RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W NMA1Q06178 401 aaKnown RBP0.81□□□□□ -2.28
PEP8YJL053W YDL241WQ07738 123 aa0.81□□□□□ -2.28
PEP8YJL053W HYP2P23301 157 aaKnown RBP0.8□□□□□ -2.28
PEP8YJL053W BUB2P26448 306 aaPredicted RBP0.8□□□□□ -2.28
PEP8YJL053W CYC2P38909 366 aa0.8□□□□□ -2.28
PEP8YJL053W YEL014CP39999 101 aa0.8□□□□□ -2.28
PEP8YJL053W GIM4P40005 111 aaKnown RBP0.8□□□□□ -2.28
PEP8YJL053W APQ12P40532 138 aa0.8□□□□□ -2.28
PEP8YJL053W YGL193CP53097 103 aa0.8□□□□□ -2.28
PEP8YJL053W SWC7Q06707 132 aa0.8□□□□□ -2.28
PEP8YJL053W YIL046W-AQ3E7Z4 54 aa0.8□□□□□ -2.28
PEP8YJL053W RPS28BP0C0X0 67 aaKnown RBP0.79□□□□□ -2.28
PEP8YJL053W AME1P38313 324 aa0.79□□□□□ -2.28
PEP8YJL053W EMC4P53073 190 aa0.79□□□□□ -2.28
PEP8YJL053W ATP19P81451 68 aa0.79□□□□□ -2.28
PEP8YJL053W NHP10Q03435 203 aa0.79□□□□□ -2.28
PEP8YJL053W FMN1Q03778 218 aa0.79□□□□□ -2.28
PEP8YJL053W YPR202WQ08993 238 aa0.79□□□□□ -2.28
PEP8YJL053W OCA6Q12454 224 aa0.79□□□□□ -2.28
PEP8YJL053W RPS28AQ3E7X9 67 aaPredicted RBP0.79□□□□□ -2.28
PEP8YJL053W RPL43AP0CX25 92 aaKnown RBP0.78□□□□□ -2.28
PEP8YJL053W RPL43BP0CX26 92 aa0.78□□□□□ -2.28
PEP8YJL053W YCR001WP25347 104 aa0.78□□□□□ -2.28
PEP8YJL053W YBR027CP38220 110 aa0.78□□□□□ -2.28
PEP8YJL053W TRS20P38334 175 aa0.78□□□□□ -2.28
PEP8YJL053W YIL086CP40503 102 aa0.78□□□□□ -2.28
PEP8YJL053W RCF2P53721 224 aa0.78□□□□□ -2.28
PEP8YJL053W RRT7Q07829 113 aa0.78□□□□□ -2.28
PEP8YJL053W YOR072WQ08486 104 aa0.78□□□□□ -2.28
PEP8YJL053W NSL1Q12143 216 aa0.78□□□□□ -2.28
PEP8YJL053W YOR032W-AQ8TGS1 66 aa0.78□□□□□ -2.28
PEP8YJL053W YOL013W-AP0C272 63 aaPredicted RBP0.77□□□□□ -2.29
PEP8YJL053W NMT1P14743 455 aa0.77□□□□□ -2.29
PEP8YJL053W YCR099CP25657 155 aa0.77□□□□□ -2.29
PEP8YJL053W RPS1AP33442 255 aaKnown RBP0.77□□□□□ -2.29
PEP8YJL053W DER1P38307 211 aa0.77□□□□□ -2.29
PEP8YJL053W FIP1P45976 327 aa0.77□□□□□ -2.29
PEP8YJL053W EFM5P53200 248 aaKnown RBP0.77□□□□□ -2.29
PEP8YJL053W HSP150P32478 413 aa0.76□□□□□ -2.29
PEP8YJL053W SUI1P32911 108 aaKnown RBP0.76□□□□□ -2.29
PEP8YJL053W YER181CP40097 107 aa0.76□□□□□ -2.29
PEP8YJL053W RPS12P48589 143 aaKnown RBP0.76□□□□□ -2.29
PEP8YJL053W YOR097CQ12274 175 aaPredicted RBP0.76□□□□□ -2.29
PEP8YJL053W CMC4Q3E7A9 73 aa0.76□□□□□ -2.29
PEP8YJL053W YHR213W-BQ8TGK1 99 aa0.76□□□□□ -2.29
PEP8YJL053W LAA1P39526 2014 aa0.76□□□□□ -2.29
PEP8YJL053W YSF3P0C074 85 aaPredicted RBP0.75□□□□□ -2.29
PEP8YJL053W MRS4P23500 304 aa0.75□□□□□ -2.29
PEP8YJL053W SRP21P32342 167 aa0.75□□□□□ -2.29
PEP8YJL053W RPS27AP35997 82 aaKnown RBP0.75□□□□□ -2.29
PEP8YJL053W RPS27BP38711 82 aa0.75□□□□□ -2.29
PEP8YJL053W IPT1P38954 527 aa0.75□□□□□ -2.29
PEP8YJL053W YNL122CP53921 115 aaPredicted RBP0.75□□□□□ -2.29
PEP8YJL053W YDR278CQ05612 105 aa0.75□□□□□ -2.29
PEP8YJL053W RFU1Q08003 200 aa0.75□□□□□ -2.29
PEP8YJL053W PET20Q99373 253 aa0.75□□□□□ -2.29
PEP8YJL053W URA2P07259 2214 aaKnown RBP0.74□□□□□ -2.29
PEP8YJL053W ECM29P38737 1868 aa0.74□□□□□ -2.29
PEP8YJL053W YFR010W-AP0C5N0 62 aa0.74□□□□□ -2.29
PEP8YJL053W YHR214C-DP0CX93 97 aa0.74□□□□□ -2.29
PEP8YJL053W FIG1P38224 298 aa0.74□□□□□ -2.29
PEP8YJL053W PRS3P38689 320 aaKnown RBP0.74□□□□□ -2.29
PEP8YJL053W SMX2P40204 77 aaKnown RBP0.74□□□□□ -2.29
PEP8YJL053W YJL218WP40892 196 aaKnown RBP0.74□□□□□ -2.29
PEP8YJL053W PHB1P40961 287 aa0.74□□□□□ -2.29
PEP8YJL053W CSN9Q03981 162 aa0.74□□□□□ -2.29
PEP8YJL053W YPR153WQ06537 140 aa0.74□□□□□ -2.29
PEP8YJL053W IRC19Q07843 230 aa0.74□□□□□ -2.29
PEP8YJL053W MHF1Q3E835 90 aa0.74□□□□□ -2.29
PEP8YJL053W Q0144Q9ZZW2 109 aa0.74□□□□□ -2.29
PEP8YJL053W RPS1BP23248 255 aaKnown RBP0.73□□□□□ -2.29
PEP8YJL053W MRPL24P36525 258 aaPredicted RBP0.73□□□□□ -2.29
PEP8YJL053W ATG8P38182 117 aaRIP-Chip data0.73□□□□□ -2.29not detected
PEP8YJL053W GPI2P46961 280 aa0.73□□□□□ -2.29
PEP8YJL053W VMA10P48836 114 aaKnown RBP0.73□□□□□ -2.29
PEP8YJL053W SED1Q01589 338 aa0.73□□□□□ -2.29
PEP8YJL053W NCE101Q02820 53 aa0.73□□□□□ -2.29
PEP8YJL053W MIX14Q04341 121 aa0.73□□□□□ -2.29
PEP8YJL053W YMR320WQ04897 101 aa0.73□□□□□ -2.29
PEP8YJL053W GPI11Q06636 219 aa0.73□□□□□ -2.29
PEP8YJL053W SCS22Q6Q595 175 aa0.73□□□□□ -2.29
PEP8YJL053W RPL33AP05744 107 aaKnown RBP0.72□□□□□ -2.29
PEP8YJL053W RPS22AP0C0W1 130 aaKnown RBP0.72□□□□□ -2.29
PEP8YJL053W DDR48P18899 430 aaKnown RBP0.72□□□□□ -2.29
PEP8YJL053W RPC19P28000 142 aaKnown RBP0.72□□□□□ -2.29
PEP8YJL053W YBR032WP38223 100 aa0.72□□□□□ -2.29
PEP8YJL053W RGI1P40043 161 aaPredicted RBP0.72□□□□□ -2.29
PEP8YJL053W YGR201CP42936 225 aa0.72□□□□□ -2.29
PEP8YJL053W RAF1Q06891 181 aa0.72□□□□□ -2.29
PEP8YJL053W RPS22BQ3E7Y3 130 aaKnown RBP0.72□□□□□ -2.29
PEP8YJL053W NHP6AP11632 93 aaKnown RBP0.71□□□□□ -2.3
PEP8YJL053W SRL3P36167 246 aa0.71□□□□□ -2.3
PEP8YJL053W IPI1P38803 334 aaPredicted RBP0.71□□□□□ -2.3
PEP8YJL053W HHY1P39982 102 aa0.71□□□□□ -2.3
PEP8YJL053W YJL009WP47078 108 aa0.71□□□□□ -2.3
PEP8YJL053W SIP18P50263 79 aa0.71□□□□□ -2.3
PEP8YJL053W MPC1P53157 130 aaKnown RBP0.71□□□□□ -2.3
PEP8YJL053W MGR2Q02889 113 aa0.71□□□□□ -2.3
PEP8YJL053W RAV2Q03956 351 aa0.71□□□□□ -2.3
PEP8YJL053W IRC21Q04772 201 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms