RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C SEC11P15367 167 aa2.17□□□□□ -2.06
HRD1YOL013C KNH1P50112 268 aa2.17□□□□□ -2.06
HRD1YOL013C DAD3P69850 94 aa2.17□□□□□ -2.06
HRD1YOL013C YHP1Q04116 353 aa2.17□□□□□ -2.06
HRD1YOL013C CUE4Q04201 117 aaPredicted RBP2.17□□□□□ -2.06
HRD1YOL013C SOM1Q05676 74 aa2.17□□□□□ -2.06
HRD1YOL013C FIT2Q08906 153 aa2.17□□□□□ -2.06
HRD1YOL013C UTR5P32630 166 aa2.16□□□□□ -2.06
HRD1YOL013C HYR1P40581 163 aaKnown RBP2.16□□□□□ -2.06
HRD1YOL013C LAA1P39526 2014 aa2.16□□□□□ -2.06
HRD1YOL013C FAS1P07149 2051 aaKnown RBP2.16□□□□□ -2.06
HRD1YOL013C YBR209WP38311 105 aa2.15□□□□□ -2.06
HRD1YOL013C LSM8P47093 109 aaKnown RBP2.15□□□□□ -2.06
HRD1YOL013C ERG25P53045 309 aa2.15□□□□□ -2.06
HRD1YOL013C POP3P53833 195 aaPredicted RBP2.15□□□□□ -2.06
HRD1YOL013C YCL001W-BQ96VH2 84 aa2.15□□□□□ -2.06
HRD1YOL013C VPS13Q07878 3144 aa2.15□□□□□ -2.06
HRD1YOL013C QCR10P37299 77 aa2.15□□□□□ -2.07
HRD1YOL013C PAM16P42949 149 aa2.15□□□□□ -2.07
HRD1YOL013C DIE2P50076 525 aa2.15□□□□□ -2.07
HRD1YOL013C CYT2Q00873 224 aa2.15□□□□□ -2.07
HRD1YOL013C RCE1Q03530 315 aa2.15□□□□□ -2.07
HRD1YOL013C ELP6Q04868 273 aa2.15□□□□□ -2.07
HRD1YOL013C FYV5P25585 152 aa2.14□□□□□ -2.07
HRD1YOL013C YHR022CP38763 256 aa2.14□□□□□ -2.07
HRD1YOL013C CCS1P40202 249 aaKnown RBP2.14□□□□□ -2.07
HRD1YOL013C YGR269WP40326 108 aa2.14□□□□□ -2.07
HRD1YOL013C YFR035CP43608 114 aa2.14□□□□□ -2.07
HRD1YOL013C YCL001W-AP87012 153 aa2.14□□□□□ -2.07
HRD1YOL013C YML079WQ03629 201 aa2.14□□□□□ -2.07
HRD1YOL013C ZEO1Q08245 113 aa2.14□□□□□ -2.07
HRD1YOL013C RIF1P29539 1916 aa2.14□□□□□ -2.07
HRD1YOL013C UBC5P15732 148 aa2.13□□□□□ -2.07
HRD1YOL013C CLB6P32943 380 aa2.13□□□□□ -2.07
HRD1YOL013C DAD4P69851 72 aa2.13□□□□□ -2.07
HRD1YOL013C KEI1Q06346 221 aa2.13□□□□□ -2.07
HRD1YOL013C YPR174CQ06616 221 aaPredicted RBP2.13□□□□□ -2.07
HRD1YOL013C GTT2Q12390 233 aa2.13□□□□□ -2.07
HRD1YOL013C CMC4Q3E7A9 73 aa2.13□□□□□ -2.07
HRD1YOL013C HAP3P13434 144 aa2.12□□□□□ -2.07
HRD1YOL013C YKR045CP36138 183 aa2.12□□□□□ -2.07
HRD1YOL013C YBR090CP38253 122 aa2.12□□□□□ -2.07
HRD1YOL013C YJL144WP47009 104 aa2.12□□□□□ -2.07
HRD1YOL013C GRX5Q02784 150 aa2.12□□□□□ -2.07
HRD1YOL013C YMR321CQ04898 105 aa2.12□□□□□ -2.07
HRD1YOL013C STF2P16965 84 aa2.12□□□□□ -2.07
HRD1YOL013C SVP26P38869 228 aa2.12□□□□□ -2.07
HRD1YOL013C GNA1P43577 159 aaPredicted RBP2.12□□□□□ -2.07
HRD1YOL013C AVO2Q04749 426 aa2.12□□□□□ -2.07
HRD1YOL013C NMA1Q06178 401 aaKnown RBP2.12□□□□□ -2.07
HRD1YOL013C RTR2Q12378 196 aa2.12□□□□□ -2.07
HRD1YOL013C YCR099CP25657 155 aa2.11□□□□□ -2.07
HRD1YOL013C TMA19P35691 167 aaKnown RBP2.11□□□□□ -2.07
HRD1YOL013C YKL044WP36092 106 aa2.11□□□□□ -2.07
HRD1YOL013C YEA6P39953 335 aa2.11□□□□□ -2.07
HRD1YOL013C ATP19P81451 68 aa2.11□□□□□ -2.07
HRD1YOL013C YDL157CQ12082 118 aa2.11□□□□□ -2.07
HRD1YOL013C UBR2Q07963 1872 aa2.11□□□□□ -2.07
HRD1YOL013C FMT1P32785 401 aa2.1□□□□□ -2.07
HRD1YOL013C EMP24P32803 203 aaKnown RBP2.1□□□□□ -2.07
HRD1YOL013C YMR103CQ04436 120 aa2.1□□□□□ -2.07
HRD1YOL013C RAF1Q06891 181 aa2.1□□□□□ -2.07
HRD1YOL013C YGL041W-AP0C5N3 154 aa2.09□□□□□ -2.07
HRD1YOL013C HSP150P32478 413 aa2.09□□□□□ -2.07
HRD1YOL013C SNF11P38956 169 aa2.09□□□□□ -2.07
HRD1YOL013C YAE1P47118 141 aaPredicted RBP2.09□□□□□ -2.07
HRD1YOL013C MIX17Q03667 156 aa2.09□□□□□ -2.07
HRD1YOL013C SML1Q04964 104 aa2.09□□□□□ -2.07
HRD1YOL013C YPR153WQ06537 140 aa2.09□□□□□ -2.07
HRD1YOL013C EMC6Q12431 108 aa2.09□□□□□ -2.07
HRD1YOL013C RPL13AQ12690 199 aaPredicted RBP2.09□□□□□ -2.07
HRD1YOL013C MED11Q99278 115 aa2.09□□□□□ -2.07
HRD1YOL013C FPR1P20081 114 aaKnown RBP2.09□□□□□ -2.08
HRD1YOL013C HPA3P39979 161 aa2.09□□□□□ -2.08
HRD1YOL013C YGR164WP53291 111 aa2.09□□□□□ -2.08
HRD1YOL013C MDM35O60200 86 aa2.08□□□□□ -2.08
HRD1YOL013C SEC59P20048 519 aa2.08□□□□□ -2.08
HRD1YOL013C SPO73P40031 143 aa2.08□□□□□ -2.08
HRD1YOL013C ERV14P53173 138 aa2.08□□□□□ -2.08
HRD1YOL013C GPI19Q04082 140 aa2.08□□□□□ -2.08
HRD1YOL013C YKL068W-AQ3E826 78 aa2.08□□□□□ -2.08
HRD1YOL013C RPL40AP0CH08 128 aaKnown RBP2.07□□□□□ -2.08
HRD1YOL013C RPL40BP0CH09 128 aaKnown RBP2.07□□□□□ -2.08
HRD1YOL013C HYP2P23301 157 aaKnown RBP2.07□□□□□ -2.08
HRD1YOL013C IPT1P38954 527 aa2.07□□□□□ -2.08
HRD1YOL013C DCV1P43595 202 aa2.07□□□□□ -2.08
HRD1YOL013C MPC1P53157 130 aaKnown RBP2.07□□□□□ -2.08
HRD1YOL013C BRP1P53194 125 aa2.07□□□□□ -2.08
HRD1YOL013C RPS25BP0C0T4 108 aaKnown RBP2.06□□□□□ -2.08
HRD1YOL013C YEL014CP39999 101 aa2.06□□□□□ -2.08
HRD1YOL013C YMR030W-AQ3E760 96 aa2.06□□□□□ -2.08
HRD1YOL013C RPS25AQ3E792 108 aaPredicted RBP2.06□□□□□ -2.08
HRD1YOL013C PAU21P0CE86 164 aa2.06□□□□□ -2.08
HRD1YOL013C PAU22P0CE87 164 aa2.06□□□□□ -2.08
HRD1YOL013C MRPL44P19956 98 aa2.06□□□□□ -2.08
HRD1YOL013C AIM18P38884 321 aa2.06□□□□□ -2.08
HRD1YOL013C TDA2P40045 126 aa2.06□□□□□ -2.08
HRD1YOL013C YFL051CP43552 160 aa2.06□□□□□ -2.08
HRD1YOL013C DAN1P47178 298 aa2.06□□□□□ -2.08
HRD1YOL013C RTC6O14464 93 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms