RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	YIR021W-A	Q3E739	70 aa		2.87	□□□□□ -1.95
SIR2	YDL042C	QCR8	P08525	94 aa		2.86	□□□□□ -1.95
SIR2	YDL042C	MRPL24	P36525	258 aa	Predicted RBP	2.86	□□□□□ -1.95
SIR2	YDL042C	VMA7	P39111	118 aa		2.86	□□□□□ -1.95
SIR2	YDL042C	YGR269W	P40326	108 aa		2.86	□□□□□ -1.95
SIR2	YDL042C	TAR1	Q8TGM6	124 aa		2.86	□□□□□ -1.95
SIR2	YDL042C	YHR213W	P0CI67	198 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	AUA1	P32450	94 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	YBL071C	P38185	102 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	COF1	Q03048	143 aa	Known RBP	2.85	□□□□□ -1.95
SIR2	YDL042C	YMR090W	Q04304	227 aa	Known RBP	2.85	□□□□□ -1.95
SIR2	YDL042C	CNL1	Q06333	122 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	MPC2	P38857	129 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	IMP2	P46972	177 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	CWC27	Q02770	301 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	YLR146W-A	Q2V2P1	62 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	YPR014C	Q6B0W2	109 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	YHR213W-A	Q8TGT4	77 aa		2.85	□□□□□ -1.95
SIR2	YDL042C	MRP49	P32388	137 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	EMP24	P32803	203 aa	Known RBP	2.84	□□□□□ -1.95
SIR2	YDL042C	RRT1	P38192	103 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	YPL073C	P40323	161 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	SWM2	P40342	146 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	POR2	P40478	281 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	APS2	Q00381	147 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	SHH3	Q04487	196 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	NAT3	Q06504	195 aa		2.84	□□□□□ -1.95
SIR2	YDL042C	RPS25B	P0C0T4	108 aa	Known RBP	2.83	□□□□□ -1.96
SIR2	YDL042C	AHT1	P29589	182 aa		2.83	□□□□□ -1.96
SIR2	YDL042C	ORM1	P53224	222 aa		2.83	□□□□□ -1.96
SIR2	YDL042C	YGL194C-A	Q2V2P6	80 aa		2.83	□□□□□ -1.96
SIR2	YDL042C	RPS25A	Q3E792	108 aa	Predicted RBP	2.83	□□□□□ -1.96
SIR2	YDL042C	SRL3	P36167	246 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	SNU13	P39990	126 aa	Known RBP	2.82	□□□□□ -1.96
SIR2	YDL042C	YDR366C	P87287	132 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	SAE3	P89114	91 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	YCL001W-B	Q96VH2	84 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	SHB17	P36136	271 aa	Known RBP	2.82	□□□□□ -1.96
SIR2	YDL042C	YFL019C	P43576	117 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	MIC27	P50945	234 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	YGR025W	P53216	100 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	YGR039W	P53225	103 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	HHO1	P53551	258 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	AVO2	Q04749	426 aa		2.82	□□□□□ -1.96
SIR2	YDL042C	TIR1	P10863	254 aa		2.81	□□□□□ -1.96
SIR2	YDL042C	SFT2	P38166	215 aa		2.81	□□□□□ -1.96
SIR2	YDL042C	SNF11	P38956	169 aa		2.81	□□□□□ -1.96
SIR2	YDL042C	GCV3	P39726	170 aa	Predicted RBP	2.81	□□□□□ -1.96
SIR2	YDL042C	YMR253C	Q04835	414 aa		2.81	□□□□□ -1.96
SIR2	YDL042C	YHR007C-A	Q07074	71 aa		2.81	□□□□□ -1.96
SIR2	YDL042C	QCR9	P22289	66 aa		2.8	□□□□□ -1.96
SIR2	YDL042C	LSM2	P38203	95 aa	Known RBP	2.8	□□□□□ -1.96
SIR2	YDL042C	YMR007W	Q03675	126 aa		2.8	□□□□□ -1.96
SIR2	YDL042C	GPI2	P46961	280 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	YGR017W	P53210	297 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	YNL146C-A	Q3E7Z1	64 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
SIR2	YDL042C	PAM17	P36147	197 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	TMA23	Q03525	211 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	ZEO1	Q08245	113 aa		2.79	□□□□□ -1.96
SIR2	YDL042C	SPC25	P40014	221 aa		2.78	□□□□□ -1.96
SIR2	YDL042C	SPI1	P40092	148 aa		2.78	□□□□□ -1.96
SIR2	YDL042C	FMP49	A0A023PZB3	126 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	TRS20	P38334	175 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	YBR292C	P38357	123 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	YCL001W-A	P87012	153 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	COX12	Q01519	83 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	FIT2	Q08906	153 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	FCF2	Q12035	217 aa	Predicted RBP	2.77	□□□□□ -1.97
SIR2	YDL042C	YOR015W	Q12169	119 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	YLR118C	Q12354	227 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	COX19	Q3E731	98 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	YLR412C-A	Q3E742	68 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	YOR011W-A	Q3E807	68 aa		2.77	□□□□□ -1.97
SIR2	YDL042C	AIM11	P87275	137 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	CCW12	Q12127	133 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	YNL277W-A	Q3E7Z0	62 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	ATP5	P09457	212 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	YER181C	P40097	107 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	EMC5	P40540	141 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	YFR035C	P43608	114 aa		2.76	□□□□□ -1.97
SIR2	YDL042C	SRP21	P32342	167 aa		2.75	□□□□□ -1.97
SIR2	YDL042C	SFT1	P43682	97 aa		2.75	□□□□□ -1.97
SIR2	YDL042C	DAD4	P69851	72 aa		2.75	□□□□□ -1.97
SIR2	YDL042C	HSP12	P22943	109 aa	Known RBP	2.74	□□□□□ -1.97
SIR2	YDL042C	RPL14A	P36105	138 aa	Known RBP	2.74	□□□□□ -1.97
SIR2	YDL042C	RPL14B	P38754	138 aa	Known RBP	2.74	□□□□□ -1.97
SIR2	YDL042C	YHR140W	P38842	239 aa		2.74	□□□□□ -1.97
SIR2	YDL042C	YHR173C	P38864	112 aa		2.74	□□□□□ -1.97
SIR2	YDL042C	PAU4	P53427	120 aa		2.74	□□□□□ -1.97
SIR2	YDL042C	YPR145C-A	Q2V2P0	78 aa		2.74	□□□□□ -1.97
SIR2	YDL042C	YKR070W	P36151	352 aa	Known RBP	2.73	□□□□□ -1.97
SIR2	YDL042C	YHL018W	P38744	120 aa	Predicted RBP	2.73	□□□□□ -1.97
SIR2	YDL042C	HUA1	P40325	198 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	TOM7	P53507	60 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	COA4	Q05809	96 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	VAR1	P02381	398 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	PAU1	P0CE88	120 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	PAU14	P0CE89	120 aa		2.73	□□□□□ -1.97
SIR2	YDL042C	PAU6	P0CE90	120 aa		2.73	□□□□□ -1.97

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