RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W KTI11Q3E840 82 aa5.21□□□□□ -1.57
HDA1YNL021W EMP24P32803 203 aaKnown RBP5.21□□□□□ -1.58
HDA1YNL021W VTC1P40046 129 aaRIP-Chip data5.21□□□□□ -1.58not detected
HDA1YNL021W YML100W-AQ8TGT0 57 aa5.21□□□□□ -1.58
HDA1YNL021W URA5P13298 226 aaKnown RBP5.2□□□□□ -1.58
HDA1YNL021W CLB6P32943 380 aa5.2□□□□□ -1.58
HDA1YNL021W RPB7P34087 171 aa5.2□□□□□ -1.58
HDA1YNL021W GCV3P39726 170 aaPredicted RBP5.2□□□□□ -1.58
HDA1YNL021W GPI2P46961 280 aa5.2□□□□□ -1.58
HDA1YNL021W SIP18P50263 79 aa5.2□□□□□ -1.58
HDA1YNL021W ATG40Q99325 256 aa5.2□□□□□ -1.58
HDA1YNL021W YBR090CP38253 122 aa5.2□□□□□ -1.58
HDA1YNL021W NSE4P43124 402 aa5.2□□□□□ -1.58
HDA1YNL021W RRT7Q07829 113 aa5.2□□□□□ -1.58
HDA1YNL021W YLR146W-AQ2V2P1 62 aa5.2□□□□□ -1.58
HDA1YNL021W RPL14AP36105 138 aaKnown RBP5.19□□□□□ -1.58
HDA1YNL021W RPL14BP38754 138 aaKnown RBP5.19□□□□□ -1.58
HDA1YNL021W YER181CP40097 107 aa5.19□□□□□ -1.58
HDA1YNL021W SBH1P52870 82 aa5.19□□□□□ -1.58
HDA1YNL021W YGL260WP53056 76 aa5.19□□□□□ -1.58
HDA1YNL021W UPS1Q05776 175 aa5.19□□□□□ -1.58
HDA1YNL021W YPR108W-AQ3E7B3 70 aa5.19□□□□□ -1.58
HDA1YNL021W FYV4P38783 130 aaPredicted RBP5.18□□□□□ -1.58
HDA1YNL021W ELC1Q03071 99 aa5.18□□□□□ -1.58
HDA1YNL021W YHR125WP38831 101 aa5.18□□□□□ -1.58
HDA1YNL021W SNU13P39990 126 aaKnown RBP5.18□□□□□ -1.58
HDA1YNL021W GTT1P40582 234 aa5.18□□□□□ -1.58
HDA1YNL021W YLR412C-AQ3E742 68 aa5.18□□□□□ -1.58
HDA1YNL021W ERV15P38312 142 aa5.17□□□□□ -1.58
HDA1YNL021W RPB11P38902 120 aa5.17□□□□□ -1.58
HDA1YNL021W YPL067CQ02754 198 aa5.17□□□□□ -1.58
HDA1YNL021W EST3Q03096 181 aa5.17□□□□□ -1.58
HDA1YNL021W YRA2P36036 203 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
HDA1YNL021W YHL037CP38733 133 aa5.17□□□□□ -1.58
HDA1YNL021W GON7P46984 123 aa5.17□□□□□ -1.58
HDA1YNL021W FIT1Q04433 528 aa5.17□□□□□ -1.58
HDA1YNL021W ATP5P09457 212 aa5.16□□□□□ -1.58
HDA1YNL021W HYP2P23301 157 aaKnown RBP5.16□□□□□ -1.58
HDA1YNL021W YPI1P43587 155 aa5.16□□□□□ -1.58
HDA1YNL021W SCW10Q04951 389 aa5.16□□□□□ -1.58
HDA1YNL021W HUG1Q6Q5K6 68 aa5.16□□□□□ -1.58
HDA1YNL021W UBC5P15732 148 aa5.15□□□□□ -1.58
HDA1YNL021W EMC5P40540 141 aa5.15□□□□□ -1.58
HDA1YNL021W YOR268CQ08734 132 aa5.15□□□□□ -1.58
HDA1YNL021W YOR192C-CQ3E736 78 aa5.15□□□□□ -1.58
HDA1YNL021W YFR045WP43617 309 aa5.15□□□□□ -1.59
HDA1YNL021W YCL001W-AP87012 153 aa5.15□□□□□ -1.59
HDA1YNL021W FYV12Q08559 129 aa5.15□□□□□ -1.59
HDA1YNL021W SRB6P32570 121 aa5.14□□□□□ -1.59
HDA1YNL021W RIM9Q04734 239 aa5.14□□□□□ -1.59
HDA1YNL021W YHR213W-AQ8TGT4 77 aa5.14□□□□□ -1.59
HDA1YNL021W YHR130CP38834 111 aa5.14□□□□□ -1.59
HDA1YNL021W YFL051CP43552 160 aa5.14□□□□□ -1.59
HDA1YNL021W SNN1P48232 102 aa5.14□□□□□ -1.59
HDA1YNL021W YOL118CQ08259 102 aa5.14□□□□□ -1.59
HDA1YNL021W YDR274CP87283 123 aa5.13□□□□□ -1.59
HDA1YNL021W YAR023CD6VPM8 179 aa5.12□□□□□ -1.59
HDA1YNL021W ADH3P07246 375 aaKnown RBP5.12□□□□□ -1.59
HDA1YNL021W RPS23AP0CX29 145 aaKnown RBP5.12□□□□□ -1.59
HDA1YNL021W RPS23BP0CX30 145 aa5.12□□□□□ -1.59
HDA1YNL021W SPC25P40014 221 aa5.12□□□□□ -1.59
HDA1YNL021W ARC15P40518 154 aaRIP-Chip data5.12□□□□□ -1.59not detected
HDA1YNL021W YMR082CQ04276 118 aa5.12□□□□□ -1.59
HDA1YNL021W YMR090WQ04304 227 aaKnown RBP5.12□□□□□ -1.59
HDA1YNL021W VMA9Q3E7B6 73 aa5.12□□□□□ -1.59
HDA1YNL021W SDH4P37298 181 aa5.11□□□□□ -1.59
HDA1YNL021W YHR032W-AP0C5N6 59 aa5.11□□□□□ -1.59
HDA1YNL021W SCM4P32564 187 aa5.11□□□□□ -1.59
HDA1YNL021W VMA11P32842 164 aa5.11□□□□□ -1.59
HDA1YNL021W ERG25P53045 309 aa5.11□□□□□ -1.59
HDA1YNL021W COA2Q3E823 68 aa5.11□□□□□ -1.59
HDA1YNL021W ROX3P25046 220 aa5.1□□□□□ -1.59
HDA1YNL021W YBR292CP38357 123 aa5.1□□□□□ -1.59
HDA1YNL021W YER134CP40081 178 aa5.1□□□□□ -1.59
HDA1YNL021W YER188WP40103 239 aa5.1□□□□□ -1.59
HDA1YNL021W GEP7P53171 287 aa5.1□□□□□ -1.59
HDA1YNL021W MRS4P23500 304 aa5.09□□□□□ -1.59
HDA1YNL021W AHT1P29589 182 aa5.09□□□□□ -1.59
HDA1YNL021W YHR138CP38841 114 aaPredicted RBP5.09□□□□□ -1.59
HDA1YNL021W YAR029WP39549 74 aa5.09□□□□□ -1.59
HDA1YNL021W SED1Q01589 338 aa5.09□□□□□ -1.59
HDA1YNL021W COX19Q3E731 98 aa5.09□□□□□ -1.59
HDA1YNL021W YGL193CP53097 103 aa5.09□□□□□ -1.59
HDA1YNL021W RPL39P04650 51 aa5.08□□□□□ -1.6
HDA1YNL021W YDR114CQ04597 100 aa5.08□□□□□ -1.6
HDA1YNL021W PCC1Q3E833 88 aa5.08□□□□□ -1.6
HDA1YNL021W IRA2P19158 3079 aa5.08□□□□□ -1.6
HDA1YNL021W YBR056W-AI2HB52 66 aa5.08□□□□□ -1.6
HDA1YNL021W MID2P36027 376 aa5.08□□□□□ -1.6
HDA1YNL021W MPC3P53311 146 aa5.08□□□□□ -1.6
HDA1YNL021W PIR5P46999 287 aa5.07□□□□□ -1.6
HDA1YNL021W RAD28Q12021 506 aa5.07□□□□□ -1.6
HDA1YNL021W YMR105W-AQ8TGS8 64 aa5.07□□□□□ -1.6
HDA1YNL021W PHS1P40857 217 aa5.06□□□□□ -1.6
HDA1YNL021W YMR103CQ04436 120 aa5.06□□□□□ -1.6
HDA1YNL021W YOR015WQ12169 119 aa5.06□□□□□ -1.6
HDA1YNL021W MRPL44P19956 98 aa5.06□□□□□ -1.6
HDA1YNL021W HSP12P22943 109 aaKnown RBP5.06□□□□□ -1.6
HDA1YNL021W YIL059CP40520 121 aa5.06□□□□□ -1.6
HDA1YNL021W GAT4P40569 121 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms