RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C UBI4P0CG63 381 aaKnown RBP5.34□□□□□ -1.55
PUP1YOR157C YOR105WQ08504 108 aa5.34□□□□□ -1.55
PUP1YOR157C SMD3P43321 101 aaKnown RBP5.33□□□□□ -1.56
PUP1YOR157C ANT1Q06497 328 aa5.33□□□□□ -1.56
PUP1YOR157C MRPS9P38120 278 aa5.32□□□□□ -1.56
PUP1YOR157C YGL088WP53151 121 aa5.32□□□□□ -1.56
PUP1YOR157C FRS1P15624 595 aaKnown RBP5.31□□□□□ -1.56
PUP1YOR157C YBR209WP38311 105 aa5.31□□□□□ -1.56
PUP1YOR157C YHR140WP38842 239 aa5.31□□□□□ -1.56
PUP1YOR157C YER076CP40049 302 aa5.31□□□□□ -1.56
PUP1YOR157C RPC10P40422 70 aa5.31□□□□□ -1.56
PUP1YOR157C YGL149WP53116 101 aa5.31□□□□□ -1.56
PUP1YOR157C PAU4P53427 120 aa5.31□□□□□ -1.56
PUP1YOR157C ATP19P81451 68 aa5.31□□□□□ -1.56
PUP1YOR157C MRPL31P14063 131 aaPredicted RBP5.3□□□□□ -1.56
PUP1YOR157C MAG1P22134 296 aaKnown RBP5.3□□□□□ -1.56
PUP1YOR157C TVP18Q04767 167 aa5.3□□□□□ -1.56
PUP1YOR157C YGL194C-AQ2V2P6 80 aa5.3□□□□□ -1.56
PUP1YOR157C YKL070WP36087 169 aa5.28□□□□□ -1.56
PUP1YOR157C YER085CP40058 173 aa5.28□□□□□ -1.56
PUP1YOR157C CYB5P40312 120 aa5.28□□□□□ -1.56
PUP1YOR157C DCV1P43595 202 aa5.28□□□□□ -1.56
PUP1YOR157C OST3P48439 350 aa5.28□□□□□ -1.56
PUP1YOR157C GCV3P39726 170 aaPredicted RBP5.27□□□□□ -1.57
PUP1YOR157C SDS23P53172 527 aa5.27□□□□□ -1.57
PUP1YOR157C CSM4Q08955 156 aa5.27□□□□□ -1.57
PUP1YOR157C RPS22AP0C0W1 130 aaKnown RBP5.26□□□□□ -1.57
PUP1YOR157C PAU1P0CE88 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU14P0CE89 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU6P0CE90 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU18P0CE91 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU8P0CE92 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU11P0CE93 120 aa5.26□□□□□ -1.57
PUP1YOR157C RPL42AP0CX27 106 aaKnown RBP5.26□□□□□ -1.57
PUP1YOR157C RPL42BP0CX28 106 aaKnown RBP5.26□□□□□ -1.57
PUP1YOR157C MSK1P32048 576 aa5.26□□□□□ -1.57
PUP1YOR157C PAU13P38725 120 aa5.26□□□□□ -1.57
PUP1YOR157C RPB11P38902 120 aa5.26□□□□□ -1.57
PUP1YOR157C SEC72P39742 193 aaKnown RBP5.26□□□□□ -1.57
PUP1YOR157C SRB7P47822 140 aa5.26□□□□□ -1.57
PUP1YOR157C PAU10Q03050 120 aa5.26□□□□□ -1.57
PUP1YOR157C GPI19Q04082 140 aa5.26□□□□□ -1.57
PUP1YOR157C PAU20Q08322 120 aa5.26□□□□□ -1.57
PUP1YOR157C PAU9Q3E770 120 aa5.26□□□□□ -1.57
PUP1YOR157C ECM12O13529 151 aa5.24□□□□□ -1.57
PUP1YOR157C CDC43P18898 376 aa5.24□□□□□ -1.57
PUP1YOR157C SAR1P20606 190 aaKnown RBP5.24□□□□□ -1.57
PUP1YOR157C RIB5P38145 238 aa5.24□□□□□ -1.57
PUP1YOR157C YBR085C-AO43137 85 aa5.23□□□□□ -1.57
PUP1YOR157C MOG1P47123 218 aa5.23□□□□□ -1.57
PUP1YOR157C GLO1P50107 326 aa5.23□□□□□ -1.57
PUP1YOR157C ENV10Q99382 181 aa5.23□□□□□ -1.57
PUP1YOR157C RPL27AP0C2H6 136 aaKnown RBP5.22□□□□□ -1.57
PUP1YOR157C YBR219CP38317 127 aa5.22□□□□□ -1.57
PUP1YOR157C SDH8P38345 138 aa5.22□□□□□ -1.57
PUP1YOR157C HIT1P46973 164 aa5.22□□□□□ -1.57
PUP1YOR157C THG1P53215 237 aaKnown RBP5.22□□□□□ -1.57
PUP1YOR157C COX19Q3E731 98 aa5.22□□□□□ -1.57
PUP1YOR157C CMC4Q3E7A9 73 aa5.22□□□□□ -1.57
PUP1YOR157C YCL001W-BQ96VH2 84 aa5.22□□□□□ -1.57
PUP1YOR157C ARO2P28777 376 aaKnown RBP5.21□□□□□ -1.58
PUP1YOR157C ZRT1P32804 376 aa5.21□□□□□ -1.58
PUP1YOR157C AIM29P36154 155 aa5.21□□□□□ -1.58
PUP1YOR157C SPC25P40014 221 aa5.21□□□□□ -1.58
PUP1YOR157C YLR156WP0CE96 114 aa5.19□□□□□ -1.58
PUP1YOR157C YLR159WP0CE97 114 aa5.19□□□□□ -1.58
PUP1YOR157C YLR161WP0CE98 114 aa5.19□□□□□ -1.58
PUP1YOR157C SRP14P38985 146 aa5.19□□□□□ -1.58
PUP1YOR157C VTC1P40046 129 aaRIP-Chip data5.19□□□□□ -1.58not detected
PUP1YOR157C NAT3Q06504 195 aa5.19□□□□□ -1.58
PUP1YOR157C YLR118CQ12354 227 aa5.19□□□□□ -1.58
PUP1YOR157C SRP21P32342 167 aa5.18□□□□□ -1.58
PUP1YOR157C YKL069WP36088 180 aa5.18□□□□□ -1.58
PUP1YOR157C GIM5Q04493 163 aa5.18□□□□□ -1.58
PUP1YOR157C ARC18Q05933 178 aaKnown RBP5.18□□□□□ -1.58
PUP1YOR157C YGL041C-BQ3E750 60 aa5.18□□□□□ -1.58
PUP1YOR157C CWP2P43497 92 aa5.17□□□□□ -1.58
PUP1YOR157C YGR149WP48236 432 aa5.17□□□□□ -1.58
PUP1YOR157C JAC1P53193 184 aa5.17□□□□□ -1.58
PUP1YOR157C GTO3Q04806 366 aa5.17□□□□□ -1.58
PUP1YOR157C YLR415CO13578 112 aa5.16□□□□□ -1.58
PUP1YOR157C ADH2P00331 348 aaKnown RBP5.16□□□□□ -1.58
PUP1YOR157C QRI5P32344 111 aa5.16□□□□□ -1.58
PUP1YOR157C YMR175W-AQ3E766 64 aa5.16□□□□□ -1.58
PUP1YOR157C VMA7P39111 118 aa5.15□□□□□ -1.59
PUP1YOR157C YIL024CP40543 189 aa5.15□□□□□ -1.59
PUP1YOR157C SMT3Q12306 101 aaKnown RBP5.15□□□□□ -1.59
PUP1YOR157C UBC4P15731 148 aa5.14□□□□□ -1.59
PUP1YOR157C YKR032WP36127 104 aa5.14□□□□□ -1.59
PUP1YOR157C YCL021W-AQ96VH3 125 aa5.14□□□□□ -1.59
PUP1YOR157C YEL008WP40001 126 aa5.13□□□□□ -1.59
PUP1YOR157C KTI11Q3E840 82 aa5.13□□□□□ -1.59
PUP1YOR157C YJR146WP47174 117 aa5.12□□□□□ -1.59
PUP1YOR157C PHO23P50947 330 aa5.12□□□□□ -1.59
PUP1YOR157C DAD3P69850 94 aa5.12□□□□□ -1.59
PUP1YOR157C YKR070WP36151 352 aaKnown RBP5.11□□□□□ -1.59
PUP1YOR157C YMR295CQ03559 197 aa5.11□□□□□ -1.59
PUP1YOR157C YOR268CQ08734 132 aa5.11□□□□□ -1.59
PUP1YOR157C PAU7P39545 55 aa5.1□□□□□ -1.59
PUP1YOR157C PAU5P43575 122 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms