RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RSF2P46974 1380 aa3.31□□□□□ -1.88
ROT1YMR200W MAK31P23059 88 aa3.31□□□□□ -1.88
ROT1YMR200W EMP24P32803 203 aaKnown RBP3.31□□□□□ -1.88
ROT1YMR200W TDA2P40045 126 aa3.31□□□□□ -1.88
ROT1YMR200W ERV14P53173 138 aa3.31□□□□□ -1.88
ROT1YMR200W YCL001W-AP87012 153 aa3.31□□□□□ -1.88
ROT1YMR200W DOP1Q03921 1698 aa3.3□□□□□ -1.88
ROT1YMR200W ARO1P08566 1588 aaKnown RBP3.3□□□□□ -1.88
ROT1YMR200W YHR130CP38834 111 aa3.3□□□□□ -1.88
ROT1YMR200W SNU13P39990 126 aaKnown RBP3.3□□□□□ -1.88
ROT1YMR200W YDL157CQ12082 118 aa3.3□□□□□ -1.88
ROT1YMR200W YLR365WQ7LIF2 110 aa3.3□□□□□ -1.88
ROT1YMR200W LYS2P07702 1392 aa3.29□□□□□ -1.88
ROT1YMR200W COX8P04039 78 aa3.29□□□□□ -1.88
ROT1YMR200W SEC11P15367 167 aa3.29□□□□□ -1.88
ROT1YMR200W UBC4P15731 148 aa3.29□□□□□ -1.88
ROT1YMR200W ECM31P38122 312 aa3.29□□□□□ -1.88
ROT1YMR200W YHL018WP38744 120 aaPredicted RBP3.29□□□□□ -1.88
ROT1YMR200W GPI19Q04082 140 aa3.29□□□□□ -1.88
ROT1YMR200W TY3B-IQ7LHG5 1498 aaKnown RBP3.28□□□□□ -1.88
ROT1YMR200W KRE1P17260 313 aa3.28□□□□□ -1.88
ROT1YMR200W PHO88P38264 188 aaPredicted RBP3.28□□□□□ -1.88
ROT1YMR200W YPR153WQ06537 140 aa3.28□□□□□ -1.88
ROT1YMR200W RDS3Q06835 107 aaPredicted RBP3.28□□□□□ -1.88
ROT1YMR200W KSH1Q8TGJ3 72 aa3.28□□□□□ -1.88
ROT1YMR200W YRF1-3P0CX14 1859 aa3.27□□□□□ -1.89
ROT1YMR200W YRF1-7P0CX15 1859 aa3.27□□□□□ -1.89
ROT1YMR200W YRF1-6P53819 1859 aa3.27□□□□□ -1.89
ROT1YMR200W STF2P16965 84 aa3.27□□□□□ -1.89
ROT1YMR200W YJR146WP47174 117 aa3.27□□□□□ -1.89
ROT1YMR200W DAD4P69851 72 aa3.27□□□□□ -1.89
ROT1YMR200W SEC7P11075 2009 aaKnown RBP3.26□□□□□ -1.89
ROT1YMR200W PAU21P0CE86 164 aa3.26□□□□□ -1.89
ROT1YMR200W PAU22P0CE87 164 aa3.26□□□□□ -1.89
ROT1YMR200W YGL010WP25338 174 aa3.26□□□□□ -1.89
ROT1YMR200W FIT2Q08906 153 aa3.26□□□□□ -1.89
ROT1YMR200W YOS1Q3E834 85 aa3.26□□□□□ -1.89
ROT1YMR200W MIC10Q96VH5 97 aa3.26□□□□□ -1.89
ROT1YMR200W SRB8P25648 1427 aa3.26□□□□□ -1.89
ROT1YMR200W YOR093CQ12275 1648 aa3.26□□□□□ -1.89
ROT1YMR200W YBT1P32386 1661 aa3.25□□□□□ -1.89
ROT1YMR200W MRPL11P36521 249 aaPredicted RBP3.25□□□□□ -1.89
ROT1YMR200W SPO73P40031 143 aa3.25□□□□□ -1.89
ROT1YMR200W BRP1P53194 125 aa3.25□□□□□ -1.89
ROT1YMR200W SWC7Q06707 132 aa3.25□□□□□ -1.89
ROT1YMR200W NAT5Q08689 176 aa3.25□□□□□ -1.89
ROT1YMR200W CHC1P22137 1653 aaKnown RBP3.24□□□□□ -1.89
ROT1YMR200W MDM35O60200 86 aa3.24□□□□□ -1.89
ROT1YMR200W RPS25BP0C0T4 108 aaKnown RBP3.24□□□□□ -1.89
ROT1YMR200W SVP26P38869 228 aa3.24□□□□□ -1.89
ROT1YMR200W HSP10P38910 106 aa3.24□□□□□ -1.89
ROT1YMR200W HPA3P39979 161 aa3.24□□□□□ -1.89
ROT1YMR200W DCV1P43595 202 aa3.24□□□□□ -1.89
ROT1YMR200W POP3P53833 195 aaPredicted RBP3.24□□□□□ -1.89
ROT1YMR200W ELP6Q04868 273 aa3.24□□□□□ -1.89
ROT1YMR200W FIT3Q08907 204 aa3.24□□□□□ -1.89
ROT1YMR200W YMR030W-AQ3E760 96 aa3.24□□□□□ -1.89
ROT1YMR200W RPS25AQ3E792 108 aaPredicted RBP3.24□□□□□ -1.89
ROT1YMR200W YER187WP40102 141 aa3.23□□□□□ -1.89
ROT1YMR200W GTT1P40582 234 aa3.23□□□□□ -1.89
ROT1YMR200W HUR1P45820 110 aa3.23□□□□□ -1.89
ROT1YMR200W IGO1P53897 168 aa3.23□□□□□ -1.89
ROT1YMR200W VPS68Q12016 184 aa3.23□□□□□ -1.89
ROT1YMR200W COA6Q3E846 104 aa3.23□□□□□ -1.89
ROT1YMR200W DNF3Q12674 1656 aa3.21□□□□□ -1.9
ROT1YMR200W HAP1P0CE41 1502 aa3.21□□□□□ -1.9
ROT1YMR200W FUN14P18411 198 aa3.21□□□□□ -1.9
ROT1YMR200W UTR5P32630 166 aa3.21□□□□□ -1.9
ROT1YMR200W YHR022CP38763 256 aa3.21□□□□□ -1.9
ROT1YMR200W PEP8P40335 379 aa3.21□□□□□ -1.9
ROT1YMR200W YJL144WP47009 104 aa3.21□□□□□ -1.9
ROT1YMR200W CYT2Q00873 224 aa3.21□□□□□ -1.9
ROT1YMR200W MIX14Q04341 121 aa3.21□□□□□ -1.9
ROT1YMR200W YPL261CQ08976 102 aa3.21□□□□□ -1.9
ROT1YMR200W YDR029WQ12111 104 aa3.21□□□□□ -1.9
ROT1YMR200W RPL40AP0CH08 128 aaKnown RBP3.2□□□□□ -1.9
ROT1YMR200W RPL40BP0CH09 128 aaKnown RBP3.2□□□□□ -1.9
ROT1YMR200W AGA2P32781 87 aa3.2□□□□□ -1.9
ROT1YMR200W IPT1P38954 527 aa3.2□□□□□ -1.9
ROT1YMR200W YEL014CP39999 101 aa3.2□□□□□ -1.9
ROT1YMR200W RPL13BP40212 199 aaKnown RBP3.2□□□□□ -1.9
ROT1YMR200W YGL149WP53116 101 aa3.2□□□□□ -1.9
ROT1YMR200W MET31Q03081 177 aa3.2□□□□□ -1.9
ROT1YMR200W CMC4Q3E7A9 73 aa3.2□□□□□ -1.9
ROT1YMR200W SOD1P00445 154 aaKnown RBP3.19□□□□□ -1.9
ROT1YMR200W HSP150P32478 413 aa3.19□□□□□ -1.9
ROT1YMR200W HYR1P40581 163 aaKnown RBP3.19□□□□□ -1.9
ROT1YMR200W VMA21P41806 77 aa3.19□□□□□ -1.9
ROT1YMR200W YFL051CP43552 160 aa3.19□□□□□ -1.9
ROT1YMR200W YPL067CQ02754 198 aa3.19□□□□□ -1.9
ROT1YMR200W YMR082CQ04276 118 aa3.19□□□□□ -1.9
ROT1YMR200W DAD1Q12248 94 aa3.19□□□□□ -1.9
ROT1YMR200W HMRA1P0CY11 126 aa3.18□□□□□ -1.9
ROT1YMR200W GPI11Q06636 219 aa3.18□□□□□ -1.9
ROT1YMR200W OST5Q92316 86 aa3.18□□□□□ -1.9
ROT1YMR200W RTC6O14464 93 aa3.17□□□□□ -1.9
ROT1YMR200W EMC5P40540 141 aa3.17□□□□□ -1.9
ROT1YMR200W MSL1P40567 111 aaPredicted RBP3.17□□□□□ -1.9
ROT1YMR200W PAU12P53343 120 aa3.17□□□□□ -1.9
ROT1YMR200W AVO2Q04749 426 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms