RNA–Protein interactions for RNA: YKR047W

YKR047W, Transcript of Dubious open reading frame, yeastyeast

Gene YKR047W, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR047WYKR047W YKL068W-AQ3E826 78 aa2.09□□□□□ -2.07
YKR047WYKR047W SLH1P53327 1967 aaKnown RBP2.09□□□□□ -2.08
YKR047WYKR047W ADK1P07170 222 aaKnown RBP2.08□□□□□ -2.08
YKR047WYKR047W YLR042CQ07990 161 aa2.08□□□□□ -2.08
YKR047WYKR047W YPL225WQ08971 146 aaKnown RBP2.08□□□□□ -2.08
YKR047WYKR047W FCF2Q12035 217 aaPredicted RBP2.08□□□□□ -2.08
YKR047WYKR047W HAP2P06774 265 aa2.07□□□□□ -2.08
YKR047WYKR047W YCR099CP25657 155 aa2.07□□□□□ -2.08
YKR047WYKR047W GSP1P32835 219 aaKnown RBP2.07□□□□□ -2.08
YKR047WYKR047W AIM4P38305 123 aaPredicted RBP2.07□□□□□ -2.08
YKR047WYKR047W YOL013W-AP0C272 63 aaPredicted RBP2.06□□□□□ -2.08
YKR047WYKR047W YJL009WP47078 108 aa2.06□□□□□ -2.08
YKR047WYKR047W YOR072WQ08486 104 aa2.06□□□□□ -2.08
YKR047WYKR047W YAR029WP39549 74 aa2.05□□□□□ -2.08
YKR047WYKR047W RUB1Q03919 77 aa2.05□□□□□ -2.08
YKR047WYKR047W LCL2Q08045 131 aa2.05□□□□□ -2.08
YKR047WYKR047W BCK1Q01389 1478 aa2.05□□□□□ -2.08
YKR047WYKR047W RPA190P10964 1664 aaKnown RBP2.05□□□□□ -2.08
YKR047WYKR047W DNF3Q12674 1656 aa2.05□□□□□ -2.08
YKR047WYKR047W YJL197C-AP0C5P0 93 aa2.04□□□□□ -2.08
YKR047WYKR047W NUP188P52593 1655 aaKnown RBP2.04□□□□□ -2.08
YKR047WYKR047W TDA2P40045 126 aa2.03□□□□□ -2.08
YKR047WYKR047W PAM16P42949 149 aa2.03□□□□□ -2.08
YKR047WYKR047W MGR2Q02889 113 aa2.02□□□□□ -2.09
YKR047WYKR047W YLR194CQ05777 254 aa2.02□□□□□ -2.09
YKR047WYKR047W HPA2Q06592 156 aa2.02□□□□□ -2.09
YKR047WYKR047W RTR2Q12378 196 aa2.02□□□□□ -2.09
YKR047WYKR047W YSF3P0C074 85 aaPredicted RBP2.01□□□□□ -2.09
YKR047WYKR047W RPS22AP0C0W1 130 aaKnown RBP2.01□□□□□ -2.09
YKR047WYKR047W YER039C-AP0CD97 72 aa2.01□□□□□ -2.09
YKR047WYKR047W EMP24P32803 203 aaKnown RBP2.01□□□□□ -2.09
YKR047WYKR047W RPL37AP49166 88 aaKnown RBP2.01□□□□□ -2.09
YKR047WYKR047W RPS22BQ3E7Y3 130 aaKnown RBP2.01□□□□□ -2.09
YKR047WYKR047W YHR130CP38834 111 aa2□□□□□ -2.09
YKR047WYKR047W PAU12P53343 120 aa1.99□□□□□ -2.09
YKR047WYKR047W YIL014C-AQ02598 104 aa1.99□□□□□ -2.09
YKR047WYKR047W YPL261CQ08976 102 aa1.99□□□□□ -2.09
YKR047WYKR047W OST5Q92316 86 aa1.99□□□□□ -2.09
YKR047WYKR047W MLP1Q02455 1875 aaKnown RBP1.99□□□□□ -2.09
YKR047WYKR047W YER187WP40102 141 aa1.98□□□□□ -2.09
YKR047WYKR047W YRF1-1P0CX20 1796 aa1.98□□□□□ -2.09
YKR047WYKR047W YRF1-5P0CX21 1796 aa1.98□□□□□ -2.09
YKR047WYKR047W YRF1-8P0CX22 1796 aa1.98□□□□□ -2.09
YKR047WYKR047W USO1P25386 1790 aa1.98□□□□□ -2.09
YKR047WYKR047W TY1B-NL2Q99337 1749 aaKnown RBP1.97□□□□□ -2.09
YKR047WYKR047W TY4B-JP47024 1803 aa1.97□□□□□ -2.09
YKR047WYKR047W LHP1P33399 275 aaKnown RBP1.97□□□□□ -2.09
YKR047WYKR047W OCA6Q12454 224 aa1.97□□□□□ -2.09
YKR047WYKR047W MED11Q99278 115 aa1.97□□□□□ -2.09
YKR047WYKR047W RRP5Q05022 1729 aaKnown RBP1.97□□□□□ -2.09
YKR047WYKR047W YIL163CP40448 117 aa1.96□□□□□ -2.1
YKR047WYKR047W YRF1-2P40105 1681 aa1.96□□□□□ -2.1
YKR047WYKR047W APC1P53886 1748 aa1.95□□□□□ -2.1
YKR047WYKR047W YBR013CP38215 129 aa1.95□□□□□ -2.1
YKR047WYKR047W MIC27P50945 234 aa1.95□□□□□ -2.1
YKR047WYKR047W COA6Q3E846 104 aa1.95□□□□□ -2.1
YKR047WYKR047W YLR365WQ7LIF2 110 aa1.95□□□□□ -2.1
YKR047WYKR047W YER137CP40083 148 aaKnown RBP1.94□□□□□ -2.1
YKR047WYKR047W RPL22BP56628 122 aaKnown RBP1.94□□□□□ -2.1
YKR047WYKR047W FIT3Q08907 204 aa1.94□□□□□ -2.1
YKR047WYKR047W DAD1Q12248 94 aa1.94□□□□□ -2.1
YKR047WYKR047W RSF2P46974 1380 aa1.94□□□□□ -2.1
YKR047WYKR047W URB1P34241 1764 aaKnown RBP1.93□□□□□ -2.1
YKR047WYKR047W RPL22AP05749 121 aaKnown RBP1.93□□□□□ -2.1
YKR047WYKR047W POR2P40478 281 aa1.93□□□□□ -2.1
YKR047WYKR047W YGR164WP53291 111 aa1.93□□□□□ -2.1
YKR047WYKR047W PCC1Q3E833 88 aa1.93□□□□□ -2.1
YKR047WYKR047W SRX1P36077 127 aa1.92□□□□□ -2.1
YKR047WYKR047W HHY1P39982 102 aa1.92□□□□□ -2.1
YKR047WYKR047W SMX2P40204 77 aaKnown RBP1.92□□□□□ -2.1
YKR047WYKR047W COX23P38824 151 aa1.91□□□□□ -2.1
YKR047WYKR047W GTT1P40582 234 aa1.91□□□□□ -2.1
YKR047WYKR047W YHR213W-BQ8TGK1 99 aa1.91□□□□□ -2.1
YKR047WYKR047W BUD23P25627 275 aaPredicted RBP1.9□□□□□ -2.11
YKR047WYKR047W PAU2P32612 120 aa1.9□□□□□ -2.11
YKR047WYKR047W YBR032WP38223 100 aa1.9□□□□□ -2.11
YKR047WYKR047W RGI1P40043 161 aaPredicted RBP1.9□□□□□ -2.11
YKR047WYKR047W YIR020CP40575 100 aa1.9□□□□□ -2.11
YKR047WYKR047W SNN1P48232 102 aa1.9□□□□□ -2.11
YKR047WYKR047W RPS12P48589 143 aaKnown RBP1.9□□□□□ -2.11
YKR047WYKR047W YRF1-3P0CX14 1859 aa1.9□□□□□ -2.11
YKR047WYKR047W YRF1-7P0CX15 1859 aa1.9□□□□□ -2.11
YKR047WYKR047W MVB12P42939 101 aa1.89□□□□□ -2.11
YKR047WYKR047W SEC7P11075 2009 aaKnown RBP1.89□□□□□ -2.11
YKR047WYKR047W UTP10P42945 1769 aaKnown RBP1.88□□□□□ -2.11
YKR047WYKR047W PDX3P38075 228 aaKnown RBP1.88□□□□□ -2.11
YKR047WYKR047W PAU24P38155 120 aa1.88□□□□□ -2.11
YKR047WYKR047W GNA1P43577 159 aaPredicted RBP1.88□□□□□ -2.11
YKR047WYKR047W ICS3P47034 131 aa1.88□□□□□ -2.11
YKR047WYKR047W TY4B-HP0C2J7 1802 aa1.88□□□□□ -2.11
YKR047WYKR047W MRPL31P14063 131 aaPredicted RBP1.87□□□□□ -2.11
YKR047WYKR047W CYB5P40312 120 aa1.87□□□□□ -2.11
YKR047WYKR047W YLR285C-AQ3E771 56 aa1.87□□□□□ -2.11
YKR047WYKR047W HUG1Q6Q5K6 68 aa1.87□□□□□ -2.11
YKR047WYKR047W ENV10Q99382 181 aa1.87□□□□□ -2.11
YKR047WYKR047W HFA1P32874 2273 aa1.86□□□□□ -2.11
YKR047WYKR047W YEA6P39953 335 aa1.86□□□□□ -2.11
YKR047WYKR047W HUR1P45820 110 aa1.86□□□□□ -2.11
YKR047WYKR047W RPL37BP51402 88 aaKnown RBP1.85□□□□□ -2.11
YKR047WYKR047W SWC7Q06707 132 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms