RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W SAS5Q99314 248 aa2.88□□□□□ -1.95
PUB1YNL016W MID2P36027 376 aa2.87□□□□□ -1.95
PUB1YNL016W RRT1P38192 103 aa2.87□□□□□ -1.95
PUB1YNL016W YER135CP40082 130 aa2.87□□□□□ -1.95
PUB1YNL016W PHS1P40857 217 aa2.87□□□□□ -1.95
PUB1YNL016W YNR064CP53750 290 aa2.87□□□□□ -1.95
PUB1YNL016W DAD3P69850 94 aa2.87□□□□□ -1.95
PUB1YNL016W RIM9Q04734 239 aa2.87□□□□□ -1.95
PUB1YNL016W IRC19Q07843 230 aa2.87□□□□□ -1.95
PUB1YNL016W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
PUB1YNL016W YKL018C-AQ3E7A7 99 aa2.87□□□□□ -1.95
PUB1YNL016W MSW1P04803 379 aa2.87□□□□□ -1.95
PUB1YNL016W MRS4P23500 304 aa2.87□□□□□ -1.95
PUB1YNL016W DOC1P53068 250 aa2.87□□□□□ -1.95
PUB1YNL016W YMR295CQ03559 197 aa2.87□□□□□ -1.95
PUB1YNL016W SHH3Q04487 196 aa2.87□□□□□ -1.95
PUB1YNL016W CSI2Q08054 341 aa2.87□□□□□ -1.95
PUB1YNL016W YOL131WQ08270 108 aa2.87□□□□□ -1.95
PUB1YNL016W KTI11Q3E840 82 aa2.87□□□□□ -1.95
PUB1YNL016W NOP1P15646 327 aaKnown RBP2.86□□□□□ -1.95
PUB1YNL016W MPM1P40364 252 aa2.86□□□□□ -1.95
PUB1YNL016W HAL1Q01766 294 aa2.86□□□□□ -1.95
PUB1YNL016W YPR063CQ12160 140 aa2.86□□□□□ -1.95
PUB1YNL016W YOR381W-AQ3E804 55 aa2.86□□□□□ -1.95
PUB1YNL016W RPS23AP0CX29 145 aaKnown RBP2.85□□□□□ -1.95
PUB1YNL016W RPS23BP0CX30 145 aa2.85□□□□□ -1.95
PUB1YNL016W YCR050CP25630 102 aa2.85□□□□□ -1.95
PUB1YNL016W CLB6P32943 380 aa2.85□□□□□ -1.95
PUB1YNL016W YGL230CP53074 147 aa2.85□□□□□ -1.95
PUB1YNL016W LIP1Q03579 150 aa2.85□□□□□ -1.95
PUB1YNL016W RRT7Q07829 113 aa2.85□□□□□ -1.95
PUB1YNL016W FIT3Q08907 204 aa2.85□□□□□ -1.95
PUB1YNL016W YOR343CQ12484 108 aa2.85□□□□□ -1.95
PUB1YNL016W YOL162WP0CF19 215 aa2.84□□□□□ -1.96
PUB1YNL016W YKR032WP36127 104 aa2.84□□□□□ -1.96
PUB1YNL016W PAM17P36147 197 aa2.84□□□□□ -1.96
PUB1YNL016W YBR032WP38223 100 aa2.84□□□□□ -1.96
PUB1YNL016W YNL217WP40152 326 aa2.84□□□□□ -1.96
PUB1YNL016W YAE1P47118 141 aaPredicted RBP2.84□□□□□ -1.96
PUB1YNL016W UIP4Q08926 304 aa2.84□□□□□ -1.96
PUB1YNL016W YCL048W-AQ2V2Q2 79 aa2.84□□□□□ -1.96
PUB1YNL016W FZF1P32805 299 aa2.83□□□□□ -1.96
PUB1YNL016W SFT2P38166 215 aa2.83□□□□□ -1.96
PUB1YNL016W YAR029WP39549 74 aa2.83□□□□□ -1.96
PUB1YNL016W GAT4P40569 121 aa2.83□□□□□ -1.96
PUB1YNL016W SPG1P50088 95 aa2.83□□□□□ -1.96
PUB1YNL016W YMR252CQ04814 134 aa2.83□□□□□ -1.96
PUB1YNL016W SCS22Q6Q595 175 aa2.83□□□□□ -1.96
PUB1YNL016W TIM12P32830 109 aa2.82□□□□□ -1.96
PUB1YNL016W YAL064WP39711 94 aa2.82□□□□□ -1.96
PUB1YNL016W RIO2P40160 425 aaKnown RBP2.82□□□□□ -1.96
PUB1YNL016W DIE2P50076 525 aa2.82□□□□□ -1.96
PUB1YNL016W ATG40Q99325 256 aa2.82□□□□□ -1.96
PUB1YNL016W SDH4P37298 181 aa2.81□□□□□ -1.96
PUB1YNL016W FLX1P40464 311 aa2.81□□□□□ -1.96
PUB1YNL016W LSM8P47093 109 aaKnown RBP2.81□□□□□ -1.96
PUB1YNL016W SAY1P53324 424 aa2.81□□□□□ -1.96
PUB1YNL016W IRC23Q08416 157 aa2.81□□□□□ -1.96
PUB1YNL016W YOR376W-AQ3E805 51 aa2.81□□□□□ -1.96
PUB1YNL016W YGR035W-AQ45U48 73 aa2.81□□□□□ -1.96
PUB1YNL016W MIG1P27705 504 aa2.8□□□□□ -1.96
PUB1YNL016W SCM4P32564 187 aa2.8□□□□□ -1.96
PUB1YNL016W YHL042WP38729 150 aa2.8□□□□□ -1.96
PUB1YNL016W PAM16P42949 149 aa2.8□□□□□ -1.96
PUB1YNL016W BAT2P47176 376 aaKnown RBP2.8□□□□□ -1.96
PUB1YNL016W MPC1P53157 130 aaKnown RBP2.8□□□□□ -1.96
PUB1YNL016W YNR077CP53758 84 aa2.8□□□□□ -1.96
PUB1YNL016W YOR015WQ12169 119 aa2.8□□□□□ -1.96
PUB1YNL016W RPL39P04650 51 aa2.79□□□□□ -1.96
PUB1YNL016W INO4P13902 151 aa2.79□□□□□ -1.96
PUB1YNL016W SEC59P20048 519 aa2.79□□□□□ -1.96
PUB1YNL016W NSE4P43124 402 aa2.79□□□□□ -1.96
PUB1YNL016W GNA1P43577 159 aaPredicted RBP2.79□□□□□ -1.96
PUB1YNL016W PIR5P46999 287 aa2.79□□□□□ -1.96
PUB1YNL016W GRX5Q02784 150 aa2.79□□□□□ -1.96
PUB1YNL016W DML1Q03652 475 aa2.79□□□□□ -1.96
PUB1YNL016W HRT1Q08273 121 aa2.79□□□□□ -1.96
PUB1YNL016W HYP2P23301 157 aaKnown RBP2.78□□□□□ -1.96
PUB1YNL016W YEL045CP32616 141 aa2.78□□□□□ -1.96
PUB1YNL016W TMA19P35691 167 aaKnown RBP2.78□□□□□ -1.96
PUB1YNL016W YBR090CP38253 122 aa2.78□□□□□ -1.96
PUB1YNL016W YIR035CP40579 254 aa2.78□□□□□ -1.96
PUB1YNL016W RPL33BP41056 107 aaKnown RBP2.78□□□□□ -1.96
PUB1YNL016W THG1P53215 237 aaKnown RBP2.78□□□□□ -1.96
PUB1YNL016W YKL068W-AQ3E826 78 aa2.78□□□□□ -1.96
PUB1YNL016W SRL3P36167 246 aa2.77□□□□□ -1.97
PUB1YNL016W YBR242WP38331 238 aa2.77□□□□□ -1.97
PUB1YNL016W ATP19P81451 68 aa2.77□□□□□ -1.97
PUB1YNL016W YLR236CA0A023PZG4 107 aa2.76□□□□□ -1.97
PUB1YNL016W YEA6P39953 335 aa2.76□□□□□ -1.97
PUB1YNL016W UPS1Q05776 175 aa2.76□□□□□ -1.97
PUB1YNL016W YOR385WQ08909 290 aa2.76□□□□□ -1.97
PUB1YNL016W RPL26AP05743 127 aaKnown RBP2.75□□□□□ -1.97
PUB1YNL016W MRPS9P38120 278 aa2.75□□□□□ -1.97
PUB1YNL016W RPL26BP53221 127 aaKnown RBP2.75□□□□□ -1.97
PUB1YNL016W YCL001W-AP87012 153 aa2.75□□□□□ -1.97
PUB1YNL016W YMR103CQ04436 120 aa2.75□□□□□ -1.97
PUB1YNL016W YDL241WQ07738 123 aa2.75□□□□□ -1.97
PUB1YNL016W UBC5P15732 148 aa2.74□□□□□ -1.97
PUB1YNL016W TDA2P40045 126 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms