RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W PGD1P40356 397 aa3.74□□□□□ -1.81
TIM54YJL054W CDC40P40968 455 aaPredicted RBP3.74□□□□□ -1.81
TIM54YJL054W MOG1P47123 218 aa3.74□□□□□ -1.81
TIM54YJL054W SNN1P48232 102 aa3.74□□□□□ -1.81
TIM54YJL054W MGA1P53050 456 aa3.74□□□□□ -1.81
TIM54YJL054W DPP1Q05521 289 aa3.74□□□□□ -1.81
TIM54YJL054W SAL1D6W196 494 aa3.73□□□□□ -1.81
TIM54YJL054W UBC12P52491 188 aa3.73□□□□□ -1.81
TIM54YJL054W LCL2Q08045 131 aa3.73□□□□□ -1.81
TIM54YJL054W DGA1Q08650 418 aa3.73□□□□□ -1.81
TIM54YJL054W RPL33AP05744 107 aaKnown RBP3.72□□□□□ -1.81
TIM54YJL054W TEM1P38987 245 aa3.72□□□□□ -1.81
TIM54YJL054W PHS1P40857 217 aa3.72□□□□□ -1.81
TIM54YJL054W RPL33BP41056 107 aaKnown RBP3.72□□□□□ -1.81
TIM54YJL054W ERI1P62651 68 aaKnown RBP3.72□□□□□ -1.81
TIM54YJL054W DAD3P69850 94 aa3.72□□□□□ -1.81
TIM54YJL054W CSM4Q08955 156 aa3.72□□□□□ -1.81
TIM54YJL054W FMP49A0A023PZB3 126 aa3.71□□□□□ -1.82
TIM54YJL054W MRPL31P14063 131 aaPredicted RBP3.71□□□□□ -1.82
TIM54YJL054W SEC59P20048 519 aa3.71□□□□□ -1.82
TIM54YJL054W QRI5P32344 111 aa3.71□□□□□ -1.82
TIM54YJL054W YHR140WP38842 239 aa3.71□□□□□ -1.82
TIM54YJL054W SRP14P38985 146 aa3.71□□□□□ -1.82
TIM54YJL054W HIT1P46973 164 aa3.71□□□□□ -1.82
TIM54YJL054W NAT3Q06504 195 aa3.71□□□□□ -1.82
TIM54YJL054W SMT3Q12306 101 aaKnown RBP3.71□□□□□ -1.82
TIM54YJL054W YPL229WQ99395 206 aa3.71□□□□□ -1.82
TIM54YJL054W RPL27AP0C2H6 136 aaKnown RBP3.7□□□□□ -1.82
TIM54YJL054W PMP3P87284 55 aa3.7□□□□□ -1.82
TIM54YJL054W GIM5Q04493 163 aa3.7□□□□□ -1.82
TIM54YJL054W DCN1Q12395 269 aa3.7□□□□□ -1.82
TIM54YJL054W FMP16Q12497 93 aa3.7□□□□□ -1.82
TIM54YJL054W YMR122W-AQ3E842 84 aa3.7□□□□□ -1.82
TIM54YJL054W YCL001W-BQ96VH2 84 aa3.7□□□□□ -1.82
TIM54YJL054W UBC5P15732 148 aa3.7□□□□□ -1.82
TIM54YJL054W LDS1P31379 325 aa3.7□□□□□ -1.82
TIM54YJL054W MIX23P38162 196 aa3.7□□□□□ -1.82
TIM54YJL054W RPB11P38902 120 aa3.7□□□□□ -1.82
TIM54YJL054W YPR010C-AA5Z2X5 72 aa3.69□□□□□ -1.82
TIM54YJL054W CUP2P15315 225 aa3.69□□□□□ -1.82
TIM54YJL054W SVP26P38869 228 aa3.69□□□□□ -1.82
TIM54YJL054W BNS1P50084 137 aa3.69□□□□□ -1.82
TIM54YJL054W GPI19Q04082 140 aa3.69□□□□□ -1.82
TIM54YJL054W YDR115WQ04598 105 aa3.69□□□□□ -1.82
TIM54YJL054W TVP18Q04767 167 aa3.69□□□□□ -1.82
TIM54YJL054W ARC18Q05933 178 aaKnown RBP3.69□□□□□ -1.82
TIM54YJL054W DXO1Q06349 442 aa3.69□□□□□ -1.82
TIM54YJL054W ATP14Q12349 124 aa3.69□□□□□ -1.82
TIM54YJL054W VMA9Q3E7B6 73 aa3.69□□□□□ -1.82
TIM54YJL054W RRT15Q3E811 62 aa3.69□□□□□ -1.82
TIM54YJL054W YBR013CP38215 129 aa3.68□□□□□ -1.82
TIM54YJL054W YGR017WP53210 297 aa3.68□□□□□ -1.82
TIM54YJL054W THG1P53215 237 aaKnown RBP3.68□□□□□ -1.82
TIM54YJL054W SNU23Q12368 194 aaPredicted RBP3.68□□□□□ -1.82
TIM54YJL054W HMRA1P0CY11 126 aa3.67□□□□□ -1.82
TIM54YJL054W SRB6P32570 121 aa3.67□□□□□ -1.82
TIM54YJL054W ZRT1P32804 376 aa3.67□□□□□ -1.82
TIM54YJL054W VMA7P39111 118 aa3.67□□□□□ -1.82
TIM54YJL054W PAU7P39545 55 aa3.67□□□□□ -1.82
TIM54YJL054W PAU5P43575 122 aa3.67□□□□□ -1.82
TIM54YJL054W BET5Q03630 159 aa3.67□□□□□ -1.82
TIM54YJL054W YMR320WQ04897 101 aa3.67□□□□□ -1.82
TIM54YJL054W FCF1Q05498 189 aaPredicted RBP3.67□□□□□ -1.82
TIM54YJL054W YDR034C-AP0C289 58 aa3.66□□□□□ -1.82
TIM54YJL054W MRP49P32388 137 aa3.66□□□□□ -1.82
TIM54YJL054W RPL32P38061 130 aaKnown RBP3.66□□□□□ -1.82
TIM54YJL054W HSP10P38910 106 aa3.66□□□□□ -1.82
TIM54YJL054W ARC15P40518 154 aaRIP-Chip data3.66□□□□□ -1.82not detected
TIM54YJL054W MRPS9P38120 278 aa3.65□□□□□ -1.83
TIM54YJL054W ERG28P40030 148 aa3.65□□□□□ -1.83
TIM54YJL054W GTO3Q04806 366 aa3.65□□□□□ -1.83
TIM54YJL054W YAR023CD6VPM8 179 aa3.64□□□□□ -1.83
TIM54YJL054W DCV1P43595 202 aa3.64□□□□□ -1.83
TIM54YJL054W YGR149WP48236 432 aa3.64□□□□□ -1.83
TIM54YJL054W POM33Q12164 279 aa3.64□□□□□ -1.83
TIM54YJL054W ADH3P07246 375 aaKnown RBP3.63□□□□□ -1.83
TIM54YJL054W YGL010WP25338 174 aa3.63□□□□□ -1.83
TIM54YJL054W APS2Q00381 147 aa3.63□□□□□ -1.83
TIM54YJL054W DFM1Q12743 341 aaKnown RBP3.63□□□□□ -1.83
TIM54YJL054W YNR034W-AQ3E841 98 aa3.63□□□□□ -1.83
TIM54YJL054W NHP6AP11632 93 aaKnown RBP3.62□□□□□ -1.83
TIM54YJL054W RPL16AP26784 199 aaKnown RBP3.62□□□□□ -1.83
TIM54YJL054W NTF2P33331 125 aaKnown RBP3.62□□□□□ -1.83
TIM54YJL054W YIL059CP40520 121 aa3.62□□□□□ -1.83
TIM54YJL054W YOP1Q12402 180 aa3.62□□□□□ -1.83
TIM54YJL054W PAM17P36147 197 aa3.61□□□□□ -1.83
TIM54YJL054W YKR070WP36151 352 aaKnown RBP3.61□□□□□ -1.83
TIM54YJL054W YKR032WP36127 104 aa3.61□□□□□ -1.83
TIM54YJL054W YLR118CQ12354 227 aa3.61□□□□□ -1.83
TIM54YJL054W DAD2P36162 133 aa3.6□□□□□ -1.83
TIM54YJL054W SEC72P39742 193 aaKnown RBP3.6□□□□□ -1.83
TIM54YJL054W SDS23P53172 527 aa3.6□□□□□ -1.83
TIM54YJL054W RPL23AP0CX41 137 aaKnown RBP3.59□□□□□ -1.84
TIM54YJL054W RPL23BP0CX42 137 aaKnown RBP3.59□□□□□ -1.84
TIM54YJL054W YBR209WP38311 105 aa3.59□□□□□ -1.84
TIM54YJL054W YER076CP40049 302 aa3.59□□□□□ -1.84
TIM54YJL054W RPC10P40422 70 aa3.59□□□□□ -1.84
TIM54YJL054W FSF1Q12029 327 aaKnown RBP3.59□□□□□ -1.84
TIM54YJL054W DAN1P47178 298 aa3.58□□□□□ -1.84
TIM54YJL054W YGL088WP53151 121 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms