RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YKR070WP36151 352 aaKnown RBP1.16□□□□□ -2.22
SHE2YKL130C VMA7P39111 118 aa1.16□□□□□ -2.22
SHE2YKL130C PHS1P40857 217 aa1.16□□□□□ -2.22
SHE2YKL130C SFT1P43682 97 aa1.16□□□□□ -2.22
SHE2YKL130C TMA23Q03525 211 aa1.16□□□□□ -2.22
SHE2YKL130C VAM10Q08474 114 aa1.16□□□□□ -2.22
SHE2YKL130C POL2P21951 2222 aaKnown RBP1.15□□□□□ -2.23
SHE2YKL130C VAR1P02381 398 aa1.15□□□□□ -2.23
SHE2YKL130C AQY2P0CD90 149 aa1.15□□□□□ -2.23
SHE2YKL130C YHR212W-AP0CX91 67 aa1.15□□□□□ -2.23
SHE2YKL130C QCR10P37299 77 aa1.15□□□□□ -2.23
SHE2YKL130C YBR027CP38220 110 aa1.15□□□□□ -2.23
SHE2YKL130C TRS20P38334 175 aa1.15□□□□□ -2.23
SHE2YKL130C NCE101Q02820 53 aa1.15□□□□□ -2.23
SHE2YKL130C FRQ1Q06389 190 aa1.15□□□□□ -2.23
SHE2YKL130C IRA2P19158 3079 aa1.15□□□□□ -2.23
SHE2YKL130C SFT2P38166 215 aa1.14□□□□□ -2.23
SHE2YKL130C YHL037CP38733 133 aa1.14□□□□□ -2.23
SHE2YKL130C YAL064WP39711 94 aa1.14□□□□□ -2.23
SHE2YKL130C DCV1P43595 202 aa1.14□□□□□ -2.23
SHE2YKL130C SIP18P50263 79 aa1.14□□□□□ -2.23
SHE2YKL130C SAE3P89114 91 aa1.14□□□□□ -2.23
SHE2YKL130C WIP1Q2V2P8 89 aa1.14□□□□□ -2.23
SHE2YKL130C MHF2Q3E829 80 aa1.14□□□□□ -2.23
SHE2YKL130C HFA1P32874 2273 aa1.14□□□□□ -2.23
SHE2YKL130C FUN14P18411 198 aa1.13□□□□□ -2.23
SHE2YKL130C ATG8P38182 117 aaRIP-Chip data1.13□□□□□ -2.23not detected
SHE2YKL130C HSP10P38910 106 aa1.13□□□□□ -2.23
SHE2YKL130C RGI1P40043 161 aaPredicted RBP1.13□□□□□ -2.23
SHE2YKL130C SMX2P40204 77 aaKnown RBP1.13□□□□□ -2.23
SHE2YKL130C AIM11P87275 137 aa1.13□□□□□ -2.23
SHE2YKL130C APS2Q00381 147 aa1.13□□□□□ -2.23
SHE2YKL130C YPL067CQ02754 198 aa1.13□□□□□ -2.23
SHE2YKL130C RTR2Q12378 196 aa1.13□□□□□ -2.23
SHE2YKL130C YGR035W-AQ45U48 73 aa1.13□□□□□ -2.23
SHE2YKL130C Q0297Q9ZZV8 51 aa1.13□□□□□ -2.23
SHE2YKL130C YBR056W-AI2HB52 66 aa1.12□□□□□ -2.23
SHE2YKL130C SRL3P36167 246 aa1.12□□□□□ -2.23
SHE2YKL130C YFL051CP43552 160 aa1.12□□□□□ -2.23
SHE2YKL130C YGL149WP53116 101 aa1.12□□□□□ -2.23
SHE2YKL130C BRP1P53194 125 aa1.12□□□□□ -2.23
SHE2YKL130C SED1Q01589 338 aa1.12□□□□□ -2.23
SHE2YKL130C YMR007WQ03675 126 aa1.12□□□□□ -2.23
SHE2YKL130C FIT3Q08907 204 aa1.12□□□□□ -2.23
SHE2YKL130C YLR118CQ12354 227 aa1.12□□□□□ -2.23
SHE2YKL130C YLR099W-AQ3E798 87 aa1.12□□□□□ -2.23
SHE2YKL130C IRA1P18963 3092 aa1.12□□□□□ -2.23
SHE2YKL130C RPL33AP05744 107 aaKnown RBP1.11□□□□□ -2.23
SHE2YKL130C PAU21P0CE86 164 aa1.11□□□□□ -2.23
SHE2YKL130C PAU22P0CE87 164 aa1.11□□□□□ -2.23
SHE2YKL130C HAP3P13434 144 aa1.11□□□□□ -2.23
SHE2YKL130C ANB1P19211 157 aa1.11□□□□□ -2.23
SHE2YKL130C GAT4P40569 121 aa1.11□□□□□ -2.23
SHE2YKL130C YIR020CP40575 100 aa1.11□□□□□ -2.23
SHE2YKL130C SPC24Q04477 213 aa1.11□□□□□ -2.23
SHE2YKL130C CSF1Q12150 2958 aa1.11□□□□□ -2.23
SHE2YKL130C SEC59P20048 519 aa1.1□□□□□ -2.23
SHE2YKL130C MRPL11P36521 249 aaPredicted RBP1.1□□□□□ -2.23
SHE2YKL130C ERV14P53173 138 aa1.1□□□□□ -2.23
SHE2YKL130C AIM36Q03798 255 aa1.1□□□□□ -2.23
SHE2YKL130C YOR343CQ12484 108 aa1.1□□□□□ -2.23
SHE2YKL130C YGL014C-AP0C5N1 53 aa1.09□□□□□ -2.23
SHE2YKL130C YHR213WP0CI67 198 aa1.09□□□□□ -2.23
SHE2YKL130C UGX2P32772 223 aa1.09□□□□□ -2.23
SHE2YKL130C TIM12P32830 109 aa1.09□□□□□ -2.23
SHE2YKL130C RPB11P38902 120 aa1.09□□□□□ -2.23
SHE2YKL130C YAR064WP39563 99 aa1.09□□□□□ -2.23
SHE2YKL130C YMR122CQ03879 124 aa1.09□□□□□ -2.23
SHE2YKL130C SEN15Q04675 128 aa1.09□□□□□ -2.23
SHE2YKL130C IRC21Q04772 201 aa1.09□□□□□ -2.23
SHE2YKL130C YOL131WQ08270 108 aa1.09□□□□□ -2.23
SHE2YKL130C YCL048W-AQ2V2Q2 79 aa1.09□□□□□ -2.23
SHE2YKL130C YIR021W-AQ3E739 70 aa1.09□□□□□ -2.23
SHE2YKL130C PFY1P07274 126 aa1.08□□□□□ -2.24
SHE2YKL130C YIL102CP40488 101 aa1.08□□□□□ -2.24
SHE2YKL130C LST8P41318 303 aa1.08□□□□□ -2.24
SHE2YKL130C YLR296WQ05898 108 aa1.08□□□□□ -2.24
SHE2YKL130C FCF2Q12035 217 aaPredicted RBP1.08□□□□□ -2.24
SHE2YKL130C CCW12Q12127 133 aa1.08□□□□□ -2.24
SHE2YKL130C KTI11Q3E840 82 aa1.08□□□□□ -2.24
SHE2YKL130C STT4P37297 1900 aa1.07□□□□□ -2.24
SHE2YKL130C SLH1P53327 1967 aaKnown RBP1.07□□□□□ -2.24
SHE2YKL130C RPL36BO14455 100 aaKnown RBP1.07□□□□□ -2.24
SHE2YKL130C YOR304C-AO14468 76 aa1.07□□□□□ -2.24
SHE2YKL130C RPL39P04650 51 aa1.07□□□□□ -2.24
SHE2YKL130C RPL36AP05745 100 aaPredicted RBP1.07□□□□□ -2.24
SHE2YKL130C YCR101CP25607 182 aa1.07□□□□□ -2.24
SHE2YKL130C LHP1P33399 275 aaKnown RBP1.07□□□□□ -2.24
SHE2YKL130C UTP11P34247 250 aaPredicted RBP1.07□□□□□ -2.24
SHE2YKL130C YKL044WP36092 106 aa1.07□□□□□ -2.24
SHE2YKL130C GNA1P43577 159 aaPredicted RBP1.07□□□□□ -2.24
SHE2YKL130C PRM3Q08931 133 aa1.07□□□□□ -2.24
SHE2YKL130C YCR001WP25347 104 aa1.06□□□□□ -2.24
SHE2YKL130C YBR032WP38223 100 aa1.06□□□□□ -2.24
SHE2YKL130C SNF11P38956 169 aa1.06□□□□□ -2.24
SHE2YKL130C YNL122CP53921 115 aaPredicted RBP1.06□□□□□ -2.24
SHE2YKL130C ARL3Q02804 198 aa1.06□□□□□ -2.24
SHE2YKL130C COA4Q05809 96 aa1.06□□□□□ -2.24
SHE2YKL130C HOR7Q05827 59 aa1.06□□□□□ -2.24
SHE2YKL130C LCL2Q08045 131 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms