RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	CDC43	P18898	376 aa		2.6	□□□□□ -1.99
TMA108	YIL137C	YDR115W	Q04598	105 aa		2.6	□□□□□ -1.99
TMA108	YIL137C	VPS68	Q12016	184 aa		2.6	□□□□□ -1.99
TMA108	YIL137C	RAS2	P01120	322 aa	Known RBP	2.6	□□□□□ -1.99
TMA108	YIL137C	EMP24	P32803	203 aa	Known RBP	2.6	□□□□□ -1.99
TMA108	YIL137C	YNL217W	P40152	326 aa		2.6	□□□□□ -1.99
TMA108	YIL137C	YGL118C	P53132	145 aa		2.6	□□□□□ -1.99
TMA108	YIL137C	NUM1	Q00402	2748 aa		2.59	□□□□□ -1.99
TMA108	YIL137C	COX5B	P00425	151 aa		2.59	□□□□□ -2
TMA108	YIL137C	RRT13	P40042	185 aa		2.59	□□□□□ -2
TMA108	YIL137C	ARC15	P40518	154 aa	RIP-Chip data	2.59	□□□□□ -2	not detected
TMA108	YIL137C	PAU12	P53343	120 aa		2.59	□□□□□ -2
TMA108	YIL137C	PBA1	Q05778	276 aa		2.59	□□□□□ -2
TMA108	YIL137C	KEI1	Q06346	221 aa		2.59	□□□□□ -2
TMA108	YIL137C	FEX1	Q08913	375 aa		2.59	□□□□□ -2
TMA108	YIL137C	FEX2	Q08991	375 aa		2.59	□□□□□ -2
TMA108	YIL137C	KNH1	P50112	268 aa		2.58	□□□□□ -2
TMA108	YIL137C	YOS1	Q3E834	85 aa		2.58	□□□□□ -2
TMA108	YIL137C	KSH1	Q8TGJ3	72 aa		2.58	□□□□□ -2
TMA108	YIL137C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
TMA108	YIL137C	CLB6	P32943	380 aa		2.58	□□□□□ -2
TMA108	YIL137C	KRE9	P39005	276 aa		2.58	□□□□□ -2
TMA108	YIL137C	YIR035C	P40579	254 aa		2.58	□□□□□ -2
TMA108	YIL137C	YFL012W	P43580	148 aa		2.58	□□□□□ -2
TMA108	YIL137C	GPI19	Q04082	140 aa		2.58	□□□□□ -2
TMA108	YIL137C	SCM4	P32564	187 aa		2.57	□□□□□ -2
TMA108	YIL137C	YAR068W	P39564	161 aa		2.57	□□□□□ -2
TMA108	YIL137C	GTT1	P40582	234 aa		2.57	□□□□□ -2
TMA108	YIL137C	CWP2	P43497	92 aa		2.57	□□□□□ -2
TMA108	YIL137C	CAX4	P53223	239 aa		2.57	□□□□□ -2
TMA108	YIL137C	IRC25	Q07951	179 aa		2.57	□□□□□ -2
TMA108	YIL137C	FIT3	Q08907	204 aa		2.57	□□□□□ -2
TMA108	YIL137C	PAU2	P32612	120 aa		2.57	□□□□□ -2
TMA108	YIL137C	IGD1	P43598	195 aa		2.57	□□□□□ -2
TMA108	YIL137C	YBR298C-A	Q8TGK4	73 aa		2.57	□□□□□ -2
TMA108	YIL137C	MDM35	O60200	86 aa		2.56	□□□□□ -2
TMA108	YIL137C	RAD6	P06104	172 aa		2.56	□□□□□ -2
TMA108	YIL137C	HAP3	P13434	144 aa		2.56	□□□□□ -2
TMA108	YIL137C	YNR077C	P53758	84 aa		2.56	□□□□□ -2
TMA108	YIL137C	YCR099C	P25657	155 aa		2.56	□□□□□ -2
TMA108	YIL137C	YFR035C	P43608	114 aa		2.56	□□□□□ -2
TMA108	YIL137C	CIS3	P47001	227 aa		2.56	□□□□□ -2
TMA108	YIL137C	RSM19	P53733	91 aa	Predicted RBP	2.56	□□□□□ -2
TMA108	YIL137C	LIP1	Q03579	150 aa		2.56	□□□□□ -2
TMA108	YIL137C	SHH3	Q04487	196 aa		2.56	□□□□□ -2
TMA108	YIL137C	YLR365W	Q7LIF2	110 aa		2.56	□□□□□ -2
TMA108	YIL137C	FMP27	Q06179	2628 aa		2.56	□□□□□ -2
TMA108	YIL137C	ADH3	P07246	375 aa	Known RBP	2.55	□□□□□ -2
TMA108	YIL137C	YHR032W-A	P0C5N6	59 aa		2.55	□□□□□ -2
TMA108	YIL137C	FYV5	P25585	152 aa		2.55	□□□□□ -2
TMA108	YIL137C	YHR180W	P38868	163 aa		2.55	□□□□□ -2
TMA108	YIL137C	SMX2	P40204	77 aa	Known RBP	2.55	□□□□□ -2
TMA108	YIL137C	FLX1	P40464	311 aa		2.55	□□□□□ -2
TMA108	YIL137C	MRPS8	Q03799	155 aa		2.55	□□□□□ -2
TMA108	YIL137C	TEL1	P38110	2787 aa		2.55	□□□□□ -2
TMA108	YIL137C	BPH1	P25356	2167 aa		2.55	□□□□□ -2
TMA108	YIL137C	FZF1	P32805	299 aa		2.55	□□□□□ -2
TMA108	YIL137C	PAU24	P38155	120 aa		2.55	□□□□□ -2
TMA108	YIL137C	EMC5	P40540	141 aa		2.55	□□□□□ -2
TMA108	YIL137C	MSL1	P40567	111 aa	Predicted RBP	2.55	□□□□□ -2
TMA108	YIL137C	YFL067W	P43537	175 aa		2.55	□□□□□ -2
TMA108	YIL137C	DSK2	P48510	373 aa		2.55	□□□□□ -2
TMA108	YIL137C	THG1	P53215	237 aa	Known RBP	2.55	□□□□□ -2
TMA108	YIL137C	IRC19	Q07843	230 aa		2.55	□□□□□ -2
TMA108	YIL137C	YIL046W-A	Q3E7Z4	54 aa		2.55	□□□□□ -2
TMA108	YIL137C	BOL2	P53082	120 aa		2.55	□□□□□ -2
TMA108	YIL137C	ERV14	P53173	138 aa		2.55	□□□□□ -2
TMA108	YIL137C	YPL067C	Q02754	198 aa		2.55	□□□□□ -2
TMA108	YIL137C	YMR030W-A	Q3E760	96 aa		2.55	□□□□□ -2
TMA108	YIL137C	SRB6	P32570	121 aa		2.54	□□□□□ -2
TMA108	YIL137C	PTH1	P38876	190 aa	Known RBP	2.54	□□□□□ -2
TMA108	YIL137C	YMR090W	Q04304	227 aa	Known RBP	2.54	□□□□□ -2
TMA108	YIL137C	RAF1	Q06891	181 aa		2.54	□□□□□ -2
TMA108	YIL137C	YGL149W	P53116	101 aa		2.54	□□□□□ -2
TMA108	YIL137C	YGR026W	P53217	278 aa		2.53	□□□□□ -2
TMA108	YIL137C	YIL014C-A	Q02598	104 aa		2.53	□□□□□ -2
TMA108	YIL137C	POL2	P21951	2222 aa	Known RBP	2.53	□□□□□ -2
TMA108	YIL137C	QCR10	P37299	77 aa		2.53	□□□□□ -2
TMA108	YIL137C	PIR5	P46999	287 aa		2.53	□□□□□ -2
TMA108	YIL137C	YJL027C	P47063	138 aa	Predicted RBP	2.53	□□□□□ -2
TMA108	YIL137C	SCW4	P53334	386 aa	Known RBP	2.53	□□□□□ -2
TMA108	YIL137C	SOM1	Q05676	74 aa		2.53	□□□□□ -2
TMA108	YIL137C	IRC23	Q08416	157 aa		2.53	□□□□□ -2
TMA108	YIL137C	ATG40	Q99325	256 aa		2.53	□□□□□ -2
TMA108	YIL137C	IPT1	P38954	527 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	RPL13B	P40212	199 aa	Known RBP	2.52	□□□□□ -2.01
TMA108	YIL137C	PEP8	P40335	379 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	TIR3	P40552	269 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	YHP1	Q04116	353 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	BRR2	P32639	2163 aa	Known RBP	2.52	□□□□□ -2.01
TMA108	YIL137C	YBR032W	P38223	100 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	UPS3	Q04006	179 aa		2.52	□□□□□ -2.01
TMA108	YIL137C	PAU19	P0CE85	124 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	MRPL44	P19956	98 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	PAU3	P25610	124 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	UTR5	P32630	166 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	FMT1	P32785	401 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	YBL059W	P34224	193 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	UBC4	P15731	148 aa		2.51	□□□□□ -2.01
TMA108	YIL137C	ECM12	O13529	151 aa		2.5	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms