RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ATP20Q12233 115 aa0.77□□□□□ -2.29
VPS54YDR027C YOS1Q3E834 85 aa0.77□□□□□ -2.29
VPS54YDR027C VAR1P02381 398 aa0.76□□□□□ -2.29
VPS54YDR027C AHT1P29589 182 aa0.76□□□□□ -2.29
VPS54YDR027C SFK1P35735 353 aa0.76□□□□□ -2.29
VPS54YDR027C HTD2P38790 280 aaKnown RBP0.76□□□□□ -2.29
VPS54YDR027C FIT2Q08906 153 aa0.76□□□□□ -2.29
VPS54YDR027C COA3Q3E7B2 85 aa0.76□□□□□ -2.29
VPS54YDR027C SUS1Q6WNK7 96 aa0.76□□□□□ -2.29
VPS54YDR027C INO4P13902 151 aa0.76□□□□□ -2.29
VPS54YDR027C UBC8P28263 218 aa0.76□□□□□ -2.29
VPS54YDR027C RPL14AP36105 138 aaKnown RBP0.76□□□□□ -2.29
VPS54YDR027C TRS20P38334 175 aa0.76□□□□□ -2.29
VPS54YDR027C MSL1P40567 111 aaPredicted RBP0.76□□□□□ -2.29
VPS54YDR027C VMA21P41806 77 aa0.76□□□□□ -2.29
VPS54YDR027C BAT2P47176 376 aaKnown RBP0.76□□□□□ -2.29
VPS54YDR027C YPL067CQ02754 198 aa0.76□□□□□ -2.29
VPS54YDR027C COX8P04039 78 aa0.75□□□□□ -2.29
VPS54YDR027C TMA19P35691 167 aaKnown RBP0.75□□□□□ -2.29
VPS54YDR027C RRT1P38192 103 aa0.75□□□□□ -2.29
VPS54YDR027C NSA2P40078 261 aaKnown RBP0.75□□□□□ -2.29
VPS54YDR027C SFT1P43682 97 aa0.75□□□□□ -2.29
VPS54YDR027C TIM8P57744 87 aa0.75□□□□□ -2.29
VPS54YDR027C COX12Q01519 83 aa0.75□□□□□ -2.29
VPS54YDR027C YMR082CQ04276 118 aa0.75□□□□□ -2.29
VPS54YDR027C YOR385WQ08909 290 aa0.75□□□□□ -2.29
VPS54YDR027C YPR013CQ12145 317 aa0.75□□□□□ -2.29
VPS54YDR027C YHR140WP38842 239 aa0.75□□□□□ -2.29
VPS54YDR027C RPB11P38902 120 aa0.75□□□□□ -2.29
VPS54YDR027C SNU13P39990 126 aaKnown RBP0.75□□□□□ -2.29
VPS54YDR027C HYR1P40581 163 aaKnown RBP0.75□□□□□ -2.29
VPS54YDR027C PHS1P40857 217 aa0.75□□□□□ -2.29
VPS54YDR027C HUR1P45820 110 aa0.75□□□□□ -2.29
VPS54YDR027C SNN1P48232 102 aa0.75□□□□□ -2.29
VPS54YDR027C EST3Q03096 181 aa0.75□□□□□ -2.29
VPS54YDR027C PAU23Q07987 124 aa0.75□□□□□ -2.29
VPS54YDR027C YOR015WQ12169 119 aa0.75□□□□□ -2.29
VPS54YDR027C PAU17Q12370 124 aa0.75□□□□□ -2.29
VPS54YDR027C UBC4P15731 148 aa0.74□□□□□ -2.29
VPS54YDR027C TOM6P33448 61 aa0.74□□□□□ -2.29
VPS54YDR027C YKR070WP36151 352 aaKnown RBP0.74□□□□□ -2.29
VPS54YDR027C HSP10P38910 106 aa0.74□□□□□ -2.29
VPS54YDR027C THG1P53215 237 aaKnown RBP0.74□□□□□ -2.29
VPS54YDR027C MET31Q03081 177 aa0.74□□□□□ -2.29
VPS54YDR027C GPI19Q04082 140 aa0.74□□□□□ -2.29
VPS54YDR027C YCR075W-AQ3E830 75 aa0.74□□□□□ -2.29
VPS54YDR027C QCR8P08525 94 aa0.74□□□□□ -2.29
VPS54YDR027C YGL010WP25338 174 aa0.74□□□□□ -2.29
VPS54YDR027C YFR035CP43608 114 aa0.74□□□□□ -2.29
VPS54YDR027C DAD4P69851 72 aa0.74□□□□□ -2.29
VPS54YDR027C LIP1Q03579 150 aa0.74□□□□□ -2.29
VPS54YDR027C YMR103CQ04436 120 aa0.74□□□□□ -2.29
VPS54YDR027C YOR381W-AQ3E804 55 aa0.74□□□□□ -2.29
VPS54YDR027C ECM12O13529 151 aa0.73□□□□□ -2.29
VPS54YDR027C YOL162WP0CF19 215 aa0.73□□□□□ -2.29
VPS54YDR027C HSP12P22943 109 aaKnown RBP0.73□□□□□ -2.29
VPS54YDR027C NHP2P32495 156 aaPredicted RBP0.73□□□□□ -2.29
VPS54YDR027C YHR130CP38834 111 aa0.73□□□□□ -2.29
VPS54YDR027C FLX1P40464 311 aa0.73□□□□□ -2.29
VPS54YDR027C FIT3Q08907 204 aa0.73□□□□□ -2.29
VPS54YDR027C YDR029WQ12111 104 aa0.73□□□□□ -2.29
VPS54YDR027C PAI3P01094 68 aa0.73□□□□□ -2.29
VPS54YDR027C YHR214C-DP0CX93 97 aa0.73□□□□□ -2.29
VPS54YDR027C MRS4P23500 304 aa0.73□□□□□ -2.29
VPS54YDR027C RPB7P34087 171 aa0.73□□□□□ -2.29
VPS54YDR027C EMC5P40540 141 aa0.73□□□□□ -2.29
VPS54YDR027C PAM16P42949 149 aa0.73□□□□□ -2.29
VPS54YDR027C YIL014C-AQ02598 104 aa0.73□□□□□ -2.29
VPS54YDR027C YMR252CQ04814 134 aa0.73□□□□□ -2.29
VPS54YDR027C YKL023C-AQ2V2P3 75 aa0.73□□□□□ -2.29
VPS54YDR027C YHR138CP38841 114 aaPredicted RBP0.72□□□□□ -2.29
VPS54YDR027C GCV3P39726 170 aaPredicted RBP0.72□□□□□ -2.29
VPS54YDR027C YEL028WP39989 153 aa0.72□□□□□ -2.29
VPS54YDR027C YER181CP40097 107 aa0.72□□□□□ -2.29
VPS54YDR027C CCS1P40202 249 aaKnown RBP0.72□□□□□ -2.29
VPS54YDR027C AIM19P40502 157 aa0.72□□□□□ -2.29
VPS54YDR027C YNR064CP53750 290 aa0.72□□□□□ -2.29
VPS54YDR027C SED1Q01589 338 aa0.72□□□□□ -2.29
VPS54YDR027C YML079WQ03629 201 aa0.72□□□□□ -2.29
VPS54YDR027C YMR320WQ04897 101 aa0.72□□□□□ -2.29
VPS54YDR027C SYM1Q06563 197 aa0.72□□□□□ -2.29
VPS54YDR027C GPI11Q06636 219 aa0.72□□□□□ -2.29
VPS54YDR027C YHR007C-AQ07074 71 aa0.72□□□□□ -2.29
VPS54YDR027C YOL118CQ08259 102 aa0.72□□□□□ -2.29
VPS54YDR027C YKL065W-AQ2V2P2 73 aa0.72□□□□□ -2.29
VPS54YDR027C YCL048W-AQ2V2Q2 79 aa0.72□□□□□ -2.29
VPS54YDR027C YSF3P0C074 85 aaPredicted RBP0.72□□□□□ -2.29
VPS54YDR027C RPS25BP0C0T4 108 aaKnown RBP0.72□□□□□ -2.29
VPS54YDR027C YCR085WP25650 117 aa0.72□□□□□ -2.29
VPS54YDR027C PDX3P38075 228 aaKnown RBP0.72□□□□□ -2.29
VPS54YDR027C ELP6Q04868 273 aa0.72□□□□□ -2.29
VPS54YDR027C PRM3Q08931 133 aa0.72□□□□□ -2.29
VPS54YDR027C ATG41Q12048 136 aa0.72□□□□□ -2.29
VPS54YDR027C YDL157CQ12082 118 aa0.72□□□□□ -2.29
VPS54YDR027C YOR343CQ12484 108 aa0.72□□□□□ -2.29
VPS54YDR027C YMR175W-AQ3E766 64 aa0.72□□□□□ -2.29
VPS54YDR027C VMA9Q3E7B6 73 aa0.72□□□□□ -2.29
VPS54YDR027C YNL146C-AQ3E7Z1 64 aa0.72□□□□□ -2.29
VPS54YDR027C SCS22Q6Q595 175 aa0.72□□□□□ -2.29
VPS54YDR027C KSH1Q8TGJ3 72 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms