RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W SCS22Q6Q595 175 aa1.36□□□□□ -2.19
VPS38YLR360W KSH1Q8TGJ3 72 aa1.36□□□□□ -2.19
VPS38YLR360W ENV10Q99382 181 aa1.36□□□□□ -2.19
VPS38YLR360W RAD6P06104 172 aa1.35□□□□□ -2.19
VPS38YLR360W YCR050CP25630 102 aa1.35□□□□□ -2.19
VPS38YLR360W CSH1P38287 376 aa1.35□□□□□ -2.19
VPS38YLR360W YBR292CP38357 123 aa1.35□□□□□ -2.19
VPS38YLR360W SNF11P38956 169 aa1.35□□□□□ -2.19
VPS38YLR360W KNH1P50112 268 aa1.35□□□□□ -2.19
VPS38YLR360W YGR164WP53291 111 aa1.35□□□□□ -2.19
VPS38YLR360W YNR077CP53758 84 aa1.35□□□□□ -2.19
VPS38YLR360W YMR252CQ04814 134 aa1.35□□□□□ -2.19
VPS38YLR360W YLR296WQ05898 108 aa1.35□□□□□ -2.19
VPS38YLR360W YMR175W-AQ3E766 64 aa1.35□□□□□ -2.19
VPS38YLR360W KTI11Q3E840 82 aa1.35□□□□□ -2.19
VPS38YLR360W IGO2Q9P305 131 aa1.35□□□□□ -2.19
VPS38YLR360W SEC16P48415 2195 aaKnown RBP1.34□□□□□ -2.19
VPS38YLR360W MAK31P23059 88 aa1.34□□□□□ -2.2
VPS38YLR360W YCR090CP25654 182 aaKnown RBP1.34□□□□□ -2.2
VPS38YLR360W RPL14AP36105 138 aaKnown RBP1.34□□□□□ -2.2
VPS38YLR360W YPL073CP40323 161 aa1.34□□□□□ -2.2
VPS38YLR360W GAT4P40569 121 aa1.34□□□□□ -2.2
VPS38YLR360W YDR042CQ03205 200 aa1.34□□□□□ -2.2
VPS38YLR360W GPI19Q04082 140 aa1.34□□□□□ -2.2
VPS38YLR360W RIM9Q04734 239 aa1.34□□□□□ -2.2
VPS38YLR360W ELP6Q04868 273 aa1.34□□□□□ -2.2
VPS38YLR360W RAF1Q06891 181 aa1.34□□□□□ -2.2
VPS38YLR360W YKL023C-AQ2V2P3 75 aa1.34□□□□□ -2.2
VPS38YLR360W RRT15Q3E811 62 aa1.34□□□□□ -2.2
VPS38YLR360W YFL041W-AQ3E817 63 aa1.34□□□□□ -2.2
VPS38YLR360W TDA8Q6B2U8 126 aa1.34□□□□□ -2.2
VPS38YLR360W ODC2Q99297 307 aa1.34□□□□□ -2.2
VPS38YLR360W PBI2P0CT04 75 aaKnown RBP1.33□□□□□ -2.2
VPS38YLR360W RPL30P14120 105 aaKnown RBP1.33□□□□□ -2.2
VPS38YLR360W UBC4P15731 148 aa1.33□□□□□ -2.2
VPS38YLR360W NHP2P32495 156 aaPredicted RBP1.33□□□□□ -2.2
VPS38YLR360W PAU24P38155 120 aa1.33□□□□□ -2.2
VPS38YLR360W YHL018WP38744 120 aaPredicted RBP1.33□□□□□ -2.2
VPS38YLR360W SYM1Q06563 197 aa1.33□□□□□ -2.2
VPS38YLR360W YDL180WQ12301 547 aa1.33□□□□□ -2.2
VPS38YLR360W YLR146W-AQ2V2P1 62 aa1.33□□□□□ -2.2
VPS38YLR360W PAU1P0CE88 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU14P0CE89 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU6P0CE90 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU18P0CE91 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU8P0CE92 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU11P0CE93 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU2P32612 120 aa1.32□□□□□ -2.2
VPS38YLR360W TOM6P33448 61 aa1.32□□□□□ -2.2
VPS38YLR360W YRA2P36036 203 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
VPS38YLR360W SFT2P38166 215 aa1.32□□□□□ -2.2
VPS38YLR360W PAU13P38725 120 aa1.32□□□□□ -2.2
VPS38YLR360W FIP1P45976 327 aa1.32□□□□□ -2.2
VPS38YLR360W GPI2P46961 280 aa1.32□□□□□ -2.2
VPS38YLR360W VPS55P47111 140 aa1.32□□□□□ -2.2
VPS38YLR360W EAF6P47128 113 aa1.32□□□□□ -2.2
VPS38YLR360W BRP1P53194 125 aa1.32□□□□□ -2.2
VPS38YLR360W PAU12P53343 120 aa1.32□□□□□ -2.2
VPS38YLR360W PAU4P53427 120 aa1.32□□□□□ -2.2
VPS38YLR360W YNR064CP53750 290 aa1.32□□□□□ -2.2
VPS38YLR360W PET191Q02772 108 aa1.32□□□□□ -2.2
VPS38YLR360W PAU10Q03050 120 aa1.32□□□□□ -2.2
VPS38YLR360W YML079WQ03629 201 aa1.32□□□□□ -2.2
VPS38YLR360W PAU20Q08322 120 aa1.32□□□□□ -2.2
VPS38YLR360W DAD1Q12248 94 aa1.32□□□□□ -2.2
VPS38YLR360W PAU9Q3E770 120 aa1.32□□□□□ -2.2
VPS38YLR360W YOR376W-AQ3E805 51 aa1.32□□□□□ -2.2
VPS38YLR360W YHR213WP0CI67 198 aa1.31□□□□□ -2.2
VPS38YLR360W AHT1P29589 182 aa1.31□□□□□ -2.2
VPS38YLR360W YNL200CP40165 246 aaKnown RBP1.31□□□□□ -2.2
VPS38YLR360W POP3P53833 195 aaPredicted RBP1.31□□□□□ -2.2
VPS38YLR360W COX12Q01519 83 aa1.31□□□□□ -2.2
VPS38YLR360W HPA2Q06592 156 aa1.31□□□□□ -2.2
VPS38YLR360W YOL160WQ08321 113 aa1.31□□□□□ -2.2
VPS38YLR360W YDR381C-AQ3E6R5 114 aa1.31□□□□□ -2.2
VPS38YLR360W TSC3Q3E790 80 aa1.31□□□□□ -2.2
VPS38YLR360W YPL038W-AQ3E7B4 63 aa1.31□□□□□ -2.2
VPS38YLR360W RPS22BQ3E7Y3 130 aaKnown RBP1.31□□□□□ -2.2
VPS38YLR360W COA2Q3E823 68 aa1.31□□□□□ -2.2
VPS38YLR360W MIC10Q96VH5 97 aa1.31□□□□□ -2.2
VPS38YLR360W POL2P21951 2222 aaKnown RBP1.3□□□□□ -2.2
VPS38YLR360W COX9P07255 59 aa1.3□□□□□ -2.2
VPS38YLR360W BET1P22804 142 aa1.3□□□□□ -2.2
VPS38YLR360W SPO13P23624 291 aa1.3□□□□□ -2.2
VPS38YLR360W YEL028WP39989 153 aa1.3□□□□□ -2.2
VPS38YLR360W YFL019CP43576 117 aa1.3□□□□□ -2.2
VPS38YLR360W YFR035CP43608 114 aa1.3□□□□□ -2.2
VPS38YLR360W SKI6P46948 246 aaPredicted RBP1.3□□□□□ -2.2
VPS38YLR360W BXI1P48558 297 aa1.3□□□□□ -2.2
VPS38YLR360W YIL014C-AQ02598 104 aa1.3□□□□□ -2.2
VPS38YLR360W SHH4Q06236 168 aa1.3□□□□□ -2.2
VPS38YLR360W YOR105WQ08504 108 aa1.3□□□□□ -2.2
VPS38YLR360W MPD1Q12404 318 aaKnown RBP1.3□□□□□ -2.2
VPS38YLR360W YDR246W-AQ3E763 66 aa1.3□□□□□ -2.2
VPS38YLR360W YHL042WP38729 150 aa1.29□□□□□ -2.2
VPS38YLR360W YEL067CP39978 195 aa1.29□□□□□ -2.2
VPS38YLR360W YER181CP40097 107 aa1.29□□□□□ -2.2
VPS38YLR360W RSM19P53733 91 aaPredicted RBP1.29□□□□□ -2.2
VPS38YLR360W MIX14Q04341 121 aa1.29□□□□□ -2.2
VPS38YLR360W LSM6Q06406 86 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms