RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YCR085WP25650 117 aa1.61□□□□□ -2.15
SNU114YKL173W PAU24P38155 120 aa1.61□□□□□ -2.15
SNU114YKL173W YHR180WP38868 163 aa1.61□□□□□ -2.15
SNU114YKL173W PEP8P40335 379 aa1.61□□□□□ -2.15
SNU114YKL173W YGL149WP53116 101 aa1.61□□□□□ -2.15
SNU114YKL173W MZM1Q03429 123 aaPredicted RBP1.61□□□□□ -2.15
SNU114YKL173W IRC19Q07843 230 aa1.61□□□□□ -2.15
SNU114YKL173W YOL131WQ08270 108 aa1.61□□□□□ -2.15
SNU114YKL173W YDR034W-BQ6Q5X2 51 aa1.61□□□□□ -2.15
SNU114YKL173W SUS1Q6WNK7 96 aa1.61□□□□□ -2.15
SNU114YKL173W BRR2P32639 2163 aaKnown RBP1.61□□□□□ -2.15
SNU114YKL173W MDM35O60200 86 aa1.61□□□□□ -2.15
SNU114YKL173W PAU19P0CE85 124 aa1.61□□□□□ -2.15
SNU114YKL173W PAU3P25610 124 aa1.61□□□□□ -2.15
SNU114YKL173W YNR077CP53758 84 aa1.61□□□□□ -2.15
SNU114YKL173W ELP6Q04868 273 aa1.61□□□□□ -2.15
SNU114YKL173W SOM1Q05676 74 aa1.61□□□□□ -2.15
SNU114YKL173W RPL40AP0CH08 128 aaKnown RBP1.61□□□□□ -2.15
SNU114YKL173W RPL40BP0CH09 128 aaKnown RBP1.61□□□□□ -2.15
SNU114YKL173W YHL018WP38744 120 aaPredicted RBP1.61□□□□□ -2.15
SNU114YKL173W YJL027CP47063 138 aaPredicted RBP1.61□□□□□ -2.15
SNU114YKL173W EMC6Q12431 108 aa1.61□□□□□ -2.15
SNU114YKL173W PRM3Q08931 133 aa1.6□□□□□ -2.15
SNU114YKL173W PAU21P0CE86 164 aa1.6□□□□□ -2.15
SNU114YKL173W PAU22P0CE87 164 aa1.6□□□□□ -2.15
SNU114YKL173W HSP10P38910 106 aa1.6□□□□□ -2.15
SNU114YKL173W GCV3P39726 170 aaPredicted RBP1.6□□□□□ -2.15
SNU114YKL173W MPC1P53157 130 aaKnown RBP1.6□□□□□ -2.15
SNU114YKL173W YIL014C-AQ02598 104 aa1.6□□□□□ -2.15
SNU114YKL173W YDR042CQ03205 200 aa1.6□□□□□ -2.15
SNU114YKL173W POC4Q12245 148 aaPredicted RBP1.6□□□□□ -2.15
SNU114YKL173W YIL134C-AQ45U18 67 aa1.6□□□□□ -2.15
SNU114YKL173W STF2P16965 84 aa1.59□□□□□ -2.15
SNU114YKL173W FZF1P32805 299 aa1.59□□□□□ -2.15
SNU114YKL173W YKR032WP36127 104 aa1.59□□□□□ -2.15
SNU114YKL173W NRG2P38082 220 aa1.59□□□□□ -2.15
SNU114YKL173W YHR138CP38841 114 aaPredicted RBP1.59□□□□□ -2.15
SNU114YKL173W YPL261CQ08976 102 aa1.59□□□□□ -2.15
SNU114YKL173W YLR363W-AQ3E747 85 aa1.59□□□□□ -2.15
SNU114YKL173W RPA12P32529 125 aaKnown RBP1.59□□□□□ -2.16
SNU114YKL173W ATG8P38182 117 aaRIP-Chip data1.59□□□□□ -2.16not detected
SNU114YKL173W IGO1P53897 168 aa1.59□□□□□ -2.16
SNU114YKL173W NAT5Q08689 176 aa1.59□□□□□ -2.16
SNU114YKL173W VPS68Q12016 184 aa1.59□□□□□ -2.16
SNU114YKL173W YDR524C-BQ3E6R4 66 aa1.59□□□□□ -2.16
SNU114YKL173W ENV10Q99382 181 aa1.59□□□□□ -2.16
SNU114YKL173W RPL26AP05743 127 aaKnown RBP1.58□□□□□ -2.16
SNU114YKL173W RPS25BP0C0T4 108 aaKnown RBP1.58□□□□□ -2.16
SNU114YKL173W ATX1P38636 73 aa1.58□□□□□ -2.16
SNU114YKL173W PAU5P43575 122 aa1.58□□□□□ -2.16
SNU114YKL173W BOL2P53082 120 aa1.58□□□□□ -2.16
SNU114YKL173W RPL26BP53221 127 aaKnown RBP1.58□□□□□ -2.16
SNU114YKL173W ATP19P81451 68 aa1.58□□□□□ -2.16
SNU114YKL173W MYO1P08964 1928 aa1.58□□□□□ -2.16
SNU114YKL173W PAU16P35994 123 aa1.58□□□□□ -2.16
SNU114YKL173W YER187WP40102 141 aa1.58□□□□□ -2.16
SNU114YKL173W HYR1P40581 163 aaKnown RBP1.58□□□□□ -2.16
SNU114YKL173W PAU15P40585 124 aa1.58□□□□□ -2.16
SNU114YKL173W HUR1P45820 110 aa1.58□□□□□ -2.16
SNU114YKL173W YHP1Q04116 353 aa1.58□□□□□ -2.16
SNU114YKL173W IRC23Q08416 157 aa1.58□□□□□ -2.16
SNU114YKL173W YPR145C-AQ2V2P0 78 aa1.58□□□□□ -2.16
SNU114YKL173W PCC1Q3E833 88 aa1.58□□□□□ -2.16
SNU114YKL173W FKS1P38631 1876 aaKnown RBP1.58□□□□□ -2.16
SNU114YKL173W YKR045CP36138 183 aa1.58□□□□□ -2.16
SNU114YKL173W VMA21P41806 77 aa1.58□□□□□ -2.16
SNU114YKL173W ATG41Q12048 136 aa1.58□□□□□ -2.16
SNU114YKL173W RPS22AP0C0W1 130 aaKnown RBP1.57□□□□□ -2.16
SNU114YKL173W ICY1Q04329 127 aa1.57□□□□□ -2.16
SNU114YKL173W MIX14Q04341 121 aa1.57□□□□□ -2.16
SNU114YKL173W YLR422WQ06409 1932 aa1.57□□□□□ -2.16
SNU114YKL173W TRA1P38811 3744 aa1.57□□□□□ -2.16
SNU114YKL173W MSB2P32334 1306 aa1.57□□□□□ -2.16
SNU114YKL173W LST8P41318 303 aa1.57□□□□□ -2.16
SNU114YKL173W YFL051CP43552 160 aa1.57□□□□□ -2.16
SNU114YKL173W YLR194CQ05777 254 aa1.57□□□□□ -2.16
SNU114YKL173W HFA1P32874 2273 aa1.56□□□□□ -2.16
SNU114YKL173W YHR213WP0CI67 198 aa1.56□□□□□ -2.16
SNU114YKL173W HMRA2P0CY13 119 aa1.56□□□□□ -2.16
SNU114YKL173W SVP26P38869 228 aa1.56□□□□□ -2.16
SNU114YKL173W DCV1P43595 202 aa1.56□□□□□ -2.16
SNU114YKL173W DAD4P69851 72 aa1.56□□□□□ -2.16
SNU114YKL173W CUE4Q04201 117 aaPredicted RBP1.56□□□□□ -2.16
SNU114YKL173W YPR195CQ06594 109 aa1.56□□□□□ -2.16
SNU114YKL173W RPS22BQ3E7Y3 130 aaKnown RBP1.56□□□□□ -2.16
SNU114YKL173W RSM18P40033 138 aa1.56□□□□□ -2.16
SNU114YKL173W RPS25AQ3E792 108 aaPredicted RBP1.56□□□□□ -2.16
SNU114YKL173W CUP1-1P0CX80 61 aa1.56□□□□□ -2.16
SNU114YKL173W CUP1-2P0CX81 61 aa1.56□□□□□ -2.16
SNU114YKL173W NHP2P32495 156 aaPredicted RBP1.56□□□□□ -2.16
SNU114YKL173W COX23P38824 151 aa1.56□□□□□ -2.16
SNU114YKL173W YGR269WP40326 108 aa1.56□□□□□ -2.16
SNU114YKL173W ICS3P47034 131 aa1.56□□□□□ -2.16
SNU114YKL173W RPL22BP56628 122 aaKnown RBP1.56□□□□□ -2.16
SNU114YKL173W YDR119W-AQ2V2P9 66 aa1.56□□□□□ -2.16
SNU114YKL173W YNR034W-AQ3E841 98 aa1.56□□□□□ -2.16
SNU114YKL173W RTC6O14464 93 aa1.55□□□□□ -2.16
SNU114YKL173W YBR292CP38357 123 aa1.55□□□□□ -2.16
SNU114YKL173W YEL067CP39978 195 aa1.55□□□□□ -2.16
SNU114YKL173W YML079WQ03629 201 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms