RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 TY1B-PR1P0C2I9 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-PR2P0C2J0 1756 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-JR1P47098 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-JR2P47100 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-ML2Q03434 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-ER1Q03612 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-DR1Q03855 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-MR2Q04670 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-ML1Q04711 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-GR1Q12141 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-GR2Q12269 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-OLQ12273 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-PLQ12414 1755 aaKnown RBP-5.03□□□□□ -3.21
snR53snR53 TY1B-ORQ92393 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-DR3Q99231 1755 aa-5.03□□□□□ -3.21
snR53snR53 YOR097CQ12274 175 aaPredicted RBP-5.03□□□□□ -3.21
snR53snR53 YLR285C-AQ3E771 56 aa-5.04□□□□□ -3.22
snR53snR53 PAU21P0CE86 164 aa-5.05□□□□□ -3.22
snR53snR53 PAU22P0CE87 164 aa-5.05□□□□□ -3.22
snR53snR53 YBL044WP38194 122 aa-5.05□□□□□ -3.22
snR53snR53 RPS28AQ3E7X9 67 aaPredicted RBP-5.05□□□□□ -3.22
snR53snR53 JAC1P53193 184 aa-5.07□□□□□ -3.22
snR53snR53 ECM12O13529 151 aa-5.08□□□□□ -3.22
snR53snR53 EGD2P38879 174 aaKnown RBP-5.08□□□□□ -3.22
snR53snR53 CYB5P40312 120 aa-5.08□□□□□ -3.22
snR53snR53 HSP10P38910 106 aa-5.09□□□□□ -3.22
snR53snR53 YNL140CP53910 189 aa-5.09□□□□□ -3.22
snR53snR53 QCR7P00128 127 aa-5.1□□□□□ -3.23
snR53snR53 CBF1P17106 351 aa-5.1□□□□□ -3.23
snR53snR53 YRF1-1P0CX20 1796 aa-5.11□□□□□ -3.23
snR53snR53 YRF1-5P0CX21 1796 aa-5.11□□□□□ -3.23
snR53snR53 YRF1-8P0CX22 1796 aa-5.11□□□□□ -3.23
snR53snR53 ORM1P53224 222 aa-5.11□□□□□ -3.23
snR53snR53 SDH7Q04401 133 aa-5.11□□□□□ -3.23
snR53snR53 QCR10P37299 77 aa-5.12□□□□□ -3.23
snR53snR53 PAM16P42949 149 aa-5.13□□□□□ -3.23
snR53snR53 LSM1P47017 172 aaKnown RBP-5.14□□□□□ -3.23
snR53snR53 MRPS17Q03246 237 aaPredicted RBP-5.14□□□□□ -3.23
snR53snR53 PET54P10834 293 aa-5.15□□□□□ -3.23
snR53snR53 RPC19P28000 142 aaKnown RBP-5.15□□□□□ -3.23
snR53snR53 SEC59P20048 519 aa-5.16□□□□□ -3.24
snR53snR53 RPL38P49167 78 aaKnown RBP-5.16□□□□□ -3.24
snR53snR53 YPD1Q07688 167 aa-5.16□□□□□ -3.24
snR53snR53 RAD50P12753 1312 aa-5.17□□□□□ -3.24
snR53snR53 RPL30P14120 105 aaKnown RBP-5.17□□□□□ -3.24
snR53snR53 YER181CP40097 107 aa-5.17□□□□□ -3.24
snR53snR53 LSM8P47093 109 aaKnown RBP-5.17□□□□□ -3.24
snR53snR53 MIC10Q96VH5 97 aa-5.17□□□□□ -3.24
snR53snR53 BPH1P25356 2167 aa-5.17□□□□□ -3.24
snR53snR53 YJL197C-AP0C5P0 93 aa-5.19□□□□□ -3.24
snR53snR53 DLS1P40366 167 aa-5.19□□□□□ -3.24
snR53snR53 HSK3P69852 69 aa-5.19□□□□□ -3.24
snR53snR53 HSP12P22943 109 aaKnown RBP-5.2□□□□□ -3.24
snR53snR53 SNO1Q03144 224 aa-5.2□□□□□ -3.24
snR53snR53 LSM3P57743 89 aaKnown RBP-5.21□□□□□ -3.24
snR53snR53 YDR476CQ03362 224 aa-5.21□□□□□ -3.24
snR53snR53 PDX3P38075 228 aaKnown RBP-5.22□□□□□ -3.25
snR53snR53 SHG1P38337 142 aa-5.22□□□□□ -3.25
snR53snR53 YIL014C-AQ02598 104 aa-5.22□□□□□ -3.25
snR53snR53 AIM11P87275 137 aa-5.23□□□□□ -3.25
snR53snR53 YCR101CP25607 182 aa-5.24□□□□□ -3.25
snR53snR53 YDR210WQ03482 75 aa-5.24□□□□□ -3.25
snR53snR53 IMP2P46972 177 aa-5.25□□□□□ -3.25
snR53snR53 DNA2P38859 1522 aa-5.25□□□□□ -3.25
snR53snR53 TRM732Q03496 1420 aa-5.25□□□□□ -3.25
snR53snR53 MMS1Q06211 1407 aa-5.25□□□□□ -3.25
snR53snR53 MSS2P40990 351 aa-5.26□□□□□ -3.25
snR53snR53 ROX3P25046 220 aa-5.27□□□□□ -3.25
snR53snR53 RPL14AP36105 138 aaKnown RBP-5.27□□□□□ -3.25
snR53snR53 PGA2P53903 129 aa-5.27□□□□□ -3.25
snR53snR53 YGR201CP42936 225 aa-5.28□□□□□ -3.25
snR53snR53 SLO1Q3E784 85 aa-5.28□□□□□ -3.25
snR53snR53 CMD1P06787 147 aaKnown RBP-5.29□□□□□ -3.26
snR53snR53 TRS20P38334 175 aa-5.29□□□□□ -3.26
snR53snR53 RSM18P40033 138 aa-5.29□□□□□ -3.26
snR53snR53 RGI1P40043 161 aaPredicted RBP-5.29□□□□□ -3.26
snR53snR53 EFG1Q3E705 233 aaKnown RBP-5.29□□□□□ -3.26
snR53snR53 YLR363W-AQ3E747 85 aa-5.29□□□□□ -3.26
snR53snR53 NSL1Q12143 216 aa-5.3□□□□□ -3.26
snR53snR53 YGR042WP53227 271 aa-5.31□□□□□ -3.26
snR53snR53 BUD4P47136 1447 aa-5.32□□□□□ -3.26
snR53snR53 SSN2P38931 1420 aa-5.33□□□□□ -3.26
snR53snR53 DER1P38307 211 aa-5.34□□□□□ -3.26
snR53snR53 YER187WP40102 141 aa-5.34□□□□□ -3.26
snR53snR53 APQ12P40532 138 aa-5.35□□□□□ -3.27
snR53snR53 MIX14Q04341 121 aa-5.35□□□□□ -3.27
snR53snR53 YKT6P36015 200 aaKnown RBP-5.36□□□□□ -3.27
snR53snR53 YBR292CP38357 123 aa-5.36□□□□□ -3.27
snR53snR53 YPL038W-AQ3E7B4 63 aa-5.36□□□□□ -3.27
snR53snR53 HMRA2P0CY13 119 aa-5.37□□□□□ -3.27
snR53snR53 YLR042CQ07990 161 aa-5.37□□□□□ -3.27
snR53snR53 YLR050CQ12155 161 aaKnown RBP-5.37□□□□□ -3.27
snR53snR53 TY2B-LR1P0C2J3 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-FP0CX63 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-GR2P0CX64 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-CP25384 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-DR2Q03494 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-DR3Q07791 1770 aaKnown RBP-5.39□□□□□ -3.27
snR53snR53 TY2B-OR1Q12113 1770 aa-5.39□□□□□ -3.27
snR53snR53 TY2B-DR1Q12472 1770 aa-5.39□□□□□ -3.27
Retrieved 100 of 5,963 RNA–protein pairs in 112.3 ms