RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C EFM5P53200 248 aaKnown RBP0.84□□□□□ -2.28
RRI1YDL216C HUT1Q12520 339 aa0.84□□□□□ -2.28
RRI1YDL216C PKR1Q03880 122 aaKnown RBP0.83□□□□□ -2.28
RRI1YDL216C GTT2Q12390 233 aa0.83□□□□□ -2.28
RRI1YDL216C COX5BP00425 151 aa0.82□□□□□ -2.28
RRI1YDL216C SIP18P50263 79 aa0.82□□□□□ -2.28
RRI1YDL216C RPL39P04650 51 aa0.81□□□□□ -2.28
RRI1YDL216C YCR099CP25657 155 aa0.81□□□□□ -2.28
RRI1YDL216C AIM18P38884 321 aa0.81□□□□□ -2.28
RRI1YDL216C HSP12P22943 109 aaKnown RBP0.8□□□□□ -2.28
RRI1YDL216C YCL001W-AP87012 153 aa0.8□□□□□ -2.28
RRI1YDL216C YMR122CQ03879 124 aa0.8□□□□□ -2.28
RRI1YDL216C KTI11Q3E840 82 aa0.8□□□□□ -2.28
RRI1YDL216C COA6Q3E846 104 aa0.8□□□□□ -2.28
RRI1YDL216C MVB12P42939 101 aa0.79□□□□□ -2.28
RRI1YDL216C HHO1P53551 258 aa0.79□□□□□ -2.28
RRI1YDL216C YNL019CP53975 284 aa0.79□□□□□ -2.28
RRI1YDL216C YLR307C-AQ3E825 87 aa0.79□□□□□ -2.28
RRI1YDL216C SPG1P50088 95 aa0.78□□□□□ -2.28
RRI1YDL216C YDR366CP87287 132 aa0.78□□□□□ -2.28
RRI1YDL216C FIT3Q08907 204 aa0.78□□□□□ -2.28
RRI1YDL216C FYV5P25585 152 aa0.77□□□□□ -2.29
RRI1YDL216C RPS1BP23248 255 aaKnown RBP0.76□□□□□ -2.29
RRI1YDL216C IPI1P38803 334 aaPredicted RBP0.76□□□□□ -2.29
RRI1YDL216C MOG1P47123 218 aa0.76□□□□□ -2.29
RRI1YDL216C DDP1Q99321 188 aaKnown RBP0.76□□□□□ -2.29
RRI1YDL216C LST8P41318 303 aa0.75□□□□□ -2.29
RRI1YDL216C NCE101Q02820 53 aa0.75□□□□□ -2.29
RRI1YDL216C YLR157W-EP0CF00 54 aa0.74□□□□□ -2.29
RRI1YDL216C ANB1P19211 157 aa0.74□□□□□ -2.29
RRI1YDL216C ROX3P25046 220 aa0.74□□□□□ -2.29
RRI1YDL216C TRS20P38334 175 aa0.74□□□□□ -2.29
RRI1YDL216C LSM1P47017 172 aaKnown RBP0.74□□□□□ -2.29
RRI1YDL216C YMR320WQ04897 101 aa0.74□□□□□ -2.29
RRI1YDL216C YDR278CQ05612 105 aa0.74□□□□□ -2.29
RRI1YDL216C FUN14P18411 198 aa0.73□□□□□ -2.29
RRI1YDL216C SUA7P29055 345 aaPredicted RBP0.73□□□□□ -2.29
RRI1YDL216C LSM8P47093 109 aaKnown RBP0.73□□□□□ -2.29
RRI1YDL216C RBL2P48606 106 aaKnown RBP0.73□□□□□ -2.29
RRI1YDL216C YGR039WP53225 103 aa0.73□□□□□ -2.29
RRI1YDL216C HOR7Q05827 59 aa0.73□□□□□ -2.29
RRI1YDL216C SPC3Q12133 184 aa0.73□□□□□ -2.29
RRI1YDL216C MRPL44P19956 98 aa0.72□□□□□ -2.29
RRI1YDL216C YGR201CP42936 225 aa0.72□□□□□ -2.29
RRI1YDL216C YFR035CP43608 114 aa0.72□□□□□ -2.29
RRI1YDL216C RPS12P48589 143 aaKnown RBP0.72□□□□□ -2.29
RRI1YDL216C SOM1Q05676 74 aa0.72□□□□□ -2.29
RRI1YDL216C COA4Q05809 96 aa0.72□□□□□ -2.29
RRI1YDL216C NAT5Q08689 176 aa0.72□□□□□ -2.29
RRI1YDL216C HUG1Q6Q5K6 68 aa0.72□□□□□ -2.29
RRI1YDL216C YHR213WP0CI67 198 aa0.71□□□□□ -2.3
RRI1YDL216C NMT1P14743 455 aa0.71□□□□□ -2.3
RRI1YDL216C RPC19P28000 142 aaKnown RBP0.71□□□□□ -2.3
RRI1YDL216C ACP1P32463 125 aa0.71□□□□□ -2.3
RRI1YDL216C VPS55P47111 140 aa0.71□□□□□ -2.3
RRI1YDL216C COF1Q03048 143 aaKnown RBP0.71□□□□□ -2.3
RRI1YDL216C YOR034C-AQ3E735 80 aa0.71□□□□□ -2.3
RRI1YDL216C PFY1P07274 126 aa0.7□□□□□ -2.3
RRI1YDL216C YER137CP40083 148 aaKnown RBP0.69□□□□□ -2.3
RRI1YDL216C YDR010CQ12426 110 aa0.69□□□□□ -2.3
RRI1YDL216C YMR105W-AQ8TGS8 64 aa0.69□□□□□ -2.3
RRI1YDL216C UTP11P34247 250 aaPredicted RBP0.68□□□□□ -2.3
RRI1YDL216C SFT2P38166 215 aa0.68□□□□□ -2.3
RRI1YDL216C MPC2P38857 129 aa0.68□□□□□ -2.3
RRI1YDL216C MPC1P53157 130 aaKnown RBP0.68□□□□□ -2.3
RRI1YDL216C BRP1P53194 125 aa0.68□□□□□ -2.3
RRI1YDL216C YPL067CQ02754 198 aa0.68□□□□□ -2.3
RRI1YDL216C NHP10Q03435 203 aa0.68□□□□□ -2.3
RRI1YDL216C YOR385WQ08909 290 aa0.68□□□□□ -2.3
RRI1YDL216C HYM1P32464 399 aa0.67□□□□□ -2.3
RRI1YDL216C COX12Q01519 83 aa0.67□□□□□ -2.3
RRI1YDL216C CSN9Q03981 162 aa0.67□□□□□ -2.3
RRI1YDL216C SDH7Q04401 133 aa0.67□□□□□ -2.3
RRI1YDL216C SPC2Q04969 178 aa0.67□□□□□ -2.3
RRI1YDL216C YOR343CQ12484 108 aa0.67□□□□□ -2.3
RRI1YDL216C RPL14AP36105 138 aaKnown RBP0.66□□□□□ -2.3
RRI1YDL216C RPL14BP38754 138 aaKnown RBP0.66□□□□□ -2.3
RRI1YDL216C YGL204CP53089 101 aa0.66□□□□□ -2.3
RRI1YDL216C YNL277W-AQ3E7Z0 62 aa0.66□□□□□ -2.3
RRI1YDL216C HAP3P13434 144 aa0.65□□□□□ -2.3
RRI1YDL216C POP7P38291 140 aa0.65□□□□□ -2.3
RRI1YDL216C YGR017WP53210 297 aa0.65□□□□□ -2.3
RRI1YDL216C TVP18Q04767 167 aa0.65□□□□□ -2.3
RRI1YDL216C YLR296WQ05898 108 aa0.65□□□□□ -2.3
RRI1YDL216C ATP14Q12349 124 aa0.65□□□□□ -2.3
RRI1YDL216C RPS1AP33442 255 aaKnown RBP0.64□□□□□ -2.31
RRI1YDL216C MRPL11P36521 249 aaPredicted RBP0.64□□□□□ -2.31
RRI1YDL216C QCR10P37299 77 aa0.64□□□□□ -2.31
RRI1YDL216C YAL064WP39711 94 aa0.64□□□□□ -2.31
RRI1YDL216C YGL149WP53116 101 aa0.64□□□□□ -2.31
RRI1YDL216C YGR042WP53227 271 aa0.64□□□□□ -2.31
RRI1YDL216C YLR361C-AQ3E795 98 aa0.64□□□□□ -2.31
RRI1YDL216C PAU21P0CE86 164 aa0.64□□□□□ -2.31
RRI1YDL216C PAU22P0CE87 164 aa0.64□□□□□ -2.31
RRI1YDL216C YCR050CP25630 102 aa0.64□□□□□ -2.31
RRI1YDL216C TIM12P32830 109 aa0.64□□□□□ -2.31
RRI1YDL216C YBR013CP38215 129 aa0.64□□□□□ -2.31
RRI1YDL216C HPM1P40481 377 aa0.64□□□□□ -2.31
RRI1YDL216C MIC27P50945 234 aa0.64□□□□□ -2.31
RRI1YDL216C SGF11Q03067 99 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms