RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	SIM1	P40472	476 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	YFR057W	P43625	151 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	HOR7	Q05827	59 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	SRL1	Q08673	210 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	YBR200W-A	Q3E755	54 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	COA3	Q3E7B2	85 aa		3.61	□□□□□ -1.83
RVB1	YDR190C	PRP8	P33334	2413 aa	Known RBP	3.6	□□□□□ -1.83
RVB1	YDR190C	KEG1	P43614	200 aa		3.6	□□□□□ -1.83
RVB1	YDR190C	ELC1	Q03071	99 aa		3.6	□□□□□ -1.83
RVB1	YDR190C	YML079W	Q03629	201 aa		3.6	□□□□□ -1.83
RVB1	YDR190C	SPG4	Q04438	115 aa		3.6	□□□□□ -1.83
RVB1	YDR190C	CCW12	Q12127	133 aa		3.6	□□□□□ -1.83
RVB1	YDR190C	Q0255	P03881	472 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	RPS28B	P0C0X0	67 aa	Known RBP	3.59	□□□□□ -1.83
RVB1	YDR190C	MIG3	P39943	394 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	DCV1	P43595	202 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	TOS6	P48560	102 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	YNR077C	P53758	84 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	AIM34	Q03673	198 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	MSA1	Q08471	629 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	YOR008C-A	Q3E7B9	74 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.59	□□□□□ -1.83
RVB1	YDR190C	YNL146C-A	Q3E7Z1	64 aa		3.59	□□□□□ -1.83
RVB1	YDR190C	PAI3	P01094	68 aa		3.58	□□□□□ -1.84
RVB1	YDR190C	VAR1	P02381	398 aa		3.58	□□□□□ -1.84
RVB1	YDR190C	RPL42A	P0CX27	106 aa	Known RBP	3.58	□□□□□ -1.84
RVB1	YDR190C	RPL42B	P0CX28	106 aa	Known RBP	3.58	□□□□□ -1.84
RVB1	YDR190C	YCR041W	P37265	110 aa		3.58	□□□□□ -1.84
RVB1	YDR190C	YIL102C-A	Q2V2P5	75 aa		3.58	□□□□□ -1.84
RVB1	YDR190C	RPL28	P02406	149 aa	Known RBP	3.57	□□□□□ -1.84
RVB1	YDR190C	ATP15	P21306	62 aa		3.57	□□□□□ -1.84
RVB1	YDR190C	RPL16B	P26785	198 aa	Known RBP	3.57	□□□□□ -1.84
RVB1	YDR190C	ECM33	P38248	429 aa	Known RBP	3.57	□□□□□ -1.84
RVB1	YDR190C	VTC1	P40046	129 aa	RIP-Chip data	3.57	□□□□□ -1.84	not detected
RVB1	YDR190C	YFR035C	P43608	114 aa		3.57	□□□□□ -1.84
RVB1	YDR190C	AIM11	P87275	137 aa		3.57	□□□□□ -1.84
RVB1	YDR190C	RUB1	Q03919	77 aa		3.57	□□□□□ -1.84
RVB1	YDR190C	YMR244W	Q04018	355 aa		3.57	□□□□□ -1.84
RVB1	YDR190C	HYP2	P23301	157 aa	Known RBP	3.56	□□□□□ -1.84
RVB1	YDR190C	MID2	P36027	376 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	YKR041W	P36134	250 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	OXA1	P39952	402 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	FIP1	P45976	327 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	ABF2	Q02486	183 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	YLR042C	Q07990	161 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	TAR1	Q8TGM6	124 aa		3.56	□□□□□ -1.84
RVB1	YDR190C	RPL43A	P0CX25	92 aa	Known RBP	3.55	□□□□□ -1.84
RVB1	YDR190C	RPL43B	P0CX26	92 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	ANB1	P19211	157 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	RPB9	P27999	122 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	YBR209W	P38311	105 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	RRT13	P40042	185 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	YJR146W	P47174	117 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	YGL088W	P53151	121 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	SCW10	Q04951	389 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	YLR296W	Q05898	108 aa		3.55	□□□□□ -1.84
RVB1	YDR190C	ADH1	P00330	348 aa	Known RBP	3.54	□□□□□ -1.84
RVB1	YDR190C	RPS8A	P0CX39	200 aa	Known RBP	3.54	□□□□□ -1.84
RVB1	YDR190C	RPS8B	P0CX40	200 aa	Known RBP	3.54	□□□□□ -1.84
RVB1	YDR190C	RPL16A	P26784	199 aa	Known RBP	3.54	□□□□□ -1.84
RVB1	YDR190C	YER181C	P40097	107 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	YIA6	P40556	373 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	MMS2	P53152	137 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	YPL080C	Q02826	108 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	MRPS8	Q03799	155 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	PRM3	Q08931	133 aa		3.54	□□□□□ -1.84
RVB1	YDR190C	YLR194C	Q05777	254 aa		3.53	□□□□□ -1.84
RVB1	YDR190C	YOR097C	Q12274	175 aa	Predicted RBP	3.53	□□□□□ -1.84
RVB1	YDR190C	IGO2	Q9P305	131 aa		3.53	□□□□□ -1.84
RVB1	YDR190C	MEC1	P38111	2368 aa		3.53	□□□□□ -1.84
RVB1	YDR190C	YHR212W-A	P0CX91	67 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	CPR1	P14832	162 aa	Known RBP	3.52	□□□□□ -1.85
RVB1	YDR190C	YPT53	P36019	220 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	MRPS12	P53732	153 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	YNL190W	P53872	204 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	YLR281C	Q05863	155 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	YPL257W	Q08974	193 aa		3.52	□□□□□ -1.85
RVB1	YDR190C	ARO2	P28777	376 aa	Known RBP	3.51	□□□□□ -1.85
RVB1	YDR190C	YKL023C-A	Q2V2P3	75 aa		3.51	□□□□□ -1.85
RVB1	YDR190C	UGX2	P32772	223 aa		3.51	□□□□□ -1.85
RVB1	YDR190C	ALG13	P53178	202 aa		3.51	□□□□□ -1.85
RVB1	YDR190C	SLO1	Q3E784	85 aa		3.51	□□□□□ -1.85
RVB1	YDR190C	TRP1	P00912	224 aa		3.5	□□□□□ -1.85
RVB1	YDR190C	RPL15A	P05748	204 aa	Known RBP	3.5	□□□□□ -1.85
RVB1	YDR190C	YEL008W	P40001	126 aa		3.5	□□□□□ -1.85
RVB1	YDR190C	YNL217W	P40152	326 aa		3.5	□□□□□ -1.85
RVB1	YDR190C	YIL059C	P40520	121 aa		3.5	□□□□□ -1.85
RVB1	YDR190C	LSM6	Q06406	86 aa	Known RBP	3.5	□□□□□ -1.85
RVB1	YDR190C	YLR361C-A	Q3E795	98 aa		3.5	□□□□□ -1.85
RVB1	YDR190C	RPS11A	P0CX47	156 aa	Known RBP	3.49	□□□□□ -1.85
RVB1	YDR190C	RPS11B	P0CX48	156 aa	Known RBP	3.49	□□□□□ -1.85
RVB1	YDR190C	NHP2	P32495	156 aa	Predicted RBP	3.49	□□□□□ -1.85
RVB1	YDR190C	SHU1	P38751	150 aa		3.49	□□□□□ -1.85
RVB1	YDR190C	YCL021W-A	Q96VH3	125 aa		3.49	□□□□□ -1.85
RVB1	YDR190C	CCW14	O13547	238 aa		3.48	□□□□□ -1.85
RVB1	YDR190C	PEX17	P40155	199 aa		3.48	□□□□□ -1.85
RVB1	YDR190C	PMP3	P87284	55 aa		3.48	□□□□□ -1.85
RVB1	YDR190C	RPL2A	P0CX45	254 aa	Known RBP	3.47	□□□□□ -1.85
RVB1	YDR190C	RPL2B	P0CX46	254 aa	Known RBP	3.47	□□□□□ -1.85
RVB1	YDR190C	YCR043C	P25361	127 aa		3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms