RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	NCE101	Q02820	53 aa		3.89	□□□□□ -1.79
CLF1	YLR117C	SDC1	Q03323	175 aa		3.89	□□□□□ -1.79
CLF1	YLR117C	YHP1	Q04116	353 aa		3.89	□□□□□ -1.79
CLF1	YLR117C	DAT1	P13483	248 aa	Known RBP	3.88	□□□□□ -1.79
CLF1	YLR117C	RPL30	P14120	105 aa	Known RBP	3.88	□□□□□ -1.79
CLF1	YLR117C	YNL217W	P40152	326 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
CLF1	YLR117C	OST1	P41543	476 aa	Known RBP	3.88	□□□□□ -1.79
CLF1	YLR117C	YFR054C	P43622	192 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	NCA3	P46955	337 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	MIX14	Q04341	121 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	YPL261C	Q08976	102 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	KSH1	Q8TGJ3	72 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	YKR032W	P36127	104 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	RPL32	P38061	130 aa	Known RBP	3.88	□□□□□ -1.79
CLF1	YLR117C	GLE2	P40066	365 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	YFL051C	P43552	160 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	MST27	P53176	234 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	YGR164W	P53291	111 aa		3.88	□□□□□ -1.79
CLF1	YLR117C	CDC39	P25655	2108 aa	Known RBP	3.87	□□□□□ -1.79
CLF1	YLR117C	YDL022C-A	P0C5L6	82 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	RPS8A	P0CX39	200 aa	Known RBP	3.87	□□□□□ -1.79
CLF1	YLR117C	RPS8B	P0CX40	200 aa	Known RBP	3.87	□□□□□ -1.79
CLF1	YLR117C	TOM40	P23644	387 aa	Known RBP	3.87	□□□□□ -1.79
CLF1	YLR117C	MLF3	P32047	452 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	FMP46	P36141	133 aa	Known RBP	3.87	□□□□□ -1.79
CLF1	YLR117C	YIA6	P40556	373 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	SFT1	P43682	97 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	UBC13	P52490	153 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	SHH4	Q06236	168 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	HNT3	Q08702	217 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	YDR381C-A	Q3E6R5	114 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	YMR175W-A	Q3E766	64 aa		3.87	□□□□□ -1.79
CLF1	YLR117C	YMR31	P19955	123 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	RRT13	P40042	185 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	SWS2	P53937	143 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	AQY1	P0CD91	305 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	IES6	P32617	166 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	MBB1	P39534	108 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	VTC1	P40046	129 aa	RIP-Chip data	3.86	□□□□□ -1.79	not detected
CLF1	YLR117C	YGR219W	P53307	113 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	IRC19	Q07843	230 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	IRC23	Q08416	157 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	TIM22	Q12328	207 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	YNL277W-A	Q3E7Z0	62 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	YHR214C-E	Q8TGK0	99 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	IGO2	Q9P305	131 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	VPS13	Q07878	3144 aa		3.86	□□□□□ -1.79
CLF1	YLR117C	FPR2	P32472	135 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	MGR2	Q02889	113 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	YGL258W-A	Q3E740	77 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	YPR053C	Q6Q5F3	151 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	PBI2	P0CT04	75 aa	Known RBP	3.85	□□□□□ -1.79
CLF1	YLR117C	RPL42A	P0CX27	106 aa	Known RBP	3.85	□□□□□ -1.79
CLF1	YLR117C	RPL42B	P0CX28	106 aa	Known RBP	3.85	□□□□□ -1.79
CLF1	YLR117C	FHN1	P53279	174 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	YDR102C	Q03864	110 aa		3.85	□□□□□ -1.79
CLF1	YLR117C	RPC11	Q04307	110 aa	Predicted RBP	3.85	□□□□□ -1.79
CLF1	YLR117C	RPL18A	P0CX49	186 aa	Known RBP	3.84	□□□□□ -1.79
CLF1	YLR117C	RPL18B	P0CX50	186 aa	Known RBP	3.84	□□□□□ -1.79
CLF1	YLR117C	PCL2	P25693	308 aa		3.84	□□□□□ -1.79
CLF1	YLR117C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
CLF1	YLR117C	LEE1	Q02799	301 aa	Known RBP	3.84	□□□□□ -1.79
CLF1	YLR117C	VPS68	Q12016	184 aa		3.84	□□□□□ -1.79
CLF1	YLR117C	Q0182	Q9ZZW1	134 aa		3.84	□□□□□ -1.79
CLF1	YLR117C	RPS16A	P0CX51	143 aa	Known RBP	3.83	□□□□□ -1.8
CLF1	YLR117C	RPS16B	P0CX52	143 aa	Known RBP	3.83	□□□□□ -1.8
CLF1	YLR117C	YER079W	P40052	210 aa	Known RBP	3.83	□□□□□ -1.8
CLF1	YLR117C	VHS2	P40463	436 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	SIM1	P40472	476 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	VEL1	P53058	206 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	MOT3	P54785	490 aa	Known RBP	3.83	□□□□□ -1.8
CLF1	YLR117C	DAD4	P69851	72 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	YMR254C	Q04838	102 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	YLR281C	Q05863	155 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	HMRA2	P0CY13	119 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	BET1	P22804	142 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	YAR029W	P39549	74 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	SNP1	Q00916	300 aa	Predicted RBP	3.83	□□□□□ -1.8
CLF1	YLR117C	COA3	Q3E7B2	85 aa		3.83	□□□□□ -1.8
CLF1	YLR117C	PFY1	P07274	126 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	YSY6	P38374	65 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	LYS1	P38998	373 aa	RIP-Chip data	3.82	□□□□□ -1.8	RIP-Chip
CLF1	YLR117C	YER187W	P40102	141 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	TDA7	P53882	636 aa	Predicted RBP	3.82	□□□□□ -1.8
CLF1	YLR117C	CYR1	P08678	2026 aa	Known RBP	3.82	□□□□□ -1.8
CLF1	YLR117C	TAO3	P40468	2376 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	MDM35	O60200	86 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	UBC4	P15731	148 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	YMR141C	P40211	102 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	AIM19	P40502	157 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	MMS2	P53152	137 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	ATP23	P53722	227 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	HSK3	P69852	69 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	YDR209C	Q03480	137 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	YLR194C	Q05777	254 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	GAT3	Q07928	141 aa		3.82	□□□□□ -1.8
CLF1	YLR117C	RRS1	Q08746	203 aa	Known RBP	3.82	□□□□□ -1.8
CLF1	YLR117C	AGA1	P32323	725 aa		3.81	□□□□□ -1.8
CLF1	YLR117C	RPL15B	P54780	204 aa	Predicted RBP	3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms