RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W RNA15P25299 296 aaPredicted RBP4.13□□□□□ -1.75
PRE3YJL001W YCR023CP25351 611 aa4.13□□□□□ -1.75
PRE3YJL001W YLR042CQ07990 161 aa4.13□□□□□ -1.75
PRE3YJL001W MGA1P53050 456 aa4.12□□□□□ -1.75
PRE3YJL001W PAU4P53427 120 aa4.12□□□□□ -1.75
PRE3YJL001W DAD4P69851 72 aa4.12□□□□□ -1.75
PRE3YJL001W DGA1Q08650 418 aa4.12□□□□□ -1.75
PRE3YJL001W UTP23Q12339 254 aaKnown RBP4.12□□□□□ -1.75
PRE3YJL001W YJL197C-AP0C5P0 93 aa4.11□□□□□ -1.75
PRE3YJL001W SHG1P38337 142 aa4.11□□□□□ -1.75
PRE3YJL001W SVP26P38869 228 aa4.11□□□□□ -1.75
PRE3YJL001W YIL163CP40448 117 aa4.11□□□□□ -1.75
PRE3YJL001W POG1P40473 351 aa4.11□□□□□ -1.75
PRE3YJL001W COX16P47081 118 aa4.11□□□□□ -1.75
PRE3YJL001W PAU1P0CE88 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU14P0CE89 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU6P0CE90 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU18P0CE91 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU8P0CE92 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU11P0CE93 120 aa4.1□□□□□ -1.75
PRE3YJL001W PAU13P38725 120 aa4.1□□□□□ -1.75
PRE3YJL001W YFR057WP43625 151 aa4.1□□□□□ -1.75
PRE3YJL001W YGL185CP53100 379 aa4.1□□□□□ -1.75
PRE3YJL001W PAU10Q03050 120 aa4.1□□□□□ -1.75
PRE3YJL001W FCF1Q05498 189 aaPredicted RBP4.1□□□□□ -1.75
PRE3YJL001W PAU20Q08322 120 aa4.1□□□□□ -1.75
PRE3YJL001W DAD1Q12248 94 aa4.1□□□□□ -1.75
PRE3YJL001W PAU9Q3E770 120 aa4.1□□□□□ -1.75
PRE3YJL001W ERI1P62651 68 aaKnown RBP4.09□□□□□ -1.75
PRE3YJL001W RPL16AP26784 199 aaKnown RBP4.08□□□□□ -1.76
PRE3YJL001W YKL070WP36087 169 aa4.08□□□□□ -1.76
PRE3YJL001W TIM21P53220 239 aa4.08□□□□□ -1.76
PRE3YJL001W TIM22Q12328 207 aa4.08□□□□□ -1.76
PRE3YJL001W YPR010C-AA5Z2X5 72 aa4.07□□□□□ -1.76
PRE3YJL001W RPS22AP0C0W1 130 aaKnown RBP4.07□□□□□ -1.76
PRE3YJL001W UBC5P15732 148 aa4.07□□□□□ -1.76
PRE3YJL001W YBR090CP38253 122 aa4.07□□□□□ -1.76
PRE3YJL001W CYB5P40312 120 aa4.07□□□□□ -1.76
PRE3YJL001W YMR122W-AQ3E842 84 aa4.07□□□□□ -1.76
PRE3YJL001W SEC59P20048 519 aa4.06□□□□□ -1.76
PRE3YJL001W FZF1P32805 299 aa4.06□□□□□ -1.76
PRE3YJL001W SUR2P38992 349 aa4.06□□□□□ -1.76
PRE3YJL001W PGD1P40356 397 aa4.06□□□□□ -1.76
PRE3YJL001W SNN1P48232 102 aa4.06□□□□□ -1.76
PRE3YJL001W BNS1P50084 137 aa4.06□□□□□ -1.76
PRE3YJL001W YMR320WQ04897 101 aa4.06□□□□□ -1.76
PRE3YJL001W FMP16Q12497 93 aa4.06□□□□□ -1.76
PRE3YJL001W YLR307C-AQ3E825 87 aa4.06□□□□□ -1.76
PRE3YJL001W YAR023CD6VPM8 179 aa4.05□□□□□ -1.76
PRE3YJL001W ADH2P00331 348 aaKnown RBP4.05□□□□□ -1.76
PRE3YJL001W YBR013CP38215 129 aa4.05□□□□□ -1.76
PRE3YJL001W YIL059CP40520 121 aa4.05□□□□□ -1.76
PRE3YJL001W YFR045WP43617 309 aa4.05□□□□□ -1.76
PRE3YJL001W YGR026WP53217 278 aa4.05□□□□□ -1.76
PRE3YJL001W DIA1P54005 336 aa4.05□□□□□ -1.76
PRE3YJL001W ATP19P81451 68 aa4.05□□□□□ -1.76
PRE3YJL001W UPS3Q04006 179 aa4.05□□□□□ -1.76
PRE3YJL001W POF1P25576 258 aa4.04□□□□□ -1.76
PRE3YJL001W HIT1P46973 164 aa4.04□□□□□ -1.76
PRE3YJL001W UBC12P52491 188 aa4.04□□□□□ -1.76
PRE3YJL001W LCL1Q02786 101 aa4.04□□□□□ -1.76
PRE3YJL001W YOR105WQ08504 108 aa4.04□□□□□ -1.76
PRE3YJL001W ATP14Q12349 124 aa4.04□□□□□ -1.76
PRE3YJL001W RPL23AP0CX41 137 aaKnown RBP4.03□□□□□ -1.76
PRE3YJL001W RPL23BP0CX42 137 aaKnown RBP4.03□□□□□ -1.76
PRE3YJL001W SRP21P32342 167 aa4.03□□□□□ -1.76
PRE3YJL001W TEM1P38987 245 aa4.03□□□□□ -1.76
PRE3YJL001W YGR017WP53210 297 aa4.03□□□□□ -1.76
PRE3YJL001W PMP3P87284 55 aa4.03□□□□□ -1.76
PRE3YJL001W YPL080CQ02826 108 aa4.03□□□□□ -1.76
PRE3YJL001W VMA9Q3E7B6 73 aa4.03□□□□□ -1.76
PRE3YJL001W PCC1Q3E833 88 aa4.03□□□□□ -1.76
PRE3YJL001W TIR1P10863 254 aa4.02□□□□□ -1.77
PRE3YJL001W SRP14P38985 146 aa4.02□□□□□ -1.77
PRE3YJL001W VMA7P39111 118 aa4.02□□□□□ -1.77
PRE3YJL001W OXA1P39952 402 aa4.02□□□□□ -1.77
PRE3YJL001W ARC15P40518 154 aaRIP-Chip data4.02□□□□□ -1.77not detected
PRE3YJL001W NAT3Q06504 195 aa4.02□□□□□ -1.77
PRE3YJL001W ZRT1P32804 376 aa4.01□□□□□ -1.77
PRE3YJL001W PHS1P40857 217 aa4.01□□□□□ -1.77
PRE3YJL001W DAD3P69850 94 aa4.01□□□□□ -1.77
PRE3YJL001W DXO1Q06349 442 aa4.01□□□□□ -1.77
PRE3YJL001W YCL001W-BQ96VH2 84 aa4.01□□□□□ -1.77
PRE3YJL001W FMP49A0A023PZB3 126 aa4□□□□□ -1.77
PRE3YJL001W MRPL31P14063 131 aaPredicted RBP4□□□□□ -1.77
PRE3YJL001W QRI5P32344 111 aa4□□□□□ -1.77
PRE3YJL001W MRP49P32388 137 aa4□□□□□ -1.77
PRE3YJL001W MMS2P53152 137 aa4□□□□□ -1.77
PRE3YJL001W YDR029WQ12111 104 aa4□□□□□ -1.77
PRE3YJL001W SMT3Q12306 101 aaKnown RBP4□□□□□ -1.77
PRE3YJL001W LDS1P31379 325 aa3.99□□□□□ -1.77
PRE3YJL001W ERG28P40030 148 aa3.99□□□□□ -1.77
PRE3YJL001W MOG1P47123 218 aa3.99□□□□□ -1.77
PRE3YJL001W YLR194CQ05777 254 aa3.99□□□□□ -1.77
PRE3YJL001W SRB6P32570 121 aa3.98□□□□□ -1.77
PRE3YJL001W SMP1P38128 452 aa3.98□□□□□ -1.77
PRE3YJL001W RPB11P38902 120 aa3.98□□□□□ -1.77
PRE3YJL001W GIM5Q04493 163 aa3.98□□□□□ -1.77
PRE3YJL001W ATP16Q12165 160 aa3.98□□□□□ -1.77
PRE3YJL001W SNU23Q12368 194 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms