RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RPL2BP0CX46 254 aaKnown RBP2.95□□□□□ -1.94
USA1YML029W PAU3P25610 124 aa2.95□□□□□ -1.94
USA1YML029W FZF1P32805 299 aa2.95□□□□□ -1.94
USA1YML029W MST28P39552 234 aa2.95□□□□□ -1.94
USA1YML029W YMR141CP40211 102 aa2.95□□□□□ -1.94
USA1YML029W CIN5P40917 295 aa2.95□□□□□ -1.94
USA1YML029W YFR035CP43608 114 aa2.95□□□□□ -1.94
USA1YML029W MST27P53176 234 aa2.95□□□□□ -1.94
USA1YML029W YGR025WP53216 100 aa2.95□□□□□ -1.94
USA1YML029W DAD4P69851 72 aa2.95□□□□□ -1.94
USA1YML029W COX12Q01519 83 aa2.95□□□□□ -1.94
USA1YML029W YCR075W-AQ3E830 75 aa2.95□□□□□ -1.94
USA1YML029W MDM10P18409 493 aa2.94□□□□□ -1.94
USA1YML029W YHR022CP38763 256 aa2.94□□□□□ -1.94
USA1YML029W YFR045WP43617 309 aa2.94□□□□□ -1.94
USA1YML029W YDR366CP87287 132 aa2.94□□□□□ -1.94
USA1YML029W ARL3Q02804 198 aa2.94□□□□□ -1.94
USA1YML029W DAD1Q12248 94 aa2.94□□□□□ -1.94
USA1YML029W YNR034W-AQ3E841 98 aa2.94□□□□□ -1.94
USA1YML029W MIX23P38162 196 aa2.94□□□□□ -1.94
USA1YML029W IRC22P40006 225 aa2.94□□□□□ -1.94
USA1YML029W PRE5P40302 234 aaKnown RBP2.94□□□□□ -1.94
USA1YML029W MIC26P50087 233 aa2.94□□□□□ -1.94
USA1YML029W RPL27AP0C2H6 136 aaKnown RBP2.93□□□□□ -1.94
USA1YML029W RPL27BP0C2H7 136 aaKnown RBP2.93□□□□□ -1.94
USA1YML029W CUP2P15315 225 aa2.93□□□□□ -1.94
USA1YML029W FYV7Q12247 151 aa2.93□□□□□ -1.94
USA1YML029W PRM7Q12459 698 aa2.93□□□□□ -1.94
USA1YML029W YOR011W-AQ3E807 68 aa2.93□□□□□ -1.94
USA1YML029W TAR1Q8TGM6 124 aa2.93□□□□□ -1.94
USA1YML029W MRPL31P14063 131 aaPredicted RBP2.93□□□□□ -1.94
USA1YML029W SIM1P40472 476 aa2.93□□□□□ -1.94
USA1YML029W VAM10Q08474 114 aa2.93□□□□□ -1.94
USA1YML029W POM33Q12164 279 aa2.93□□□□□ -1.94
USA1YML029W YLR361C-AQ3E795 98 aa2.93□□□□□ -1.94
USA1YML029W YOR304C-AO14468 76 aa2.92□□□□□ -1.94
USA1YML029W RPP2AP05319 106 aaKnown RBP2.92□□□□□ -1.94
USA1YML029W GSP1P32835 219 aaKnown RBP2.92□□□□□ -1.94
USA1YML029W GSP2P32836 220 aaKnown RBP2.92□□□□□ -1.94
USA1YML029W PAM17P36147 197 aa2.92□□□□□ -1.94
USA1YML029W YER135CP40082 130 aa2.92□□□□□ -1.94
USA1YML029W BRP1P53194 125 aa2.92□□□□□ -1.94
USA1YML029W YKR041WP36134 250 aa2.92□□□□□ -1.94
USA1YML029W RPB11P38902 120 aa2.92□□□□□ -1.94
USA1YML029W MIG3P39943 394 aa2.92□□□□□ -1.94
USA1YML029W KEG1P43614 200 aa2.92□□□□□ -1.94
USA1YML029W SCW10Q04951 389 aa2.92□□□□□ -1.94
USA1YML029W TIM22Q12328 207 aa2.92□□□□□ -1.94
USA1YML029W YGR240C-AQ3E786 66 aa2.92□□□□□ -1.94
USA1YML029W POR1P04840 283 aaKnown RBP2.91□□□□□ -1.94
USA1YML029W RPL32P38061 130 aaKnown RBP2.91□□□□□ -1.94
USA1YML029W PAU7P39545 55 aa2.91□□□□□ -1.94
USA1YML029W GLC8P41818 229 aa2.91□□□□□ -1.94
USA1YML029W DPP1Q05521 289 aa2.91□□□□□ -1.94
USA1YML029W RPS22BQ3E7Y3 130 aaKnown RBP2.91□□□□□ -1.94
USA1YML029W YKL183C-AQ3E765 70 aa2.91□□□□□ -1.94
USA1YML029W CYT2Q00873 224 aa2.9□□□□□ -1.94
USA1YML029W CWC27Q02770 301 aa2.9□□□□□ -1.94
USA1YML029W SGF11Q03067 99 aa2.9□□□□□ -1.94
USA1YML029W YCR024C-BQ3E7Z8 88 aa2.9□□□□□ -1.94
USA1YML029W YPR014CQ6B0W2 109 aa2.9□□□□□ -1.94
USA1YML029W MRPL28P36527 147 aa2.9□□□□□ -1.95
USA1YML029W OXA1P39952 402 aa2.9□□□□□ -1.95
USA1YML029W THG1P53215 237 aaKnown RBP2.9□□□□□ -1.95
USA1YML029W ARC18Q05933 178 aaKnown RBP2.9□□□□□ -1.95
USA1YML029W ADH2P00331 348 aaKnown RBP2.89□□□□□ -1.95
USA1YML029W YHR140WP38842 239 aa2.89□□□□□ -1.95
USA1YML029W LSM8P47093 109 aaKnown RBP2.89□□□□□ -1.95
USA1YML029W SDS23P53172 527 aa2.89□□□□□ -1.95
USA1YML029W GPI19Q04082 140 aa2.89□□□□□ -1.95
USA1YML029W YLR042CQ07990 161 aa2.89□□□□□ -1.95
USA1YML029W YOL085CQ99345 113 aa2.89□□□□□ -1.95
USA1YML029W AUA1P32450 94 aa2.89□□□□□ -1.95
USA1YML029W MED7Q08278 222 aa2.89□□□□□ -1.95
USA1YML029W FSF1Q12029 327 aaKnown RBP2.89□□□□□ -1.95
USA1YML029W DYN1P36022 4092 aa2.89□□□□□ -1.95
USA1YML029W SEC4P07560 215 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W RPL23AP0CX41 137 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W RPL23BP0CX42 137 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W AGA1P32323 725 aa2.88□□□□□ -1.95
USA1YML029W ZRT1P32804 376 aa2.88□□□□□ -1.95
USA1YML029W KTI12P34253 313 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W YGR017WP53210 297 aa2.88□□□□□ -1.95
USA1YML029W YBR200W-AQ3E755 54 aa2.88□□□□□ -1.95
USA1YML029W RPL42AP0CX27 106 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W RPL42BP0CX28 106 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W SSS1P35179 80 aa2.88□□□□□ -1.95
USA1YML029W ERI1P62651 68 aaKnown RBP2.88□□□□□ -1.95
USA1YML029W CUE4Q04201 117 aaPredicted RBP2.88□□□□□ -1.95
USA1YML029W Q0255P03881 472 aa2.87□□□□□ -1.95
USA1YML029W TEM1P38987 245 aa2.87□□□□□ -1.95
USA1YML029W AIM34Q03673 198 aa2.87□□□□□ -1.95
USA1YML029W YMR320WQ04897 101 aa2.87□□□□□ -1.95
USA1YML029W YPR010C-AA5Z2X5 72 aa2.87□□□□□ -1.95
USA1YML029W MRP49P32388 137 aa2.87□□□□□ -1.95
USA1YML029W TOA2P32774 122 aa2.87□□□□□ -1.95
USA1YML029W SPC1P46965 94 aa2.87□□□□□ -1.95
USA1YML029W YPS5P53057 165 aa2.86□□□□□ -1.95
USA1YML029W SEN15Q04675 128 aa2.86□□□□□ -1.95
USA1YML029W YKR032WP36127 104 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms