RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W SHH4Q06236 168 aa1.69□□□□□ -2.14
SMC6YLR383W FYV7Q12247 151 aa1.69□□□□□ -2.14
SMC6YLR383W YBL008W-AQ3E821 79 aa1.69□□□□□ -2.14
SMC6YLR383W YOS1Q3E834 85 aa1.69□□□□□ -2.14
SMC6YLR383W FMP49A0A023PZB3 126 aa1.69□□□□□ -2.14
SMC6YLR383W PRE5P40302 234 aaKnown RBP1.69□□□□□ -2.14
SMC6YLR383W LSM8P47093 109 aaKnown RBP1.69□□□□□ -2.14
SMC6YLR383W SDS23P53172 527 aa1.69□□□□□ -2.14
SMC6YLR383W YMR122W-AQ3E842 84 aa1.69□□□□□ -2.14
SMC6YLR383W LSM2P38203 95 aaKnown RBP1.68□□□□□ -2.14
SMC6YLR383W YGL194C-AQ2V2P6 80 aa1.68□□□□□ -2.14
SMC6YLR383W RPL29P05747 59 aaPredicted RBP1.68□□□□□ -2.14
SMC6YLR383W NTF2P33331 125 aaKnown RBP1.68□□□□□ -2.14
SMC6YLR383W SNN1P48232 102 aa1.68□□□□□ -2.14
SMC6YLR383W CNL1Q06333 122 aa1.68□□□□□ -2.14
SMC6YLR383W YOR105WQ08504 108 aa1.68□□□□□ -2.14
SMC6YLR383W TIM22Q12328 207 aa1.68□□□□□ -2.14
SMC6YLR383W YKL023C-AQ2V2P3 75 aa1.68□□□□□ -2.14
SMC6YLR383W YNL277W-AQ3E7Z0 62 aa1.68□□□□□ -2.14
SMC6YLR383W APS1P35181 156 aa1.68□□□□□ -2.14
SMC6YLR383W ATG8P38182 117 aaRIP-Chip data1.68□□□□□ -2.14not detected
SMC6YLR383W TEM1P38987 245 aa1.68□□□□□ -2.14
SMC6YLR383W PEX22P39718 180 aa1.68□□□□□ -2.14
SMC6YLR383W MIG3P39943 394 aa1.68□□□□□ -2.14
SMC6YLR383W RRT13P40042 185 aa1.68□□□□□ -2.14
SMC6YLR383W YFR045WP43617 309 aa1.68□□□□□ -2.14
SMC6YLR383W MCM22P47167 239 aa1.68□□□□□ -2.14
SMC6YLR383W ADD37Q03233 198 aa1.68□□□□□ -2.14
SMC6YLR383W YAL063C-AQ3E791 96 aa1.68□□□□□ -2.14
SMC6YLR383W SCM4P32564 187 aa1.67□□□□□ -2.14
SMC6YLR383W YBR090CP38253 122 aa1.67□□□□□ -2.14
SMC6YLR383W SPC1P46965 94 aa1.67□□□□□ -2.14
SMC6YLR383W ERV14P53173 138 aa1.67□□□□□ -2.14
SMC6YLR383W YGR039WP53225 103 aa1.67□□□□□ -2.14
SMC6YLR383W PAU16P35994 123 aa1.67□□□□□ -2.14
SMC6YLR383W YKL044WP36092 106 aa1.67□□□□□ -2.14
SMC6YLR383W YJR146WP47174 117 aa1.67□□□□□ -2.14
SMC6YLR383W SEC4P07560 215 aaKnown RBP1.66□□□□□ -2.14
SMC6YLR383W RPC10P40422 70 aa1.66□□□□□ -2.14
SMC6YLR383W SGF11Q03067 99 aa1.66□□□□□ -2.14
SMC6YLR383W PBA1Q05778 276 aa1.66□□□□□ -2.14
SMC6YLR383W YPR170W-BP0C5R9 85 aa1.66□□□□□ -2.14
SMC6YLR383W MIG1P27705 504 aa1.66□□□□□ -2.14
SMC6YLR383W YHR140WP38842 239 aa1.66□□□□□ -2.14
SMC6YLR383W CUE4Q04201 117 aaPredicted RBP1.66□□□□□ -2.14
SMC6YLR383W ECM19Q06011 112 aa1.66□□□□□ -2.14
SMC6YLR383W FCF2Q12035 217 aaPredicted RBP1.66□□□□□ -2.14
SMC6YLR383W SME1Q12330 94 aaPredicted RBP1.66□□□□□ -2.14
SMC6YLR383W HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
SMC6YLR383W Q0255P03881 472 aa1.66□□□□□ -2.14
SMC6YLR383W SEC11P15367 167 aa1.66□□□□□ -2.14
SMC6YLR383W YGL118CP53132 145 aa1.66□□□□□ -2.14
SMC6YLR383W ZEO1Q08245 113 aa1.66□□□□□ -2.14
SMC6YLR383W TSC3Q3E790 80 aa1.66□□□□□ -2.14
SMC6YLR383W RNP1P32385 249 aa1.65□□□□□ -2.14
SMC6YLR383W FZF1P32805 299 aa1.65□□□□□ -2.14
SMC6YLR383W YKR070WP36151 352 aaKnown RBP1.65□□□□□ -2.14
SMC6YLR383W MRPL28P36527 147 aa1.65□□□□□ -2.14
SMC6YLR383W IRC22P40006 225 aa1.65□□□□□ -2.14
SMC6YLR383W YER135CP40082 130 aa1.65□□□□□ -2.14
SMC6YLR383W SBH1P52870 82 aa1.65□□□□□ -2.14
SMC6YLR383W HAL1Q01766 294 aa1.65□□□□□ -2.14
SMC6YLR383W TVP18Q04767 167 aa1.65□□□□□ -2.14
SMC6YLR383W NAT3Q06504 195 aa1.65□□□□□ -2.14
SMC6YLR383W COA3Q3E7B2 85 aa1.65□□□□□ -2.14
SMC6YLR383W YCR075W-AQ3E830 75 aa1.65□□□□□ -2.14
SMC6YLR383W YHR139C-AO13536 103 aa1.65□□□□□ -2.15
SMC6YLR383W RAD6P06104 172 aa1.65□□□□□ -2.15
SMC6YLR383W URA5P13298 226 aaKnown RBP1.65□□□□□ -2.15
SMC6YLR383W OXA1P39952 402 aa1.65□□□□□ -2.15
SMC6YLR383W COF1Q03048 143 aaKnown RBP1.65□□□□□ -2.15
SMC6YLR383W DGA1Q08650 418 aa1.65□□□□□ -2.15
SMC6YLR383W FSF1Q12029 327 aaKnown RBP1.65□□□□□ -2.15
SMC6YLR383W YMR175W-AQ3E766 64 aa1.65□□□□□ -2.15
SMC6YLR383W YLR307C-AQ3E825 87 aa1.65□□□□□ -2.15
SMC6YLR383W MBF1O14467 151 aaKnown RBP1.65□□□□□ -2.15
SMC6YLR383W VMA21P41806 77 aa1.65□□□□□ -2.15
SMC6YLR383W CYT2Q00873 224 aa1.65□□□□□ -2.15
SMC6YLR383W DFM1Q12743 341 aaKnown RBP1.65□□□□□ -2.15
SMC6YLR383W ATP5P09457 212 aa1.64□□□□□ -2.15
SMC6YLR383W YGL230CP53074 147 aa1.64□□□□□ -2.15
SMC6YLR383W YDR115WQ04598 105 aa1.64□□□□□ -2.15
SMC6YLR383W PPT2Q12036 173 aa1.64□□□□□ -2.15
SMC6YLR383W YOR015WQ12169 119 aa1.64□□□□□ -2.15
SMC6YLR383W MRPL11P36521 249 aaPredicted RBP1.64□□□□□ -2.15
SMC6YLR383W SMP1P38128 452 aa1.64□□□□□ -2.15
SMC6YLR383W YPL073CP40323 161 aa1.64□□□□□ -2.15
SMC6YLR383W YNL190WP53872 204 aa1.64□□□□□ -2.15
SMC6YLR383W SMT3Q12306 101 aaKnown RBP1.64□□□□□ -2.15
SMC6YLR383W GLC8P41818 229 aa1.63□□□□□ -2.15
SMC6YLR383W YLR296WQ05898 108 aa1.63□□□□□ -2.15
SMC6YLR383W DAD1Q12248 94 aa1.63□□□□□ -2.15
SMC6YLR383W YOR020W-AQ3E824 90 aa1.63□□□□□ -2.15
SMC6YLR383W TDA8Q6B2U8 126 aa1.63□□□□□ -2.15
SMC6YLR383W YOR304C-AO14468 76 aa1.63□□□□□ -2.15
SMC6YLR383W HAP3P13434 144 aa1.63□□□□□ -2.15
SMC6YLR383W MRPL44P19956 98 aa1.63□□□□□ -2.15
SMC6YLR383W NSE4P43124 402 aa1.63□□□□□ -2.15
SMC6YLR383W MRPS12P53732 153 aa1.63□□□□□ -2.15
SMC6YLR383W IRC23Q08416 157 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 82 ms