RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	CDC43	P18898	376 aa		3.18	□□□□□ -1.9
SSO1	YPL232W	ARO2	P28777	376 aa	Known RBP	3.18	□□□□□ -1.9
SSO1	YPL232W	DUT1	P33317	147 aa		3.18	□□□□□ -1.9
SSO1	YPL232W	YER076C	P40049	302 aa		3.18	□□□□□ -1.9
SSO1	YPL232W	MRPL31	P14063	131 aa	Predicted RBP	3.17	□□□□□ -1.9
SSO1	YPL232W	TAL1	P15019	335 aa	Known RBP	3.17	□□□□□ -1.9
SSO1	YPL232W	YKL069W	P36088	180 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	RIB5	P38145	238 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	YBR090C	P38253	122 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	CYB5	P40312	120 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	MOG1	P47123	218 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	PAU4	P53427	120 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	ADD37	Q03233	198 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	ANT1	Q06497	328 aa		3.17	□□□□□ -1.9
SSO1	YPL232W	ECM12	O13529	151 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	RPL42A	P0CX27	106 aa	Known RBP	3.16	□□□□□ -1.9
SSO1	YPL232W	RPL42B	P0CX28	106 aa	Known RBP	3.16	□□□□□ -1.9
SSO1	YPL232W	FRS1	P15624	595 aa	Known RBP	3.16	□□□□□ -1.9
SSO1	YPL232W	MRPS9	P38120	278 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	YHR140W	P38842	239 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	TAD2	P47058	250 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	OST3	P48439	350 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	SDS23	P53172	527 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	EOS1	P53938	366 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	SME1	Q12330	94 aa	Predicted RBP	3.16	□□□□□ -1.9
SSO1	YPL232W	CMC4	Q3E7A9	73 aa		3.16	□□□□□ -1.9
SSO1	YPL232W	RPS22A	P0C0W1	130 aa	Known RBP	3.15	□□□□□ -1.91
SSO1	YPL232W	SRB7	P47822	140 aa		3.15	□□□□□ -1.91
SSO1	YPL232W	YGL149W	P53116	101 aa		3.15	□□□□□ -1.91
SSO1	YPL232W	TVP18	Q04767	167 aa		3.15	□□□□□ -1.91
SSO1	YPL232W	ENV10	Q99382	181 aa		3.15	□□□□□ -1.91
SSO1	YPL232W	YLR415C	O13578	112 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU1	P0CE88	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU14	P0CE89	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU6	P0CE90	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU18	P0CE91	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU8	P0CE92	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU11	P0CE93	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU13	P38725	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	GCV3	P39726	170 aa	Predicted RBP	3.14	□□□□□ -1.91
SSO1	YPL232W	SEC72	P39742	193 aa	Known RBP	3.14	□□□□□ -1.91
SSO1	YPL232W	DCV1	P43595	202 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU10	Q03050	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	GPI19	Q04082	140 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU20	Q08322	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	PAU9	Q3E770	120 aa		3.14	□□□□□ -1.91
SSO1	YPL232W	YGL088W	P53151	121 aa		3.13	□□□□□ -1.91
SSO1	YPL232W	COX19	Q3E731	98 aa		3.13	□□□□□ -1.91
SSO1	YPL232W	TMA7	Q3E764	64 aa	Known RBP	3.13	□□□□□ -1.91
SSO1	YPL232W	YBR085C-A	O43137	85 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	RPL27A	P0C2H6	136 aa	Known RBP	3.12	□□□□□ -1.91
SSO1	YPL232W	MSK1	P32048	576 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	SRP21	P32342	167 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	YBR209W	P38311	105 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	RPB11	P38902	120 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	SPC25	P40014	221 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	GLO1	P50107	326 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	ARC18	Q05933	178 aa	Known RBP	3.12	□□□□□ -1.91
SSO1	YPL232W	YLR118C	Q12354	227 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	YGL041C-B	Q3E750	60 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	YMR175W-A	Q3E766	64 aa		3.12	□□□□□ -1.91
SSO1	YPL232W	YLR156W	P0CE96	114 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	YLR159W	P0CE97	114 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	YLR161W	P0CE98	114 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	MAG1	P22134	296 aa	Known RBP	3.11	□□□□□ -1.91
SSO1	YPL232W	YKL070W	P36087	169 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	YBR219C	P38317	127 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	YER085C	P40058	173 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	CSM4	Q08955	156 aa		3.11	□□□□□ -1.91
SSO1	YPL232W	ZRT1	P32804	376 aa		3.1	□□□□□ -1.91
SSO1	YPL232W	SRP14	P38985	146 aa		3.1	□□□□□ -1.91
SSO1	YPL232W	VTC1	P40046	129 aa	RIP-Chip data	3.1	□□□□□ -1.91	not detected
SSO1	YPL232W	YGL194C-A	Q2V2P6	80 aa		3.1	□□□□□ -1.91
SSO1	YPL232W	YGR149W	P48236	432 aa		3.09	□□□□□ -1.91
SSO1	YPL232W	THG1	P53215	237 aa	Known RBP	3.09	□□□□□ -1.91
SSO1	YPL232W	GIM5	Q04493	163 aa		3.09	□□□□□ -1.91
SSO1	YPL232W	YCL001W-B	Q96VH2	84 aa		3.09	□□□□□ -1.91
SSO1	YPL232W	AIM29	P36154	155 aa		3.08	□□□□□ -1.92
SSO1	YPL232W	SDH8	P38345	138 aa		3.08	□□□□□ -1.92
SSO1	YPL232W	GTO3	Q04806	366 aa		3.08	□□□□□ -1.92
SSO1	YPL232W	ADH2	P00331	348 aa	Known RBP	3.07	□□□□□ -1.92
SSO1	YPL232W	UBC4	P15731	148 aa		3.07	□□□□□ -1.92
SSO1	YPL232W	SAR1	P20606	190 aa	Known RBP	3.07	□□□□□ -1.92
SSO1	YPL232W	QRI5	P32344	111 aa		3.07	□□□□□ -1.92
SSO1	YPL232W	VMA7	P39111	118 aa		3.07	□□□□□ -1.92
SSO1	YPL232W	YAR029W	P39549	74 aa		3.07	□□□□□ -1.92
SSO1	YPL232W	YAL065C	O13511	128 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	TRP1	P00912	224 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	SHG1	P38337	142 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	PAU7	P39545	55 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	YEL008W	P40001	126 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	YIL024C	P40543	189 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	URM1	P40554	99 aa	Predicted RBP	3.06	□□□□□ -1.92
SSO1	YPL232W	CWP2	P43497	92 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	PAU5	P43575	122 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	YJR146W	P47174	117 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	YOR268C	Q08734	132 aa		3.06	□□□□□ -1.92
SSO1	YPL232W	YKR032W	P36127	104 aa		3.05	□□□□□ -1.92
SSO1	YPL232W	YKR070W	P36151	352 aa	Known RBP	3.05	□□□□□ -1.92
SSO1	YPL232W	HIT1	P46973	164 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms