RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W YHL005CP38752 130 aa2.82□□□□□ -1.96
SNF11YDR073W VPS55P47111 140 aa2.82□□□□□ -1.96
SNF11YDR073W ROM2P51862 1356 aaKnown RBP2.82□□□□□ -1.96
SNF11YDR073W YMR007WQ03675 126 aa2.81□□□□□ -1.96
SNF11YDR073W YGR240C-AQ3E786 66 aa2.81□□□□□ -1.96
SNF11YDR073W YDR029WQ12111 104 aa2.8□□□□□ -1.96
SNF11YDR073W MRPL31P14063 131 aaPredicted RBP2.79□□□□□ -1.96
SNF11YDR073W SLH1P53327 1967 aaKnown RBP2.78□□□□□ -1.96
SNF11YDR073W ESC1Q03661 1658 aaKnown RBP2.77□□□□□ -1.97
SNF11YDR073W HMRA1P0CY11 126 aa2.77□□□□□ -1.97
SNF11YDR073W SNU13P39990 126 aaKnown RBP2.77□□□□□ -1.97
SNF11YDR073W YOL118CQ08259 102 aa2.77□□□□□ -1.97
SNF11YDR073W YGL194C-AQ2V2P6 80 aa2.76□□□□□ -1.97
SNF11YDR073W RRT15Q3E811 62 aa2.76□□□□□ -1.97
SNF11YDR073W CCW14O13547 238 aa2.75□□□□□ -1.97
SNF11YDR073W PAU5P43575 122 aa2.75□□□□□ -1.97
SNF11YDR073W LTE1P07866 1435 aa2.75□□□□□ -1.97
SNF11YDR073W ROX3P25046 220 aa2.74□□□□□ -1.97
SNF11YDR073W HUA1P40325 198 aa2.74□□□□□ -1.97
SNF11YDR073W MRPS12P53732 153 aa2.74□□□□□ -1.97
SNF11YDR073W NHP10Q03435 203 aa2.74□□□□□ -1.97
SNF11YDR073W YMR082CQ04276 118 aa2.73□□□□□ -1.97
SNF11YDR073W SUS1Q6WNK7 96 aa2.73□□□□□ -1.97
SNF11YDR073W MYO1P08964 1928 aa2.73□□□□□ -1.97
SNF11YDR073W LCL2Q08045 131 aa2.72□□□□□ -1.97
SNF11YDR073W SCP1Q08873 200 aa2.72□□□□□ -1.97
SNF11YDR073W YCR095W-AQ3E787 52 aa2.72□□□□□ -1.97
SNF11YDR073W GCV3P39726 170 aaPredicted RBP2.71□□□□□ -1.98
SNF11YDR073W MVB12P42939 101 aa2.71□□□□□ -1.98
SNF11YDR073W IMP2P46972 177 aa2.71□□□□□ -1.98
SNF11YDR073W HUG1Q6Q5K6 68 aa2.71□□□□□ -1.98
SNF11YDR073W BEM2P39960 2167 aaKnown RBP2.71□□□□□ -1.98
SNF11YDR073W SWR1Q05471 1514 aa2.7□□□□□ -1.98
SNF11YDR073W ECM12O13529 151 aa2.7□□□□□ -1.98
SNF11YDR073W YDR042CQ03205 200 aa2.7□□□□□ -1.98
SNF11YDR073W RSM18P40033 138 aa2.68□□□□□ -1.98
SNF11YDR073W YDR210WQ03482 75 aa2.67□□□□□ -1.98
SNF11YDR073W URB1P34241 1764 aaKnown RBP2.66□□□□□ -1.98
SNF11YDR073W SNA2P56508 79 aa2.66□□□□□ -1.98
SNF11YDR073W NTE1Q04958 1679 aa2.66□□□□□ -1.98
SNF11YDR073W HFA1P32874 2273 aa2.66□□□□□ -1.98
SNF11YDR073W YHR213W-BQ8TGK1 99 aa2.65□□□□□ -1.99
SNF11YDR073W YPL038W-AQ3E7B4 63 aa2.64□□□□□ -1.99
SNF11YDR073W SRB8P25648 1427 aa2.64□□□□□ -1.99
SNF11YDR073W YSP2Q06681 1438 aa2.64□□□□□ -1.99
SNF11YDR073W GDB1Q06625 1536 aa2.63□□□□□ -1.99
SNF11YDR073W HHY1P39982 102 aa2.63□□□□□ -1.99
SNF11YDR073W COX12Q01519 83 aa2.63□□□□□ -1.99
SNF11YDR073W LCL1Q02786 101 aa2.63□□□□□ -1.99
SNF11YDR073W ICY1Q04329 127 aa2.61□□□□□ -1.99
SNF11YDR073W MRP17P28778 131 aa2.59□□□□□ -1.99
SNF11YDR073W MRPL38P35996 138 aaPredicted RBP2.59□□□□□ -1.99
SNF11YDR073W PAU6P0CE90 120 aa2.58□□□□□ -2
SNF11YDR073W PAU18P0CE91 120 aa2.58□□□□□ -2
SNF11YDR073W YBL071CP38185 102 aa2.58□□□□□ -2
SNF11YDR073W YMR141CP40211 102 aa2.58□□□□□ -2
SNF11YDR073W YJR128WP47162 119 aa2.58□□□□□ -2
SNF11YDR073W SEC7P11075 2009 aaKnown RBP2.57□□□□□ -2
SNF11YDR073W YLR255CO13574 117 aa2.56□□□□□ -2
SNF11YDR073W MHF2Q3E829 80 aa2.56□□□□□ -2
SNF11YDR073W POL1P13382 1468 aa2.56□□□□□ -2
SNF11YDR073W YIL086CP40503 102 aa2.55□□□□□ -2
SNF11YDR073W SPC1P46965 94 aa2.55□□□□□ -2
SNF11YDR073W YMR175W-AQ3E766 64 aa2.55□□□□□ -2
SNF11YDR073W AIM19P40502 157 aa2.54□□□□□ -2
SNF11YDR073W RPL37AP49166 88 aaKnown RBP2.54□□□□□ -2
SNF11YDR073W MRX7P53869 86 aa2.54□□□□□ -2
SNF11YDR073W COX19Q3E731 98 aa2.54□□□□□ -2
SNF11YDR073W YKL068W-AQ3E826 78 aa2.53□□□□□ -2
SNF11YDR073W YRF1-1P0CX20 1796 aa2.53□□□□□ -2
SNF11YDR073W YRF1-5P0CX21 1796 aa2.53□□□□□ -2
SNF11YDR073W YRF1-8P0CX22 1796 aa2.53□□□□□ -2
SNF11YDR073W YNR034W-AQ3E841 98 aa2.52□□□□□ -2.01
SNF11YDR073W SHU1P38751 150 aa2.51□□□□□ -2.01
SNF11YDR073W LAA1P39526 2014 aa2.51□□□□□ -2.01
SNF11YDR073W MPC2P38857 129 aa2.49□□□□□ -2.01
SNF11YDR073W ESP1Q03018 1630 aa2.49□□□□□ -2.01
SNF11YDR073W PAU1P0CE88 120 aa2.48□□□□□ -2.01
SNF11YDR073W PAU14P0CE89 120 aa2.48□□□□□ -2.01
SNF11YDR073W PAU8P0CE92 120 aa2.48□□□□□ -2.01
SNF11YDR073W PAU11P0CE93 120 aa2.48□□□□□ -2.01
SNF11YDR073W NHP2P32495 156 aaPredicted RBP2.48□□□□□ -2.01
SNF11YDR073W PAU13P38725 120 aa2.48□□□□□ -2.01
SNF11YDR073W PAU10Q03050 120 aa2.48□□□□□ -2.01
SNF11YDR073W YOR034C-AQ3E735 80 aa2.48□□□□□ -2.01
SNF11YDR073W PAU9Q3E770 120 aa2.48□□□□□ -2.01
SNF11YDR073W SEC16P48415 2195 aaKnown RBP2.48□□□□□ -2.01
SNF11YDR073W RPS11AP0CX47 156 aaKnown RBP2.47□□□□□ -2.01
SNF11YDR073W RPS11BP0CX48 156 aaKnown RBP2.47□□□□□ -2.01
SNF11YDR073W YBR292CP38357 123 aa2.47□□□□□ -2.01
SNF11YDR073W PAU20Q08322 120 aa2.47□□□□□ -2.01
SNF11YDR073W BRR2P32639 2163 aaKnown RBP2.46□□□□□ -2.02
SNF11YDR073W RPA12P32529 125 aaKnown RBP2.46□□□□□ -2.02
SNF11YDR073W CWP2P43497 92 aa2.46□□□□□ -2.02
SNF11YDR073W PAU4P53427 120 aa2.45□□□□□ -2.02
SNF11YDR073W YCR085WP25650 117 aa2.44□□□□□ -2.02
SNF11YDR073W TY4B-HP0C2J7 1802 aa2.42□□□□□ -2.02
SNF11YDR073W BSC4P53841 131 aa2.42□□□□□ -2.02
SNF11YDR073W POC4Q12245 148 aaPredicted RBP2.42□□□□□ -2.02
SNF11YDR073W TY1B-PR2P0C2J0 1756 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms