RNA–Protein interactions for RNA: YIL026C

IRR1, Transcript of Subunit of the cohesin complex, yeast

Gene IRR1, Length 3,453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRR1	YIL026C	RPS11A	P0CX47	156 aa	Known RBP	0.86	□□□□□ -2.27
IRR1	YIL026C	RPS11B	P0CX48	156 aa	Known RBP	0.86	□□□□□ -2.27
IRR1	YIL026C	VPS51	P36116	164 aa		0.86	□□□□□ -2.27
IRR1	YIL026C	KNH1	P50112	268 aa		0.86	□□□□□ -2.27
IRR1	YIL026C	YKL023C-A	Q2V2P3	75 aa		0.86	□□□□□ -2.27
IRR1	YIL026C	HMRA1	P0CY11	126 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	RPL30	P14120	105 aa	Known RBP	0.85	□□□□□ -2.27
IRR1	YIL026C	SER2	P42941	309 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	GPI14	P47088	403 aa	Known RBP	0.85	□□□□□ -2.27
IRR1	YIL026C	TDA4	P47153	279 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	IRC23	Q08416	157 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	UBC5	P15732	148 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	QCR9	P22289	66 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	TRS20	P38334	175 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	YPT31	P38555	223 aa	Known RBP	0.85	□□□□□ -2.27
IRR1	YIL026C	YBR292C	P38357	123 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	GAT4	P40569	121 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	YNL190W	P53872	204 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	YNL184C	P53876	108 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	YMR253C	Q04835	414 aa		0.85	□□□□□ -2.27
IRR1	YIL026C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.85	□□□□□ -2.27
IRR1	YIL026C	PRS3	P38689	320 aa	Known RBP	0.84	□□□□□ -2.27
IRR1	YIL026C	HPM1	P40481	377 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	YDR366C	P87287	132 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	NUP49	Q02199	472 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	UPS3	Q04006	179 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	CMC2	Q3E7A4	109 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	RPL33A	P05744	107 aa	Known RBP	0.84	□□□□□ -2.27
IRR1	YIL026C	TOS6	P48560	102 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	DOC1	P53068	250 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	ERI1	P62651	68 aa	Known RBP	0.84	□□□□□ -2.27
IRR1	YIL026C	SDH7	Q04401	133 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	ANT1	Q06497	328 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	YPR145C-A	Q2V2P0	78 aa		0.84	□□□□□ -2.27
IRR1	YIL026C	PGA1	P53896	198 aa		0.84	□□□□□ -2.28
IRR1	YIL026C	SHH4	Q06236	168 aa		0.84	□□□□□ -2.28
IRR1	YIL026C	YLR031W	Q07978	186 aa		0.84	□□□□□ -2.28
IRR1	YIL026C	TMA19	P35691	167 aa	Known RBP	0.83	□□□□□ -2.28
IRR1	YIL026C	VPS55	P47111	140 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YNR064C	P53750	290 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	DID2	P69771	204 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	VPS28	Q02767	242 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	VPS71	Q03433	280 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YPL225W	Q08971	146 aa	Known RBP	0.83	□□□□□ -2.28
IRR1	YIL026C	KIN28	P06242	306 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YBR013C	P38215	129 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	SVP26	P38869	228 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	FIP1	P45976	327 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	CSN9	Q03981	162 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	TEL1	P38110	2787 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	PHO85	P17157	305 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YEA6	P39953	335 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YER076C	P40049	302 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YER134C	P40081	178 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YDR102C	Q03864	110 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	FYV12	Q08559	129 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	FIT3	Q08907	204 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YLL066W-B	Q8TGJ7	56 aa		0.83	□□□□□ -2.28
IRR1	YIL026C	YHR173C	P38864	112 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	TIM13	P53299	105 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	NRK1	P53915	240 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	YPR013C	Q12145	317 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	PFY1	P07274	126 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	YFR010W-A	P0C5N0	62 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	TMA23	Q03525	211 aa		0.82	□□□□□ -2.28
IRR1	YIL026C	RPS28B	P0C0X0	67 aa	Known RBP	0.81	□□□□□ -2.28
IRR1	YIL026C	GSP2	P32836	220 aa	Known RBP	0.81	□□□□□ -2.28
IRR1	YIL026C	YBR242W	P38331	238 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	YER135C	P40082	130 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	POR2	P40478	281 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	GNA1	P43577	159 aa	Predicted RBP	0.81	□□□□□ -2.28
IRR1	YIL026C	YCL001W-A	P87012	153 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.81	□□□□□ -2.28
IRR1	YIL026C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.81	□□□□□ -2.28
IRR1	YIL026C	YCR023C	P25351	611 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	YBL071C	P38185	102 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	SNF11	P38956	169 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	YDR042C	Q03205	200 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	FIT1	Q04433	528 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	SHH3	Q04487	196 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	COA2	Q3E823	68 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	CIN5	P40917	295 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	LST8	P41318	303 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	GRX5	Q02784	150 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	YLR162W	Q06235	118 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	TOM1	Q03280	3268 aa		0.81	□□□□□ -2.28
IRR1	YIL026C	ADK1	P07170	222 aa	Known RBP	0.8	□□□□□ -2.28
IRR1	YIL026C	PAU19	P0CE85	124 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	PAU21	P0CE86	164 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	PAU22	P0CE87	164 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	SEC11	P15367	167 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	PAU3	P25610	124 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	YIP3	P53633	176 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	VMA9	Q3E7B6	73 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	YGR035W-A	Q45U48	73 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	ODC2	Q99297	307 aa		0.8	□□□□□ -2.28
IRR1	YIL026C	RPL2A	P0CX45	254 aa	Known RBP	0.8	□□□□□ -2.28
IRR1	YIL026C	RPL2B	P0CX46	254 aa	Known RBP	0.8	□□□□□ -2.28
IRR1	YIL026C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
IRR1	YIL026C	RPC10	P40422	70 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms