RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 AFF4Q9UHB7 1163 aaKnown RBP17.48■□□□□ 0.39
LMNB2-201ENST00000325327 SF3B1O75533 1304 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■■■■■ 109.6
LMNB2-201ENST00000325327 CCDC151A5D8V7 595 aa17.48■□□□□ 0.39
LMNB2-201ENST00000325327 SPTLC1O15269 473 aa17.48■□□□□ 0.39
LMNB2-201ENST00000325327 YWHAZP63104 245 aaKnown RBP17.48■□□□□ 0.39
LMNB2-201ENST00000325327 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
LMNB2-201ENST00000325327 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
LMNB2-201ENST00000325327 PPM1LQ5SGD2 360 aa17.48■□□□□ 0.39
LMNB2-201ENST00000325327 KCTD10Q9H3F6 313 aa17.48■□□□□ 0.39
LMNB2-201ENST00000325327 CACNG4Q9UBN1 327 aa17.48■□□□□ 0.39
LMNB2-201ENST00000325327 F5H5T6 163 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 ZACNQ401N2 412 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 DDX42Q86XP3 938 aaKnown RBP eCLIP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 SMARCD1Q96GM5 515 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 CELF6Q96J87 481 aaKnown RBP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 PTPRZ1P23471 2315 aaPredicted RBP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 FGBP02675 491 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 NFIL3Q16649 462 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 DEFB106AQ8N104 65 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 TRIB2Q92519 343 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 NIFKQ9BYG3 293 aaKnown RBP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 OPLAHO14841 1288 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 GJA5P36382 358 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 CLCN6P51797 869 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 P3H1Q32P28 736 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 FIGNQ5HY92 759 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 HYIQ5T013 277 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 SLFN11Q7Z7L1 901 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 ARHGAP18Q8N392 663 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 EMILIN2Q9BXX0 1053 aa17.47■□□□□ 0.39
LMNB2-201ENST00000325327 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 S100BP04271 92 aaPredicted RBP17.47■□□□□ 0.39
LMNB2-201ENST00000325327 DDX3XO00571 662 aaKnown RBP eCLIP17.46■□□□□ 0.396e-30■■■□□ 17.1
LMNB2-201ENST00000325327 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
LMNB2-201ENST00000325327 SETSIPP0DME0 302 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 GZMAP12544 262 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 DDR2Q16832 855 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 CNPY3Q9BT09 278 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 RNF40O75150 1001 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 PAMP19021 973 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 PRMT2P55345 433 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 PLPP4Q5VZY2 271 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 ZSWIM2Q8NEG5 633 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 LRRC8CQ8TDW0 803 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 APOL2Q9BQE5 337 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 CORO1BQ9BR76 489 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 AP4E1Q9UPM8 1137 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 CASP8Q14790 479 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 ATAD1Q8NBU5 361 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
LMNB2-201ENST00000325327 CDC26Q8NHZ8 85 aa17.46■□□□□ 0.39
LMNB2-201ENST00000325327 MOXD2PA6NHM9 499 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CBX4O00257 560 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 GRM5P41594 1212 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 RTP1P59025 263 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CLEC16AQ2KHT3 1053 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 DENND1BQ6P3S1 775 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 NT5DC4Q86YG4 428 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ZIC5Q96T25 663 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 VPS28Q9UK41 221 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 USP18Q9UMW8 372 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 TSPAN1O60635 241 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 GPC4O75487 556 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CTCFP49711 727 aaPredicted RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 TUSC3Q13454 348 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CUL1Q13616 776 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 FBXO38Q6PIJ6 1188 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 SRRM1Q8IYB3 904 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 TLR8Q9NR97 1041 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 NDFIP2Q9NV92 336 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CXCL14O95715 111 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ASS1P00966 412 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ARL2P36404 184 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 TUFMP49411 452 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 WDR59Q6PJI9 974 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 WHAMMQ8TF30 809 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 C22orf31O95567 290 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 F9P00740 461 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 SLC2A3P11169 496 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 THOC1Q96FV9 657 aaKnown RBP17.45■□□□□ 0.38
LMNB2-201ENST00000325327 CHD4Q14839 1912 aa17.45■□□□□ 0.38
LMNB2-201ENST00000325327 PDK1Q15118 436 aa17.44■□□□□ 0.38
LMNB2-201ENST00000325327 CST9Q5W186 159 aa17.44■□□□□ 0.38
LMNB2-201ENST00000325327 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
LMNB2-201ENST00000325327 TPGS1Q6ZTW0 290 aa17.44■□□□□ 0.38
LMNB2-201ENST00000325327 TAS2R14Q9NYV8 317 aa17.44■□□□□ 0.38
LMNB2-201ENST00000325327 MORF4L1Q9UBU8 362 aa17.44■□□□□ 0.38
LMNB2-201ENST00000325327 UNCXA6NJT0 531 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms