RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W PDS1P40316 373 aaPredicted RBP0.99□□□□□ -2.25
SEC28YIL076W ORM1P53224 222 aa0.99□□□□□ -2.25
SEC28YIL076W DYN2Q02647 92 aa0.99□□□□□ -2.25
SEC28YIL076W FRQ1Q06389 190 aa0.99□□□□□ -2.25
SEC28YIL076W YLR031WQ07978 186 aa0.99□□□□□ -2.25
SEC28YIL076W YOL160WQ08321 113 aa0.99□□□□□ -2.25
SEC28YIL076W SCP1Q08873 200 aa0.99□□□□□ -2.25
SEC28YIL076W YOR011W-AQ3E807 68 aa0.99□□□□□ -2.25
SEC28YIL076W TDA8Q6B2U8 126 aa0.99□□□□□ -2.25
SEC28YIL076W ARG80P07249 177 aa0.98□□□□□ -2.25
SEC28YIL076W RPS11AP0CX47 156 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W RPS11BP0CX48 156 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W RPL24BP24000 155 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W RRT1P38192 103 aa0.98□□□□□ -2.25
SEC28YIL076W NSA2P40078 261 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W GVP36P40531 326 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W LSM1P47017 172 aaKnown RBP0.98□□□□□ -2.25
SEC28YIL076W YIP3P53633 176 aa0.98□□□□□ -2.25
SEC28YIL076W SGF11Q03067 99 aa0.98□□□□□ -2.25
SEC28YIL076W CCW12Q12127 133 aa0.98□□□□□ -2.25
SEC28YIL076W POC4Q12245 148 aaPredicted RBP0.98□□□□□ -2.25
SEC28YIL076W COA2Q3E823 68 aa0.98□□□□□ -2.25
SEC28YIL076W YLL066W-BQ8TGJ7 56 aa0.98□□□□□ -2.25
SEC28YIL076W NHP6BP11633 99 aaKnown RBP0.97□□□□□ -2.25
SEC28YIL076W URA5P13298 226 aaKnown RBP0.97□□□□□ -2.25
SEC28YIL076W YCR001WP25347 104 aa0.97□□□□□ -2.25
SEC28YIL076W PAN3P36102 679 aaPredicted RBP0.97□□□□□ -2.25
SEC28YIL076W HPA3P39979 161 aa0.97□□□□□ -2.25
SEC28YIL076W SPI1P40092 148 aa0.97□□□□□ -2.25
SEC28YIL076W YNL200CP40165 246 aaKnown RBP0.97□□□□□ -2.25
SEC28YIL076W YJR015WP47090 510 aa0.97□□□□□ -2.25
SEC28YIL076W AIM25P47140 327 aa0.97□□□□□ -2.25
SEC28YIL076W VPS28Q02767 242 aa0.97□□□□□ -2.25
SEC28YIL076W SNO1Q03144 224 aa0.97□□□□□ -2.25
SEC28YIL076W LCL2Q08045 131 aa0.97□□□□□ -2.25
SEC28YIL076W SUS1Q6WNK7 96 aa0.97□□□□□ -2.25
SEC28YIL076W MRP17P28778 131 aa0.96□□□□□ -2.26
SEC28YIL076W SPT14P32363 452 aa0.96□□□□□ -2.26
SEC28YIL076W SHB17P36136 271 aaKnown RBP0.96□□□□□ -2.26
SEC28YIL076W SFT2P38166 215 aa0.96□□□□□ -2.26
SEC28YIL076W LSM2P38203 95 aaKnown RBP0.96□□□□□ -2.26
SEC28YIL076W SLM6P38343 150 aa0.96□□□□□ -2.26
SEC28YIL076W YGR269WP40326 108 aa0.96□□□□□ -2.26
SEC28YIL076W SER2P42941 309 aa0.96□□□□□ -2.26
SEC28YIL076W RBL2P48606 106 aaKnown RBP0.96□□□□□ -2.26
SEC28YIL076W LSM7P53905 115 aaKnown RBP0.96□□□□□ -2.26
SEC28YIL076W TMA20P89886 181 aaPredicted RBP0.96□□□□□ -2.26
SEC28YIL076W SDH7Q04401 133 aa0.96□□□□□ -2.26
SEC28YIL076W YMR253CQ04835 414 aa0.96□□□□□ -2.26
SEC28YIL076W YLR042CQ07990 161 aa0.96□□□□□ -2.26
SEC28YIL076W YDR157WA0A023PZE8 133 aa0.95□□□□□ -2.26
SEC28YIL076W YLR236CA0A023PZG4 107 aa0.95□□□□□ -2.26
SEC28YIL076W RPS25BP0C0T4 108 aaKnown RBP0.95□□□□□ -2.26
SEC28YIL076W RTC3P38804 111 aaPredicted RBP0.95□□□□□ -2.26
SEC28YIL076W SWM2P40342 146 aa0.95□□□□□ -2.26
SEC28YIL076W MIC27P50945 234 aa0.95□□□□□ -2.26
SEC28YIL076W PDR17P53844 350 aa0.95□□□□□ -2.26
SEC28YIL076W GIM3P53900 129 aa0.95□□□□□ -2.26
SEC28YIL076W TMA23Q03525 211 aa0.95□□□□□ -2.26
SEC28YIL076W YMR082CQ04276 118 aa0.95□□□□□ -2.26
SEC28YIL076W YPR145C-AQ2V2P0 78 aa0.95□□□□□ -2.26
SEC28YIL076W YGR240C-AQ3E786 66 aa0.95□□□□□ -2.26
SEC28YIL076W RPS25AQ3E792 108 aaPredicted RBP0.95□□□□□ -2.26
SEC28YIL076W ANB1P19211 157 aa0.94□□□□□ -2.26
SEC28YIL076W EMP24P32803 203 aaKnown RBP0.94□□□□□ -2.26
SEC28YIL076W IPI1P38803 334 aaPredicted RBP0.94□□□□□ -2.26
SEC28YIL076W SPC1P46965 94 aa0.94□□□□□ -2.26
SEC28YIL076W CWC23P52868 283 aaPredicted RBP0.94□□□□□ -2.26
SEC28YIL076W BRP1P53194 125 aa0.94□□□□□ -2.26
SEC28YIL076W YMR090WQ04304 227 aaKnown RBP0.94□□□□□ -2.26
SEC28YIL076W SHH3Q04487 196 aa0.94□□□□□ -2.26
SEC28YIL076W RDI1Q12434 202 aa0.94□□□□□ -2.26
SEC28YIL076W YCR075W-AQ3E830 75 aa0.94□□□□□ -2.26
SEC28YIL076W YHR213W-AQ8TGT4 77 aa0.94□□□□□ -2.26
SEC28YIL076W RTC6O14464 93 aa0.93□□□□□ -2.26
SEC28YIL076W RPL33AP05744 107 aaKnown RBP0.93□□□□□ -2.26
SEC28YIL076W SPS2P08459 502 aa0.93□□□□□ -2.26
SEC28YIL076W GCN3P14741 305 aa0.93□□□□□ -2.26
SEC28YIL076W AHT1P29589 182 aa0.93□□□□□ -2.26
SEC28YIL076W UTP11P34247 250 aaPredicted RBP0.93□□□□□ -2.26
SEC28YIL076W YEA6P39953 335 aa0.93□□□□□ -2.26
SEC28YIL076W YEA4P40004 342 aa0.93□□□□□ -2.26
SEC28YIL076W TOM7P53507 60 aa0.93□□□□□ -2.26
SEC28YIL076W YDR366CP87287 132 aa0.93□□□□□ -2.26
SEC28YIL076W AVO2Q04749 426 aa0.93□□□□□ -2.26
SEC28YIL076W RRT7Q07829 113 aa0.93□□□□□ -2.26
SEC28YIL076W FIT2Q08906 153 aa0.93□□□□□ -2.26
SEC28YIL076W HTB2P02294 131 aa0.92□□□□□ -2.26
SEC28YIL076W MRS1P07266 363 aa0.92□□□□□ -2.26
SEC28YIL076W YJL197C-AP0C5P0 93 aa0.92□□□□□ -2.26
SEC28YIL076W RPB3P16370 318 aaKnown RBP0.92□□□□□ -2.26
SEC28YIL076W CKS1P20486 150 aaKnown RBP0.92□□□□□ -2.26
SEC28YIL076W YCR023CP25351 611 aa0.92□□□□□ -2.26
SEC28YIL076W DER1P38307 211 aa0.92□□□□□ -2.26
SEC28YIL076W COA4Q05809 96 aa0.92□□□□□ -2.26
SEC28YIL076W YBR200W-AQ3E755 54 aa0.92□□□□□ -2.26
SEC28YIL076W RRT15Q3E811 62 aa0.92□□□□□ -2.26
SEC28YIL076W YDR034C-AP0C289 58 aa0.91□□□□□ -2.26
SEC28YIL076W SEC11P15367 167 aa0.91□□□□□ -2.26
SEC28YIL076W UBC5P15732 148 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms