RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PRKCEQ02156 737 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 NR5A1Q13285 461 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ALX1Q15699 326 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CCL14Q16627 93 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 MAPKAPK3Q16644 382 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 MCMDC2Q4G0Z9 681 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SGO2Q562F6 1265 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 XKR9Q5GH70 373 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 TJAP1Q5JTD0 557 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GRTP1Q5TC63 336 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 DAB2IPQ5VWQ8 1189 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 LHX8Q68G74 356 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GPR153Q6NV75 609 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CYB5D1Q6P9G0 228 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 FOXR1Q6PIV2 292 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CHRDL2Q6WN34 429 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SPOCD1Q6ZMY3 1216 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CAPN12Q6ZSI9 719 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ANO5Q75V66 913 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 MAMDC2Q7Z304 686 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF467Q7Z7K2 595 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 TBC1D1Q86TI0 1168 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ADCK1Q86TW2 530 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 JAMLQ86YT9 394 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CCNJLQ8IV13 435 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 FAM26EQ8N5C1 309 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GPR161Q8N6U8 529 aaKnown RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GALNT11Q8NCW6 608 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CHST13Q8NET6 341 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 OR10Z1Q8NGY1 313 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CEP70Q8NHQ1 597 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GOT1L1Q8NHS2 421 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 RFWD2Q8NHY2 731 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CHURC1Q8WUH1 139 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 STARD8Q92502 1023 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 C19orf60Q96EN9 201 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 METTL2AQ96IZ6 378 aaKnown RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 C7orf34Q96L11 122 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GDAP1L1Q96MZ0 367 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 FERD3LQ96RJ6 166 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ELAC2Q9BQ52 826 aaKnown RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 MRPL1Q9BYD6 325 aaKnown RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PITHD1Q9GZP4 211 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 VCXQ9H320 206 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 RNF41Q9H4P4 317 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PFDN4Q9NQP4 134 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 PAQR5Q9NXK6 330 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 MTMR4Q9NYA4 1195 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 GPRC5BQ9NZH0 403 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SAMD15Q9P1V8 674 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 BAG5Q9UL15 447 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-216ENST00000523088 COMMD3-BMI1R4GMX3 469 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 SMCHD1A6NHR9 2005 aa7.89□□□□□ -1.15
HDAC3-216ENST00000523088 A0A088AWK7 358 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 A0A1B0GVC2 190 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 FRMD3A2A2Y4 597 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 LRRIQ4A6NIV6 560 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 B8ZZF3 427 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 STMND1H3BQB6 276 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 IKBKBO14920 756 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SPTLC1O15269 473 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 PDPK1O15530 556 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 DKC1O60832 514 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 MAFO75444 373 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 TIPRLO75663 272 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 KLHL2O95198 593 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 ADCY5O95622 1261 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 IGHA2P01877 340 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 LMNAP02545 664 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 RPS17P08708 135 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 POLR2MP0CAP2 368 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 RARBP10826 455 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 BMP3P12645 472 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SERPINB3P29508 390 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CCND3P30281 292 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 KCNJ6P48051 423 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SERPINB4P48594 390 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 FXR1P51114 621 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 ARSDP51689 593 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CLCN4P51793 760 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 NKX3-2P78367 333 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 IL1RL1Q01638 556 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 EVX2Q03828 476 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 TBL3Q12788 808 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CDC20Q12834 499 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SGCGQ13326 291 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 STILQ15468 1287 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 TKFCQ3LXA3 575 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CCNJQ5T5M9 372 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SNRNP48Q6IEG0 339 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 RNF180Q86T96 592 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF677Q86XU0 584 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CLEC10AQ8IUN9 316 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms