RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W IPT1P38954 527 aa0.83□□□□□ -2.28
BRO1YPL084W YIL102CP40488 101 aa0.83□□□□□ -2.28
BRO1YPL084W EFM5P53200 248 aaKnown RBP0.83□□□□□ -2.28
BRO1YPL084W CDC39P25655 2108 aaKnown RBP0.83□□□□□ -2.28
BRO1YPL084W UGX2P32772 223 aa0.83□□□□□ -2.28
BRO1YPL084W ATP19P81451 68 aa0.83□□□□□ -2.28
BRO1YPL084W UBR1P19812 1950 aa0.82□□□□□ -2.28
BRO1YPL084W DDR48P18899 430 aaKnown RBP0.82□□□□□ -2.28
BRO1YPL084W EST3Q03096 181 aa0.82□□□□□ -2.28
BRO1YPL084W PKR1Q03880 122 aaKnown RBP0.82□□□□□ -2.28
BRO1YPL084W RAV2Q03956 351 aa0.82□□□□□ -2.28
BRO1YPL084W SCS22Q6Q595 175 aa0.81□□□□□ -2.28
BRO1YPL084W UTP10P42945 1769 aaKnown RBP0.81□□□□□ -2.28
BRO1YPL084W YER188C-AP0C0V2 99 aa0.81□□□□□ -2.28
BRO1YPL084W HSP12P22943 109 aaKnown RBP0.81□□□□□ -2.28
BRO1YPL084W HYP2P23301 157 aaKnown RBP0.81□□□□□ -2.28
BRO1YPL084W IPI1P38803 334 aaPredicted RBP0.81□□□□□ -2.28
BRO1YPL084W AIM36Q03798 255 aa0.81□□□□□ -2.28
BRO1YPL084W YPR153WQ06537 140 aa0.81□□□□□ -2.28
BRO1YPL084W YCR001WP25347 104 aa0.8□□□□□ -2.28
BRO1YPL084W MOG1P47123 218 aa0.8□□□□□ -2.28
BRO1YPL084W HKR1P41809 1802 aa0.8□□□□□ -2.28
BRO1YPL084W GPI2P46961 280 aa0.8□□□□□ -2.28
BRO1YPL084W GPI11Q06636 219 aa0.8□□□□□ -2.28
BRO1YPL084W YOL013W-AP0C272 63 aaPredicted RBP0.79□□□□□ -2.28
BRO1YPL084W TMA23Q03525 211 aa0.79□□□□□ -2.28
BRO1YPL084W FMP49A0A023PZB3 126 aa0.79□□□□□ -2.28
BRO1YPL084W ATG8P38182 117 aaRIP-Chip data0.79□□□□□ -2.28not detected
BRO1YPL084W ECM29P38737 1868 aa0.79□□□□□ -2.28
BRO1YPL084W SED1Q01589 338 aa0.78□□□□□ -2.28
BRO1YPL084W YMR320WQ04897 101 aa0.78□□□□□ -2.28
BRO1YPL084W NHP6AP11632 93 aaKnown RBP0.78□□□□□ -2.28
BRO1YPL084W YNL122CP53921 115 aaPredicted RBP0.78□□□□□ -2.28
BRO1YPL084W COX5BP00425 151 aa0.77□□□□□ -2.29
BRO1YPL084W YGR201CP42936 225 aa0.77□□□□□ -2.29
BRO1YPL084W RPL33AP05744 107 aaKnown RBP0.76□□□□□ -2.29
BRO1YPL084W YCL001W-AP87012 153 aa0.76□□□□□ -2.29
BRO1YPL084W YDR366CP87287 132 aa0.76□□□□□ -2.29
BRO1YPL084W SUI1P32911 108 aaKnown RBP0.76□□□□□ -2.29
BRO1YPL084W RPS1BP23248 255 aaKnown RBP0.75□□□□□ -2.29
BRO1YPL084W FYV5P25585 152 aa0.75□□□□□ -2.29
BRO1YPL084W SEN15Q04675 128 aa0.75□□□□□ -2.29
BRO1YPL084W VMA10P48836 114 aaKnown RBP0.75□□□□□ -2.29
BRO1YPL084W HUT1Q12520 339 aa0.75□□□□□ -2.29
BRO1YPL084W RIB3Q99258 208 aa0.75□□□□□ -2.29
BRO1YPL084W DIE2P50076 525 aa0.74□□□□□ -2.29
BRO1YPL084W SOM1Q05676 74 aa0.74□□□□□ -2.29
BRO1YPL084W DDP1Q99321 188 aaKnown RBP0.74□□□□□ -2.29
BRO1YPL084W YGL014C-AP0C5N1 53 aa0.74□□□□□ -2.29
BRO1YPL084W RBL2P48606 106 aaKnown RBP0.74□□□□□ -2.29
BRO1YPL084W HHO1P53551 258 aa0.74□□□□□ -2.29
BRO1YPL084W COF1Q03048 143 aaKnown RBP0.74□□□□□ -2.29
BRO1YPL084W YOR385WQ08909 290 aa0.74□□□□□ -2.29
BRO1YPL084W SRL3P36167 246 aa0.73□□□□□ -2.29
BRO1YPL084W PHB1P40961 287 aa0.73□□□□□ -2.29
BRO1YPL084W LSM1P47017 172 aaKnown RBP0.73□□□□□ -2.29
BRO1YPL084W MGR2Q02889 113 aa0.73□□□□□ -2.29
BRO1YPL084W RAF1Q06891 181 aa0.73□□□□□ -2.29
BRO1YPL084W HAP2P06774 265 aa0.73□□□□□ -2.29
BRO1YPL084W HHY1P39982 102 aa0.73□□□□□ -2.29
BRO1YPL084W YOR072WQ08486 104 aa0.73□□□□□ -2.29
BRO1YPL084W SPC3Q12133 184 aa0.73□□□□□ -2.29
BRO1YPL084W MHF1Q3E835 90 aa0.73□□□□□ -2.29
BRO1YPL084W RPS22AP0C0W1 130 aaKnown RBP0.72□□□□□ -2.29
BRO1YPL084W LSM8P47093 109 aaKnown RBP0.72□□□□□ -2.29
BRO1YPL084W YGR039WP53225 103 aa0.72□□□□□ -2.29
BRO1YPL084W RPS22BQ3E7Y3 130 aaKnown RBP0.72□□□□□ -2.29
BRO1YPL084W YHR213W-BQ8TGK1 99 aa0.72□□□□□ -2.29
BRO1YPL084W SPG1P50088 95 aa0.72□□□□□ -2.29
BRO1YPL084W YDR524C-BQ3E6R4 66 aa0.72□□□□□ -2.29
BRO1YPL084W YHR140WP38842 239 aa0.71□□□□□ -2.3
BRO1YPL084W YMR122CQ03879 124 aa0.71□□□□□ -2.3
BRO1YPL084W NAT5Q08689 176 aa0.71□□□□□ -2.3
BRO1YPL084W LST8P41318 303 aa0.7□□□□□ -2.3
BRO1YPL084W YNL019CP53975 284 aa0.7□□□□□ -2.3
BRO1YPL084W IRC21Q04772 201 aa0.7□□□□□ -2.3
BRO1YPL084W RPS1AP33442 255 aaKnown RBP0.7□□□□□ -2.3
BRO1YPL084W YJL009WP47078 108 aa0.7□□□□□ -2.3
BRO1YPL084W EMC4P53073 190 aa0.7□□□□□ -2.3
BRO1YPL084W YHR213WP0CI67 198 aa0.69□□□□□ -2.3
BRO1YPL084W NMT1P14743 455 aa0.69□□□□□ -2.3
BRO1YPL084W SFT2P38166 215 aa0.69□□□□□ -2.3
BRO1YPL084W RPC19P28000 142 aaKnown RBP0.69□□□□□ -2.3
BRO1YPL084W BRP1P53194 125 aa0.69□□□□□ -2.3
BRO1YPL084W PRM3Q08931 133 aa0.69□□□□□ -2.3
BRO1YPL084W FUN14P18411 198 aa0.68□□□□□ -2.3
BRO1YPL084W ANB1P19211 157 aa0.68□□□□□ -2.3
BRO1YPL084W MRPL44P19956 98 aa0.68□□□□□ -2.3
BRO1YPL084W HPM1P40481 377 aa0.68□□□□□ -2.3
BRO1YPL084W YPL067CQ02754 198 aa0.68□□□□□ -2.3
BRO1YPL084W COA4Q05809 96 aa0.68□□□□□ -2.3
BRO1YPL084W LAA1P39526 2014 aa0.67□□□□□ -2.3
BRO1YPL084W YIL046W-AQ3E7Z4 54 aa0.67□□□□□ -2.3
BRO1YPL084W YCR050CP25630 102 aa0.67□□□□□ -2.3
BRO1YPL084W QCR10P37299 77 aa0.67□□□□□ -2.3
BRO1YPL084W RPL14AP36105 138 aaKnown RBP0.66□□□□□ -2.3
BRO1YPL084W RPL14BP38754 138 aaKnown RBP0.66□□□□□ -2.3
BRO1YPL084W BRR2P32639 2163 aaKnown RBP0.66□□□□□ -2.3
BRO1YPL084W UTP11P34247 250 aaPredicted RBP0.66□□□□□ -2.3
BRO1YPL084W CYC2P38909 366 aa0.66□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms