RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W COA3Q3E7B2 85 aa3.37□□□□□ -1.87
PMC1YGL006W RPS23AP0CX29 145 aaKnown RBP3.37□□□□□ -1.87
PMC1YGL006W RPS23BP0CX30 145 aa3.37□□□□□ -1.87
PMC1YGL006W KEG1P43614 200 aa3.37□□□□□ -1.87
PMC1YGL006W PFY1P07274 126 aa3.36□□□□□ -1.87
PMC1YGL006W YGR045CP53229 120 aa3.36□□□□□ -1.87
PMC1YGL006W TRP1P00912 224 aa3.36□□□□□ -1.87
PMC1YGL006W YLR342W-AQ3E810 57 aa3.36□□□□□ -1.87
PMC1YGL006W YHR139C-AO13536 103 aa3.36□□□□□ -1.87
PMC1YGL006W RPB10P22139 70 aa3.36□□□□□ -1.87
PMC1YGL006W AIM19P40502 157 aa3.36□□□□□ -1.87
PMC1YGL006W URM1P40554 99 aaPredicted RBP3.36□□□□□ -1.87
PMC1YGL006W YCH1P42937 148 aa3.36□□□□□ -1.87
PMC1YGL006W SKI6P46948 246 aaPredicted RBP3.36□□□□□ -1.87
PMC1YGL006W LCB3P47013 409 aa3.36□□□□□ -1.87
PMC1YGL006W PBP4Q07362 185 aaKnown RBP3.36□□□□□ -1.87
PMC1YGL006W RAD6P06104 172 aa3.35□□□□□ -1.87
PMC1YGL006W COX10P21592 462 aa3.35□□□□□ -1.87
PMC1YGL006W MRPL49P40858 161 aaPredicted RBP3.35□□□□□ -1.87
PMC1YGL006W CAX4P53223 239 aa3.35□□□□□ -1.87
PMC1YGL006W ENV10Q99382 181 aa3.35□□□□□ -1.87
PMC1YGL006W MIC12P38341 106 aa3.35□□□□□ -1.87
PMC1YGL006W NRM1P53718 249 aa3.35□□□□□ -1.87
PMC1YGL006W YCL048W-AQ2V2Q2 79 aa3.35□□□□□ -1.87
PMC1YGL006W YOR011W-AQ3E807 68 aa3.35□□□□□ -1.87
PMC1YGL006W YRA2P36036 203 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
PMC1YGL006W GLE2P40066 365 aa3.35□□□□□ -1.87
PMC1YGL006W MGR2Q02889 113 aa3.35□□□□□ -1.87
PMC1YGL006W ERF2Q06551 359 aa3.35□□□□□ -1.87
PMC1YGL006W CSF1Q12150 2958 aa3.34□□□□□ -1.87
PMC1YGL006W GCN1P33892 2672 aaKnown RBP3.34□□□□□ -1.87
PMC1YGL006W RPS8AP0CX39 200 aaKnown RBP3.34□□□□□ -1.87
PMC1YGL006W RPS8BP0CX40 200 aaKnown RBP3.34□□□□□ -1.87
PMC1YGL006W IMP2P46972 177 aa3.34□□□□□ -1.87
PMC1YGL006W YOR034C-AQ3E735 80 aa3.34□□□□□ -1.87
PMC1YGL006W YFL041W-AQ3E817 63 aa3.34□□□□□ -1.87
PMC1YGL006W YCL021W-AQ96VH3 125 aa3.34□□□□□ -1.87
PMC1YGL006W DCV1P43595 202 aa3.34□□□□□ -1.87
PMC1YGL006W GAT3Q07928 141 aa3.34□□□□□ -1.87
PMC1YGL006W YIR021W-AQ3E739 70 aa3.34□□□□□ -1.87
PMC1YGL006W YPR053CQ6Q5F3 151 aa3.34□□□□□ -1.87
PMC1YGL006W VMA11P32842 164 aa3.33□□□□□ -1.88
PMC1YGL006W WWM1P43582 211 aaKnown RBP3.33□□□□□ -1.88
PMC1YGL006W SED1Q01589 338 aa3.33□□□□□ -1.88
PMC1YGL006W YCR085WP25650 117 aa3.33□□□□□ -1.88
PMC1YGL006W HUR1P45820 110 aa3.33□□□□□ -1.88
PMC1YGL006W TOS6P48560 102 aa3.33□□□□□ -1.88
PMC1YGL006W ECM12O13529 151 aa3.32□□□□□ -1.88
PMC1YGL006W Q0255P03881 472 aa3.32□□□□□ -1.88
PMC1YGL006W RPL42AP0CX27 106 aaKnown RBP3.32□□□□□ -1.88
PMC1YGL006W RPL42BP0CX28 106 aaKnown RBP3.32□□□□□ -1.88
PMC1YGL006W UTP20P35194 2493 aaKnown RBP3.32□□□□□ -1.88
PMC1YGL006W RPL16AP26784 199 aaKnown RBP3.32□□□□□ -1.88
PMC1YGL006W POR2P40478 281 aa3.32□□□□□ -1.88
PMC1YGL006W SGN1P40561 250 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
PMC1YGL006W YJL027CP47063 138 aaPredicted RBP3.32□□□□□ -1.88
PMC1YGL006W DAP1Q12091 152 aa3.32□□□□□ -1.88
PMC1YGL006W EMC6Q12431 108 aa3.32□□□□□ -1.88
PMC1YGL006W YIP3P53633 176 aa3.31□□□□□ -1.88
PMC1YGL006W YNL194CP40169 301 aa3.31□□□□□ -1.88
PMC1YGL006W MRPL24P36525 258 aaPredicted RBP3.31□□□□□ -1.88
PMC1YGL006W YDR119W-AQ2V2P9 66 aa3.31□□□□□ -1.88
PMC1YGL006W YLR281CQ05863 155 aa3.3□□□□□ -1.88
PMC1YGL006W LDB16P25587 256 aa3.3□□□□□ -1.88
PMC1YGL006W SMP1P38128 452 aa3.3□□□□□ -1.88
PMC1YGL006W YHL042WP38729 150 aa3.3□□□□□ -1.88
PMC1YGL006W KRE9P39005 276 aa3.3□□□□□ -1.88
PMC1YGL006W KRE1P17260 313 aa3.29□□□□□ -1.88
PMC1YGL006W YHL018WP38744 120 aaPredicted RBP3.29□□□□□ -1.88
PMC1YGL006W SPI1P40092 148 aa3.29□□□□□ -1.88
PMC1YGL006W RPL38P49167 78 aaKnown RBP3.29□□□□□ -1.88
PMC1YGL006W YLR285C-AQ3E771 56 aa3.29□□□□□ -1.88
PMC1YGL006W RPL16BP26785 198 aaKnown RBP3.29□□□□□ -1.88
PMC1YGL006W YGR219WP53307 113 aa3.29□□□□□ -1.88
PMC1YGL006W IES6P32617 166 aa3.28□□□□□ -1.88
PMC1YGL006W PEX17P40155 199 aa3.28□□□□□ -1.88
PMC1YGL006W YDL186WP48568 277 aa3.28□□□□□ -1.88
PMC1YGL006W YBR200W-AQ3E755 54 aa3.28□□□□□ -1.88
PMC1YGL006W YER039C-AP0CD97 72 aa3.28□□□□□ -1.88
PMC1YGL006W SHU1P38751 150 aa3.28□□□□□ -1.88
PMC1YGL006W YER135CP40082 130 aa3.28□□□□□ -1.88
PMC1YGL006W SUT1P53032 299 aaKnown RBP3.28□□□□□ -1.88
PMC1YGL006W YNL046WP53956 172 aa3.28□□□□□ -1.88
PMC1YGL006W RPL11AP0C0W9 174 aaKnown RBP3.27□□□□□ -1.89
PMC1YGL006W RRT13P40042 185 aa3.27□□□□□ -1.89
PMC1YGL006W YJR146WP47174 117 aa3.27□□□□□ -1.89
PMC1YGL006W RPL2AP0CX45 254 aaKnown RBP3.27□□□□□ -1.89
PMC1YGL006W RPL2BP0CX46 254 aaKnown RBP3.27□□□□□ -1.89
PMC1YGL006W SIM1P40472 476 aa3.27□□□□□ -1.89
PMC1YGL006W YHR022CP38763 256 aa3.27□□□□□ -1.89
PMC1YGL006W TOS8P53147 276 aa3.27□□□□□ -1.89
PMC1YGL006W YEL008WP40001 126 aa3.26□□□□□ -1.89
PMC1YGL006W SBH2P52871 88 aa3.26□□□□□ -1.89
PMC1YGL006W YGL260WP53056 76 aa3.26□□□□□ -1.89
PMC1YGL006W RPL11BQ3E757 174 aaPredicted RBP3.26□□□□□ -1.89
PMC1YGL006W YCR050CP25630 102 aa3.26□□□□□ -1.89
PMC1YGL006W MEC1P38111 2368 aa3.26□□□□□ -1.89
PMC1YGL006W YSY6P38374 65 aa3.26□□□□□ -1.89
PMC1YGL006W YDR034W-BQ6Q5X2 51 aa3.26□□□□□ -1.89
PMC1YGL006W SPS100P13130 326 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms