RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SPS100P13130 326 aa1.6□□□□□ -2.15
UFD4YKL010C ARO2P28777 376 aaKnown RBP1.6□□□□□ -2.15
UFD4YKL010C YER121WP40076 114 aa1.6□□□□□ -2.15
UFD4YKL010C FIP1P45976 327 aa1.6□□□□□ -2.15
UFD4YKL010C TAR1Q8TGM6 124 aa1.6□□□□□ -2.15
UFD4YKL010C IRA1P18963 3092 aa1.6□□□□□ -2.15
UFD4YKL010C IRA2P19158 3079 aa1.6□□□□□ -2.15
UFD4YKL010C DIF1O13577 133 aa1.6□□□□□ -2.15
UFD4YKL010C ANB1P19211 157 aa1.6□□□□□ -2.15
UFD4YKL010C RRT13P40042 185 aa1.6□□□□□ -2.15
UFD4YKL010C DCV1P43595 202 aa1.6□□□□□ -2.15
UFD4YKL010C DUO1P53168 247 aaKnown RBP1.6□□□□□ -2.15
UFD4YKL010C LSM6Q06406 86 aaKnown RBP1.6□□□□□ -2.15
UFD4YKL010C YDL241WQ07738 123 aa1.6□□□□□ -2.15
UFD4YKL010C YOR008C-AQ3E7B9 74 aa1.6□□□□□ -2.15
UFD4YKL010C Q0255P03881 472 aa1.59□□□□□ -2.15
UFD4YKL010C QCR8P08525 94 aa1.59□□□□□ -2.15
UFD4YKL010C MSA2P36157 363 aa1.59□□□□□ -2.15
UFD4YKL010C UBC11P52492 156 aa1.59□□□□□ -2.15
UFD4YKL010C PKR1Q03880 122 aaKnown RBP1.59□□□□□ -2.15
UFD4YKL010C FCY1Q12178 158 aa1.59□□□□□ -2.15
UFD4YKL010C RPL29P05747 59 aaPredicted RBP1.59□□□□□ -2.15
UFD4YKL010C RPL16AP26784 199 aaKnown RBP1.59□□□□□ -2.15
UFD4YKL010C RPL16BP26785 198 aaKnown RBP1.59□□□□□ -2.15
UFD4YKL010C GLO1P50107 326 aa1.59□□□□□ -2.15
UFD4YKL010C MST27P53176 234 aa1.59□□□□□ -2.15
UFD4YKL010C YGR025WP53216 100 aa1.59□□□□□ -2.15
UFD4YKL010C EOS1P53938 366 aa1.59□□□□□ -2.15
UFD4YKL010C YDR381C-AQ3E6R5 114 aa1.59□□□□□ -2.15
UFD4YKL010C YLR236CA0A023PZG4 107 aa1.59□□□□□ -2.16
UFD4YKL010C MPC2P38857 129 aa1.59□□□□□ -2.16
UFD4YKL010C YGR240C-AQ3E786 66 aa1.59□□□□□ -2.16
UFD4YKL010C VTC1P40046 129 aaRIP-Chip data1.58□□□□□ -2.16 RIP-Chip
UFD4YKL010C HUA1P40325 198 aa1.58□□□□□ -2.16
UFD4YKL010C MIC26P50087 233 aa1.58□□□□□ -2.16
UFD4YKL010C IRC25Q07951 179 aa1.58□□□□□ -2.16
UFD4YKL010C JID1Q12350 301 aa1.58□□□□□ -2.16
UFD4YKL010C YFR035CP43608 114 aa1.58□□□□□ -2.16
UFD4YKL010C DIA1P54005 336 aa1.58□□□□□ -2.16
UFD4YKL010C YOR020W-AQ3E824 90 aa1.58□□□□□ -2.16
UFD4YKL010C YBR126W-AQ8TGU7 68 aa1.58□□□□□ -2.16
UFD4YKL010C HYP2P23301 157 aaKnown RBP1.58□□□□□ -2.16
UFD4YKL010C RPL32P38061 130 aaKnown RBP1.58□□□□□ -2.16
UFD4YKL010C MIG3P39943 394 aa1.58□□□□□ -2.16
UFD4YKL010C YER181CP40097 107 aa1.58□□□□□ -2.16
UFD4YKL010C TMC1Q08422 150 aaPredicted RBP1.58□□□□□ -2.16
UFD4YKL010C RPL43AP0CX25 92 aaKnown RBP1.58□□□□□ -2.16
UFD4YKL010C RPL43BP0CX26 92 aa1.58□□□□□ -2.16
UFD4YKL010C RPL2AP0CX45 254 aaKnown RBP1.58□□□□□ -2.16
UFD4YKL010C RPL2BP0CX46 254 aaKnown RBP1.58□□□□□ -2.16
UFD4YKL010C HMRA2P0CY13 119 aa1.58□□□□□ -2.16
UFD4YKL010C SHU1P38751 150 aa1.58□□□□□ -2.16
UFD4YKL010C KRE9P39005 276 aa1.58□□□□□ -2.16
UFD4YKL010C COX14P39103 70 aa1.58□□□□□ -2.16
UFD4YKL010C TOA2P32774 122 aa1.57□□□□□ -2.16
UFD4YKL010C SPC29P33419 253 aa1.57□□□□□ -2.16
UFD4YKL010C SHH4Q06236 168 aa1.57□□□□□ -2.16
UFD4YKL010C UGX2P32772 223 aa1.57□□□□□ -2.16
UFD4YKL010C YKL069WP36088 180 aa1.57□□□□□ -2.16
UFD4YKL010C OXA1P39952 402 aa1.57□□□□□ -2.16
UFD4YKL010C ELC1Q03071 99 aa1.57□□□□□ -2.16
UFD4YKL010C RPA12P32529 125 aaKnown RBP1.57□□□□□ -2.16
UFD4YKL010C ERG28P40030 148 aa1.57□□□□□ -2.16
UFD4YKL010C YER135CP40082 130 aa1.57□□□□□ -2.16
UFD4YKL010C RPR2P40571 144 aa1.57□□□□□ -2.16
UFD4YKL010C YPL261CQ08976 102 aa1.57□□□□□ -2.16
UFD4YKL010C STF1P01098 86 aa1.56□□□□□ -2.16
UFD4YKL010C SNU13P39990 126 aaKnown RBP1.56□□□□□ -2.16
UFD4YKL010C YMR122W-AQ3E842 84 aa1.56□□□□□ -2.16
UFD4YKL010C YCR085WP25650 117 aa1.56□□□□□ -2.16
UFD4YKL010C RPB9P27999 122 aa1.56□□□□□ -2.16
UFD4YKL010C YEL008WP40001 126 aa1.56□□□□□ -2.16
UFD4YKL010C AIM19P40502 157 aa1.56□□□□□ -2.16
UFD4YKL010C YAL065CO13511 128 aa1.56□□□□□ -2.16
UFD4YKL010C NRG2P38082 220 aa1.56□□□□□ -2.16
UFD4YKL010C TOS8P53147 276 aa1.56□□□□□ -2.16
UFD4YKL010C VAM10Q08474 114 aa1.56□□□□□ -2.16
UFD4YKL010C PRM7Q12459 698 aa1.56□□□□□ -2.16
UFD4YKL010C YLR307C-AQ3E825 87 aa1.56□□□□□ -2.16
UFD4YKL010C TEL1P38110 2787 aa1.56□□□□□ -2.16
UFD4YKL010C YBR219CP38317 127 aa1.56□□□□□ -2.16
UFD4YKL010C ERI1P62651 68 aaKnown RBP1.56□□□□□ -2.16
UFD4YKL010C YDR274CP87283 123 aa1.56□□□□□ -2.16
UFD4YKL010C RGM1Q00453 211 aa1.56□□□□□ -2.16
UFD4YKL010C RRG8Q06109 277 aa1.56□□□□□ -2.16
UFD4YKL010C YOL085CQ99345 113 aa1.56□□□□□ -2.16
UFD4YKL010C SCS22Q6Q595 175 aa1.55□□□□□ -2.16
UFD4YKL010C KEG1P43614 200 aa1.55□□□□□ -2.16
UFD4YKL010C OST2P46964 130 aa1.55□□□□□ -2.16
UFD4YKL010C YPS5P53057 165 aa1.55□□□□□ -2.16
UFD4YKL010C YMR181CQ03231 154 aa1.55□□□□□ -2.16
UFD4YKL010C YFL041W-AQ3E817 63 aa1.55□□□□□ -2.16
UFD4YKL010C ISD11Q6Q560 94 aa1.55□□□□□ -2.16
UFD4YKL010C RPL33AP05744 107 aaKnown RBP1.55□□□□□ -2.16
UFD4YKL010C RPL33BP41056 107 aaKnown RBP1.55□□□□□ -2.16
UFD4YKL010C ALG13P53178 202 aa1.55□□□□□ -2.16
UFD4YKL010C ATP23P53722 227 aa1.55□□□□□ -2.16
UFD4YKL010C WIP1Q2V2P8 89 aa1.55□□□□□ -2.16
UFD4YKL010C YBR144CP34215 104 aa1.54□□□□□ -2.16
UFD4YKL010C RPC10P40422 70 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms