RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W AQY2P0CD90 149 aa2.05□□□□□ -2.08
TRA1YHR099W YKL102CP34249 101 aa2.05□□□□□ -2.08
TRA1YHR099W YIR020CP40575 100 aa2.05□□□□□ -2.08
TRA1YHR099W TOS8P53147 276 aa2.05□□□□□ -2.08
TRA1YHR099W BET5Q03630 159 aa2.05□□□□□ -2.08
TRA1YHR099W YLR415CO13578 112 aa2.05□□□□□ -2.08
TRA1YHR099W RPL18AP0CX49 186 aaKnown RBP2.05□□□□□ -2.08
TRA1YHR099W RPL18BP0CX50 186 aaKnown RBP2.05□□□□□ -2.08
TRA1YHR099W DCV1P43595 202 aa2.05□□□□□ -2.08
TRA1YHR099W MRX7P53869 86 aa2.05□□□□□ -2.08
TRA1YHR099W CUE4Q04201 117 aaPredicted RBP2.05□□□□□ -2.08
TRA1YHR099W YOR097CQ12274 175 aaPredicted RBP2.05□□□□□ -2.08
TRA1YHR099W BEM2P39960 2167 aaKnown RBP2.05□□□□□ -2.08
TRA1YHR099W YKL044WP36092 106 aa2.05□□□□□ -2.08
TRA1YHR099W YJL171CP46992 396 aa2.05□□□□□ -2.08
TRA1YHR099W GAT3Q07928 141 aa2.05□□□□□ -2.08
TRA1YHR099W YOR072W-BQ3E832 53 aa2.04□□□□□ -2.08
TRA1YHR099W PCP1P53259 346 aa2.04□□□□□ -2.08
TRA1YHR099W YLR122CQ12312 125 aa2.04□□□□□ -2.08
TRA1YHR099W SEC16P48415 2195 aaKnown RBP2.04□□□□□ -2.08
TRA1YHR099W YER135CP40082 130 aa2.04□□□□□ -2.08
TRA1YHR099W SHH3Q04487 196 aa2.04□□□□□ -2.08
TRA1YHR099W YLR194CQ05777 254 aa2.04□□□□□ -2.08
TRA1YHR099W SLH1P53327 1967 aaKnown RBP2.04□□□□□ -2.08
TRA1YHR099W RPL2AP0CX45 254 aaKnown RBP2.04□□□□□ -2.08
TRA1YHR099W RPL2BP0CX46 254 aaKnown RBP2.04□□□□□ -2.08
TRA1YHR099W VMA11P32842 164 aa2.04□□□□□ -2.08
TRA1YHR099W TOM6P33448 61 aa2.04□□□□□ -2.08
TRA1YHR099W ATS1P31386 333 aa2.04□□□□□ -2.08
TRA1YHR099W UTR5P32630 166 aa2.04□□□□□ -2.08
TRA1YHR099W YNL042W-BQ3E7Z2 85 aa2.04□□□□□ -2.08
TRA1YHR099W CKS1P20486 150 aaKnown RBP2.04□□□□□ -2.08
TRA1YHR099W YCR001WP25347 104 aa2.04□□□□□ -2.08
TRA1YHR099W MRPL38P35996 138 aaPredicted RBP2.04□□□□□ -2.08
TRA1YHR099W SBH1P52870 82 aa2.04□□□□□ -2.08
TRA1YHR099W HSK3P69852 69 aa2.04□□□□□ -2.08
TRA1YHR099W ATG33Q06485 197 aa2.04□□□□□ -2.08
TRA1YHR099W YDL241WQ07738 123 aa2.04□□□□□ -2.08
TRA1YHR099W YDR215CQ12240 137 aa2.04□□□□□ -2.08
TRA1YHR099W MXR2P25566 168 aa2.03□□□□□ -2.08
TRA1YHR099W WSC4P38739 605 aa2.03□□□□□ -2.08
TRA1YHR099W YBR201C-AQ2V2Q3 67 aa2.03□□□□□ -2.08
TRA1YHR099W YLR365WQ7LIF2 110 aa2.03□□□□□ -2.08
TRA1YHR099W ATP20Q12233 115 aa2.03□□□□□ -2.08
TRA1YHR099W FIT3Q08907 204 aa2.03□□□□□ -2.08
TRA1YHR099W YSY6P38374 65 aa2.03□□□□□ -2.08
TRA1YHR099W YLR112WQ12130 139 aa2.03□□□□□ -2.08
TRA1YHR099W YIL156W-BQ2V2P4 73 aa2.03□□□□□ -2.08
TRA1YHR099W MIG1P27705 504 aa2.03□□□□□ -2.08
TRA1YHR099W COX14P39103 70 aa2.03□□□□□ -2.08
TRA1YHR099W SEN15Q04675 128 aa2.03□□□□□ -2.08
TRA1YHR099W MPC3P53311 146 aa2.03□□□□□ -2.09
TRA1YHR099W EDC2P40023 145 aaPredicted RBP2.02□□□□□ -2.09
TRA1YHR099W BRP1P53194 125 aa2.02□□□□□ -2.09
TRA1YHR099W WSC2P53832 503 aa2.02□□□□□ -2.09
TRA1YHR099W MVB12P42939 101 aa2.02□□□□□ -2.09
TRA1YHR099W VEL1P53058 206 aa2.02□□□□□ -2.09
TRA1YHR099W GRE1Q08969 168 aa2.02□□□□□ -2.09
TRA1YHR099W RPL15AP05748 204 aaKnown RBP2.02□□□□□ -2.09
TRA1YHR099W RPL15BP54780 204 aaPredicted RBP2.02□□□□□ -2.09
TRA1YHR099W HST4P53688 370 aa2.02□□□□□ -2.09
TRA1YHR099W YER079WP40052 210 aaKnown RBP2.02□□□□□ -2.09
TRA1YHR099W YER175W-AQ8TGU4 54 aa2.02□□□□□ -2.09
TRA1YHR099W CPR1P14832 162 aaKnown RBP2.02□□□□□ -2.09
TRA1YHR099W YCR043CP25361 127 aa2.02□□□□□ -2.09
TRA1YHR099W HOR7Q05827 59 aa2.02□□□□□ -2.09
TRA1YHR099W YIL102C-AQ2V2P5 75 aa2.02□□□□□ -2.09
TRA1YHR099W ICS3P47034 131 aa2.02□□□□□ -2.09
TRA1YHR099W YGR025WP53216 100 aa2.02□□□□□ -2.09
TRA1YHR099W ECM19Q06011 112 aa2.02□□□□□ -2.09
TRA1YHR099W FPR1P20081 114 aaKnown RBP2.01□□□□□ -2.09
TRA1YHR099W PET8P38921 284 aa2.01□□□□□ -2.09
TRA1YHR099W CCW12Q12127 133 aa2.01□□□□□ -2.09
TRA1YHR099W RSM19P53733 91 aaPredicted RBP2.01□□□□□ -2.09
TRA1YHR099W SLM6P38343 150 aa2.01□□□□□ -2.09
TRA1YHR099W YMR252CQ04814 134 aa2.01□□□□□ -2.09
TRA1YHR099W NCE102Q12207 173 aaRIP-Chip data2.01□□□□□ -2.09not detected
TRA1YHR099W YBR090CP38253 122 aa2.01□□□□□ -2.09
TRA1YHR099W PTH1P38876 190 aaKnown RBP2.01□□□□□ -2.09
TRA1YHR099W YOR385WQ08909 290 aa2.01□□□□□ -2.09
TRA1YHR099W YDL157CQ12082 118 aa2.01□□□□□ -2.09
TRA1YHR099W YKL018C-AQ3E7A7 99 aa2.01□□□□□ -2.09
TRA1YHR099W YGR219WP53307 113 aa2.01□□□□□ -2.09
TRA1YHR099W YBL112CQ3E7Y4 105 aa2.01□□□□□ -2.09
TRA1YHR099W YGL015CP33199 130 aa2.01□□□□□ -2.09
TRA1YHR099W YLR296WQ05898 108 aa2.01□□□□□ -2.09
TRA1YHR099W CTR2P38865 189 aa2□□□□□ -2.09
TRA1YHR099W FZF1P32805 299 aa2□□□□□ -2.09
TRA1YHR099W MPC2P38857 129 aa2□□□□□ -2.09
TRA1YHR099W YMR103CQ04436 120 aa2□□□□□ -2.09
TRA1YHR099W YBR230W-AQ3E762 66 aa2□□□□□ -2.09
TRA1YHR099W RPS26AP39938 119 aaKnown RBP2□□□□□ -2.09
TRA1YHR099W RPS26BP39939 119 aaKnown RBP2□□□□□ -2.09
TRA1YHR099W YBR219CP38317 127 aa2□□□□□ -2.09
TRA1YHR099W YOL160WQ08321 113 aa2□□□□□ -2.09
TRA1YHR099W DFM1Q12743 341 aaKnown RBP2□□□□□ -2.09
TRA1YHR099W YGR240C-AQ3E786 66 aa2□□□□□ -2.09
TRA1YHR099W SPI1P40092 148 aa2□□□□□ -2.09
TRA1YHR099W YDR114CQ04597 100 aa2□□□□□ -2.09
TRA1YHR099W RTC6O14464 93 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 88.4 ms