RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C ATG41Q12048 136 aa1.91□□□□□ -2.1
CSF1YLR087C FMP49A0A023PZB3 126 aa1.9□□□□□ -2.1
CSF1YLR087C VPS71Q03433 280 aa1.9□□□□□ -2.1
CSF1YLR087C EMC6Q12431 108 aa1.9□□□□□ -2.1
CSF1YLR087C YCR050CP25630 102 aa1.9□□□□□ -2.1
CSF1YLR087C FZF1P32805 299 aa1.9□□□□□ -2.1
CSF1YLR087C TOS8P53147 276 aa1.9□□□□□ -2.1
CSF1YLR087C YOL014WQ08110 124 aa1.9□□□□□ -2.1
CSF1YLR087C YOR314WQ12506 109 aa1.9□□□□□ -2.1
CSF1YLR087C HHF1P02309 103 aaKnown RBP1.9□□□□□ -2.1
CSF1YLR087C MTC6P38849 526 aa1.9□□□□□ -2.1
CSF1YLR087C GGC1P38988 300 aa1.9□□□□□ -2.1
CSF1YLR087C YIL029CP40538 142 aa1.9□□□□□ -2.11
CSF1YLR087C GAT4P40569 121 aa1.9□□□□□ -2.11
CSF1YLR087C YNR071CP53757 342 aa1.9□□□□□ -2.11
CSF1YLR087C NAG1Q8TGN9 163 aa1.9□□□□□ -2.11
CSF1YLR087C GPX1P36014 167 aa1.9□□□□□ -2.11
CSF1YLR087C YNL208WP40159 199 aaKnown RBP1.9□□□□□ -2.11
CSF1YLR087C CIS3P47001 227 aa1.9□□□□□ -2.11
CSF1YLR087C COA2Q3E823 68 aa1.9□□□□□ -2.11
CSF1YLR087C OM14P38325 134 aa1.9□□□□□ -2.11
CSF1YLR087C RPC11Q04307 110 aaPredicted RBP1.9□□□□□ -2.11
CSF1YLR087C CAB4P53332 305 aa1.89□□□□□ -2.11
CSF1YLR087C HST4P53688 370 aa1.89□□□□□ -2.11
CSF1YLR087C VAM10Q08474 114 aa1.89□□□□□ -2.11
CSF1YLR087C APS1P35181 156 aa1.89□□□□□ -2.11
CSF1YLR087C UTH1P36135 365 aa1.89□□□□□ -2.11
CSF1YLR087C YDR344CQ05510 147 aa1.89□□□□□ -2.11
CSF1YLR087C YLR342W-AQ3E810 57 aa1.89□□□□□ -2.11
CSF1YLR087C ERV1P27882 189 aa1.89□□□□□ -2.11
CSF1YLR087C LSM2P38203 95 aaKnown RBP1.89□□□□□ -2.11
CSF1YLR087C MIT1P40002 666 aa1.89□□□□□ -2.11
CSF1YLR087C YMR206WQ03695 313 aa1.89□□□□□ -2.11
CSF1YLR087C RPL18AP0CX49 186 aaKnown RBP1.89□□□□□ -2.11
CSF1YLR087C RPL18BP0CX50 186 aaKnown RBP1.89□□□□□ -2.11
CSF1YLR087C YJL009WP47078 108 aa1.89□□□□□ -2.11
CSF1YLR087C ALG13P53178 202 aa1.89□□□□□ -2.11
CSF1YLR087C YDL157CQ12082 118 aa1.89□□□□□ -2.11
CSF1YLR087C YDL211CQ12121 372 aa1.89□□□□□ -2.11
CSF1YLR087C CUP2P15315 225 aa1.89□□□□□ -2.11
CSF1YLR087C IMP1P28627 190 aa1.89□□□□□ -2.11
CSF1YLR087C SHE1P38200 338 aa1.89□□□□□ -2.11
CSF1YLR087C MGR2Q02889 113 aa1.89□□□□□ -2.11
CSF1YLR087C ELP6Q04868 273 aa1.89□□□□□ -2.11
CSF1YLR087C YPR010C-AA5Z2X5 72 aa1.89□□□□□ -2.11
CSF1YLR087C FYV5P25585 152 aa1.89□□□□□ -2.11
CSF1YLR087C SPR6Q01684 191 aa1.89□□□□□ -2.11
CSF1YLR087C SPG4Q04438 115 aa1.89□□□□□ -2.11
CSF1YLR087C PPT2Q12036 173 aa1.89□□□□□ -2.11
CSF1YLR087C YHR130CP38834 111 aa1.88□□□□□ -2.11
CSF1YLR087C RSM18P40033 138 aa1.88□□□□□ -2.11
CSF1YLR087C YDR215CQ12240 137 aa1.88□□□□□ -2.11
CSF1YLR087C SMT3Q12306 101 aaKnown RBP1.88□□□□□ -2.11
CSF1YLR087C ATX1P38636 73 aa1.88□□□□□ -2.11
CSF1YLR087C SRX1P36077 127 aa1.88□□□□□ -2.11
CSF1YLR087C YHR140WP38842 239 aa1.88□□□□□ -2.11
CSF1YLR087C TVP23P38962 199 aa1.88□□□□□ -2.11
CSF1YLR087C HPA3P39979 161 aa1.88□□□□□ -2.11
CSF1YLR087C SED1Q01589 338 aa1.88□□□□□ -2.11
CSF1YLR087C YMR103CQ04436 120 aa1.88□□□□□ -2.11
CSF1YLR087C YOR029WQ12243 111 aa1.88□□□□□ -2.11
CSF1YLR087C TIM22Q12328 207 aa1.88□□□□□ -2.11
CSF1YLR087C YPR015CQ12531 247 aa1.88□□□□□ -2.11
CSF1YLR087C RPL30P14120 105 aaKnown RBP1.88□□□□□ -2.11
CSF1YLR087C PIR3Q03180 325 aa1.88□□□□□ -2.11
CSF1YLR087C YDR119W-AQ2V2P9 66 aa1.88□□□□□ -2.11
CSF1YLR087C RPL11AP0C0W9 174 aaKnown RBP1.88□□□□□ -2.11
CSF1YLR087C SAP30P38429 201 aa1.88□□□□□ -2.11
CSF1YLR087C DCV1P43595 202 aa1.88□□□□□ -2.11
CSF1YLR087C RPL11BQ3E757 174 aaPredicted RBP1.88□□□□□ -2.11
CSF1YLR087C RPS14AP06367 137 aaKnown RBP1.88□□□□□ -2.11
CSF1YLR087C YDL241WQ07738 123 aa1.88□□□□□ -2.11
CSF1YLR087C TEN1Q07921 160 aa1.88□□□□□ -2.11
CSF1YLR087C YER039C-AP0CD97 72 aa1.87□□□□□ -2.11
CSF1YLR087C YCR001WP25347 104 aa1.87□□□□□ -2.11
CSF1YLR087C ERG2P32352 222 aa1.87□□□□□ -2.11
CSF1YLR087C WSC2P53832 503 aa1.87□□□□□ -2.11
CSF1YLR087C NPC2Q12408 173 aa1.87□□□□□ -2.11
CSF1YLR087C YGL194C-AQ2V2P6 80 aa1.87□□□□□ -2.11
CSF1YLR087C FMP27Q06179 2628 aa1.87□□□□□ -2.11
CSF1YLR087C SPT4P32914 102 aaPredicted RBP1.87□□□□□ -2.11
CSF1YLR087C RPS10BP46784 105 aaKnown RBP1.87□□□□□ -2.11
CSF1YLR087C YCR075W-AQ3E830 75 aa1.87□□□□□ -2.11
CSF1YLR087C TIM17P39515 158 aa1.87□□□□□ -2.11
CSF1YLR087C ERI1P62651 68 aaKnown RBP1.87□□□□□ -2.11
CSF1YLR087C TIM10P87108 93 aa1.87□□□□□ -2.11
CSF1YLR087C YPL062WQ02781 134 aa1.87□□□□□ -2.11
CSF1YLR087C VTC1P40046 129 aaRIP-Chip data1.87□□□□□ -2.11 RIP-Chip
CSF1YLR087C YGL088WP53151 121 aa1.87□□□□□ -2.11
CSF1YLR087C FCF1Q05498 189 aaPredicted RBP1.87□□□□□ -2.11
CSF1YLR087C RPL36BO14455 100 aaKnown RBP1.87□□□□□ -2.11
CSF1YLR087C RPL36AP05745 100 aaPredicted RBP1.87□□□□□ -2.11
CSF1YLR087C VMA3P25515 160 aa1.87□□□□□ -2.11
CSF1YLR087C RPL29P05747 59 aaPredicted RBP1.86□□□□□ -2.11
CSF1YLR087C LSM6Q06406 86 aaKnown RBP1.86□□□□□ -2.11
CSF1YLR087C GAT3Q07928 141 aa1.86□□□□□ -2.11
CSF1YLR087C YDL007C-AQ2V2Q0 85 aa1.86□□□□□ -2.11
CSF1YLR087C MPC3P53311 146 aa1.86□□□□□ -2.11
CSF1YLR087C DIC1Q06143 298 aa1.86□□□□□ -2.11
CSF1YLR087C YDL057WQ07379 328 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms