 106 aaKnown RBP4.07□□□□□ -1.76
SPG4YMR107W RPL42BP0CX28 106 aaKnown RBP4.07□□□□□ -1.76
SPG4YMR107W RPL2AP0CX45 254 aaKnown RBP4.07□□□□□ -1.76
SPG4YMR107W RPL2BP0CX46 254 aaKnown RBP4.07□□□□□ -1.76
SPG4YMR107W LDB16P25587 256 aa4.07□□□□□ -1.76
SPG4YMR107W TOM6P33448 61 aa4.07□□□□□ -1.76
SPG4YMR107W ADH5P38113 351 aaKnown RBP4.07□□□□□ -1.76
SPG4YMR107W VHS2P40463 436 aa4.07□□□□□ -1.76
SPG4YMR107W GLO1P50107 326 aa4.07□□□□□ -1.76
SPG4YMR107W YOR032W-AQ8TGS1 66 aa4.07□□□□□ -1.76
SPG4YMR107W CCW14O13547 238 aa4.06□□□□□ -1.76
SPG4YMR107W ATP15P21306 62 aa4.06□□□□□ -1.76
SPG4YMR107W SVP26P38869 228 aa4.06□□□□□ -1.76
SPG4YMR107W MIG3P39943 394 aa4.05□□□□□ -1.76
SPG4YMR107W WWM1P43582 211 aaKnown RBP4.05□□□□□ -1.76
SPG4YMR107W SIP18P50263 79 aa4.05□□□□□ -1.76
SPG4YMR107W YMR181CQ03231 154 aa4.05□□□□□ -1.76
SPG4YMR107W YOR008C-AQ3E7B9 74 aa4.05□□□□□ -1.76
SPG4YMR107W RPL28P02406 149 aaKnown RBP4.04□□□□□ -1.76
SPG4YMR107W PBI2P0CT04 75 aaKnown RBP4.04□□□□□ -1.76
SPG4YMR107W CDC26P14724 124 aa4.04□□□□□ -1.76
SPG4YMR107W SIM1P40472 476 aa4.04□□□□□ -1.76
SPG4YMR107W GAT4P40569 121 aa4.04□□□□□ -1.76
SPG4YMR107W COF1Q03048 143 aaKnown RBP4.04□□□□□ -1.76
SPG4YMR107W YML122CQ03207 126 aa4.04□□□□□ -1.76
SPG4YMR107W YDR029WQ12111 104 aa4.04□□□□□ -1.76
SPG4YMR107W RPL39P04650 51 aa4.03□□□□□ -1.76
SPG4YMR107W YBR121C-AP0C5L4 52 aa4.03□□□□□ -1.76
SPG4YMR107W INO2P26798 304 aa4.03□□□□□ -1.76
SPG4YMR107W YHL018WP38744 120 aaPredicted RBP4.03□□□□□ -1.76
SPG4YMR107W KRE9P39005 276 aa4.03□□□□□ -1.76
SPG4YMR107W LTP1P40347 161 aa4.03□□□□□ -1.76
SPG4YMR107W AIM19P40502 157 aa4.03□□□□□ -1.76
SPG4YMR107W SBH1P52870 82 aa4.03□□□□□ -1.76
SPG4YMR107W YDR209CQ03480 137 aa4.03□□□□□ -1.76
SPG4YMR107W PPT2Q12036 173 aa4.03□□□□□ -1.76
SPG4YMR107W SEN1Q00416 2231 aaKnown RBP4.02□□□□□ -1.77
SPG4YMR107W YCR050CP25630 102 aa4.02□□□□□ -1.77
SPG4YMR107W RPL16AP26784 199 aaKnown RBP4.02□□□□□ -1.77
SPG4YMR107W UTH1P36135 365 aa4.02□□□□□ -1.77
SPG4YMR107W RRT1P38192 103 aa4.02□□□□□ -1.77
SPG4YMR107W ERG28P40030 148 aa4.02□□□□□ -1.77
SPG4YMR107W YGR219WP53307 113 aa4.02□□□□□ -1.77
SPG4YMR107W RNH203Q12338 110 aa4.02□□□□□ -1.77
SPG4YMR107W YBR200W-AQ3E755 54 aa4.02□□□□□ -1.77
SPG4YMR107W RAD6P06104 172 aa4.01□□□□□ -1.77
SPG4YMR107W CTR2P38865 189 aa4.01□□□□□ -1.77
SPG4YMR107W YDR034W-BQ6Q5X2 51 aa4.01□□□□□ -1.77
SPG4YMR107W HFA1P32874 2273 aa4□□□□□ -1.77
SPG4YMR107W IRA1P18963 3092 aa4□□□□□ -1.77
SPG4YMR107W SHU1P38751 150 aa4□□□□□ -1.77
SPG4YMR107W MPC2P38857 129 aa4□□□□□ -1.77
SPG4YMR107W DCV1P43595 202 aa4□□□□□ -1.77
SPG4YMR107W PBP4Q07362 185 aaKnown RBP4□□□□□ -1.77
SPG4YMR107W KSH1Q8TGJ3 72 aa4□□□□□ -1.77
SPG4YMR107W YOL085CQ99345 113 aa4□□□□□ -1.77
SPG4YMR107W TRP1P00912 224 aa3.99□□□□□ -1.77
SPG4YMR107W RRT13P40042 185 aa3.99□□□□□ -1.77
SPG4YMR107W YER187WP40102 141 aa3.99□□□□□ -1.77
SPG4YMR107W PEX17P40155 199 aa3.99□□□□□ -1.77
SPG4YMR107W URM1P40554 99 aaPredicted RBP3.99□□□□□ -1.77
SPG4YMR107W PBA1Q05778 276 aa3.99□□□□□ -1.77
SPG4YMR107W YPR013CQ12145 317 aa3.99□□□□□ -1.77
SPG4YMR107W YHL037CP38733 133 aa3.98□□□□□ -1.77
SPG4YMR107W YHR022CP38763 256 aa3.98□□□□□ -1.77
SPG4YMR107W YGR164WP53291 111 aa3.98□□□□□ -1.77
SPG4YMR107W RGM1Q00453 211 aa3.98□□□□□ -1.77
SPG4YMR107W YDL009CQ12210 107 aa3.98□□□□□ -1.77
SPG4YMR107W TDA8Q6B2U8 126 aa3.98□□□□□ -1.77
SPG4YMR107W YLR236CA0A023PZG4 107 aa3.97□□□□□ -1.77
SPG4YMR107W RPL18AP0CX49 186 aaKnown RBP3.97□□□□□ -1.77
SPG4YMR107W RPL18BP0CX50 186 aaKnown RBP3.97□□□□□ -1.77
SPG4YMR107W YSY6P38374 65 aa3.97□□□□□ -1.77
SPG4YMR107W ARC15P40518 154 aaRIP-Chip data3.97□□□□□ -1.77not detected
SPG4YMR107W CCW12Q12127 133 aa3.97□□□□□ -1.77
SPG4YMR107W MRPL38P35996 138 aaPredicted RBP3.96□□□□□ -1.78
SPG4YMR107W HUR1P45820 110 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 107.1 ms