RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	FMP46	P36141	133 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	ANS1	P38832	159 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	MTC6	P38849	526 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	YJL218W	P40892	196 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	OST2	P46964	130 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	SCW4	P53334	386 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	CUE4	Q04201	117 aa	Predicted RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	ARC18	Q05933	178 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	KEI1	Q06346	221 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	ANT1	Q06497	328 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	GAT3	Q07928	141 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	YOR385W	Q08909	290 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	DFM1	Q12743	341 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	SUS1	Q6WNK7	96 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	ATP5	P09457	212 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	RPS22A	P0C0W1	130 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	MRPL38	P35996	138 aa	Predicted RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	ECM33	P38248	429 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	YHL018W	P38744	120 aa	Predicted RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	ASP1	P38986	381 aa	Predicted RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	PRE5	P40302	234 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	FLX1	P40464	311 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	TES1	P41903	349 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	YMR103C	Q04436	120 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	MSA1	Q08471	629 aa		1.22	□□□□□ -2.21
SSK2	YNR031C	RPS22B	Q3E7Y3	130 aa	Known RBP	1.22	□□□□□ -2.21
SSK2	YNR031C	YGL010W	P25338	174 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	ATS1	P31386	333 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	QRI5	P32344	111 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YBR292C	P38357	123 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	POR2	P40478	281 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	PAM16	P42949	149 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	SMD3	P43321	101 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	GON7	P46984	123 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	HAL1	Q01766	294 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YMR082C	Q04276	118 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YLR146W-A	Q2V2P1	62 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	MBF1	O14467	151 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	PAI3	P01094	68 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	DDR48	P18899	430 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	PAM17	P36147	197 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	GLE2	P40066	365 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	POP3	P53833	195 aa	Predicted RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	LCL1	Q02786	101 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	COF1	Q03048	143 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	FIT1	Q04433	528 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	AYT1	Q12226	474 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	FMP49	A0A023PZB3	126 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	COX7	P10174	60 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	ROX3	P25046	220 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	TRX3	P25372	127 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	NHP2	P32495	156 aa	Predicted RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	UTR5	P32630	166 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	SWD2	P36104	329 aa	Predicted RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	YNL200C	P40165	246 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	MPM1	P40364	252 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	FIP1	P45976	327 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	SPR6	Q01684	191 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YDR042C	Q03205	200 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	HOR7	Q05827	59 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	SYM1	Q06563	197 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	HPA2	Q06592	156 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YOR268C	Q08734	132 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YMR030W-A	Q3E760	96 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YMR105W-A	Q8TGS8	64 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YLR302C	O13544	120 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	ERG24	P32462	438 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	YBR090C	P38253	122 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	YHR140W	P38842	239 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	NCA3	P46955	337 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	ADD37	Q03233	198 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	UTP15	Q04305	513 aa	Known RBP	1.21	□□□□□ -2.22
SSK2	YNR031C	ASM4	Q05166	528 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	FIT3	Q08907	204 aa		1.21	□□□□□ -2.22
SSK2	YNR031C	RPB11	P38902	120 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YFR054C	P43622	192 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YJL028W	P47062	111 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YTH1	Q06102	208 aa	Predicted RBP	1.2	□□□□□ -2.22
SSK2	YNR031C	YAL063C-A	Q3E791	96 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	RPL28	P02406	149 aa	Known RBP	1.2	□□□□□ -2.22
SSK2	YNR031C	YEL045C	P32616	141 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	TIM12	P32830	109 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	VMA11	P32842	164 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	RPS27A	P35997	82 aa	Known RBP	1.2	□□□□□ -2.22
SSK2	YNR031C	RPS27B	P38711	82 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YIR020C	P40575	100 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	DCV1	P43595	202 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YJL144W	P47009	104 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YNL033W	P53964	284 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YDL242W	Q07746	117 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	MIM1	Q08176	113 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	TMC1	Q08422	150 aa	Predicted RBP	1.2	□□□□□ -2.22
SSK2	YNR031C	MPD1	Q12404	318 aa	Known RBP	1.2	□□□□□ -2.22
SSK2	YNR031C	Q0032	Q9ZZX7	96 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YAR023C	D6VPM8	179 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YPL073C	P40323	161 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	SBH1	P52870	82 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	ATP23	P53722	227 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	AIM11	P87275	137 aa		1.2	□□□□□ -2.22
SSK2	YNR031C	YOL160W	Q08321	113 aa		1.2	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms