RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W MSA1Q08471 629 aa3.45□□□□□ -1.86
PMC1YGL006W DUO1P53168 247 aaKnown RBP3.45□□□□□ -1.86
PMC1YGL006W YTH1Q06102 208 aaPredicted RBP3.45□□□□□ -1.86
PMC1YGL006W RXT3Q07458 294 aa3.45□□□□□ -1.86
PMC1YGL006W RRT1P38192 103 aa3.45□□□□□ -1.86
PMC1YGL006W SIP18P50263 79 aa3.45□□□□□ -1.86
PMC1YGL006W RPL27AP0C2H6 136 aaKnown RBP3.44□□□□□ -1.86
PMC1YGL006W KNH1P50112 268 aa3.44□□□□□ -1.86
PMC1YGL006W YDR042CQ03205 200 aa3.44□□□□□ -1.86
PMC1YGL006W YCR022CP25620 114 aa3.44□□□□□ -1.86
PMC1YGL006W MRPL39P36533 70 aa3.44□□□□□ -1.86
PMC1YGL006W YHR140WP38842 239 aa3.44□□□□□ -1.86
PMC1YGL006W YOR029WQ12243 111 aa3.44□□□□□ -1.86
PMC1YGL006W YIL046W-AQ3E7Z4 54 aa3.44□□□□□ -1.86
PMC1YGL006W CTR2P38865 189 aa3.44□□□□□ -1.86
PMC1YGL006W PRM7Q12459 698 aa3.44□□□□□ -1.86
PMC1YGL006W CSH1P38287 376 aa3.43□□□□□ -1.86
PMC1YGL006W HST4P53688 370 aa3.43□□□□□ -1.86
PMC1YGL006W MRPL23Q12487 163 aaPredicted RBP3.43□□□□□ -1.86
PMC1YGL006W FLO9P39712 1322 aa3.43□□□□□ -1.86
PMC1YGL006W HEM13P11353 328 aaKnown RBP3.43□□□□□ -1.86
PMC1YGL006W MSN1P22148 382 aa3.43□□□□□ -1.86
PMC1YGL006W YGR018CP53211 109 aa3.43□□□□□ -1.86
PMC1YGL006W YDR209CQ03480 137 aa3.43□□□□□ -1.86
PMC1YGL006W MRPL20P22354 195 aaPredicted RBP3.43□□□□□ -1.86
PMC1YGL006W NRG2P38082 220 aa3.43□□□□□ -1.86
PMC1YGL006W VTC1P40046 129 aaRIP-Chip data3.43□□□□□ -1.86not detected
PMC1YGL006W YDL009CQ12210 107 aa3.43□□□□□ -1.86
PMC1YGL006W YOR097CQ12274 175 aaPredicted RBP3.43□□□□□ -1.86
PMC1YGL006W RPL28P02406 149 aaKnown RBP3.42□□□□□ -1.86
PMC1YGL006W YKR041WP36134 250 aa3.42□□□□□ -1.86
PMC1YGL006W YER076CP40049 302 aa3.42□□□□□ -1.86
PMC1YGL006W YJL118WP47022 219 aa3.42□□□□□ -1.86
PMC1YGL006W GPI19Q04082 140 aa3.42□□□□□ -1.86
PMC1YGL006W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PMC1YGL006W AQY1P0CD91 305 aa3.42□□□□□ -1.86
PMC1YGL006W KTI12P34253 313 aaKnown RBP3.42□□□□□ -1.86
PMC1YGL006W YER121WP40076 114 aa3.42□□□□□ -1.86
PMC1YGL006W COF1Q03048 143 aaKnown RBP3.42□□□□□ -1.86
PMC1YGL006W LSM6Q06406 86 aaKnown RBP3.42□□□□□ -1.86
PMC1YGL006W TIM22Q12328 207 aa3.42□□□□□ -1.86
PMC1YGL006W PRP8P33334 2413 aaKnown RBP3.42□□□□□ -1.86
PMC1YGL006W RPL18AP0CX49 186 aaKnown RBP3.41□□□□□ -1.86
PMC1YGL006W RPL18BP0CX50 186 aaKnown RBP3.41□□□□□ -1.86
PMC1YGL006W ATP15P21306 62 aa3.41□□□□□ -1.86
PMC1YGL006W FIP1P45976 327 aa3.41□□□□□ -1.86
PMC1YGL006W YGL088WP53151 121 aa3.41□□□□□ -1.86
PMC1YGL006W YNL190WP53872 204 aa3.41□□□□□ -1.86
PMC1YGL006W YLR296WQ05898 108 aa3.41□□□□□ -1.86
PMC1YGL006W INO2P26798 304 aa3.41□□□□□ -1.86
PMC1YGL006W YBR209WP38311 105 aa3.41□□□□□ -1.86
PMC1YGL006W YEL067CP39978 195 aa3.41□□□□□ -1.86
PMC1YGL006W GLO1P50107 326 aa3.41□□□□□ -1.86
PMC1YGL006W MOT3P54785 490 aaKnown RBP3.41□□□□□ -1.86
PMC1YGL006W YDL022C-AP0C5L6 82 aa3.41□□□□□ -1.86
PMC1YGL006W GZF3P42944 551 aaKnown RBP3.41□□□□□ -1.86
PMC1YGL006W YFL051CP43552 160 aa3.41□□□□□ -1.86
PMC1YGL006W NCE103P53615 221 aa3.41□□□□□ -1.86
PMC1YGL006W MIX17Q03667 156 aa3.41□□□□□ -1.86
PMC1YGL006W GAR1P28007 205 aaKnown RBP3.4□□□□□ -1.86
PMC1YGL006W UTH1P36135 365 aa3.4□□□□□ -1.86
PMC1YGL006W SAP30P38429 201 aa3.4□□□□□ -1.86
PMC1YGL006W YLR042CQ07990 161 aa3.4□□□□□ -1.86
PMC1YGL006W YDR029WQ12111 104 aa3.4□□□□□ -1.86
PMC1YGL006W YMR105W-AQ8TGS8 64 aa3.4□□□□□ -1.86
PMC1YGL006W YIL059CP40520 121 aa3.4□□□□□ -1.87
PMC1YGL006W PBI2P0CT04 75 aaKnown RBP3.4□□□□□ -1.87
PMC1YGL006W DUT1P33317 147 aa3.4□□□□□ -1.87
PMC1YGL006W ADH5P38113 351 aaKnown RBP3.4□□□□□ -1.87
PMC1YGL006W YNR077CP53758 84 aa3.4□□□□□ -1.87
PMC1YGL006W PBA1Q05778 276 aa3.4□□□□□ -1.87
PMC1YGL006W YLR194CQ05777 254 aa3.39□□□□□ -1.87
PMC1YGL006W IGO2Q9P305 131 aa3.39□□□□□ -1.87
PMC1YGL006W MRPL38P35996 138 aaPredicted RBP3.39□□□□□ -1.87
PMC1YGL006W VPS55P47111 140 aa3.39□□□□□ -1.87
PMC1YGL006W YNL234WP53857 426 aa3.39□□□□□ -1.87
PMC1YGL006W AIM11P87275 137 aa3.39□□□□□ -1.87
PMC1YGL006W YOL085CQ99345 113 aa3.39□□□□□ -1.87
PMC1YGL006W RPL15AP05748 204 aaKnown RBP3.39□□□□□ -1.87
PMC1YGL006W YKL023C-AQ2V2P3 75 aa3.39□□□□□ -1.87
PMC1YGL006W YOR008C-AQ3E7B9 74 aa3.39□□□□□ -1.87
PMC1YGL006W YHR213WP0CI67 198 aa3.38□□□□□ -1.87
PMC1YGL006W YGR025WP53216 100 aa3.38□□□□□ -1.87
PMC1YGL006W RRG8Q06109 277 aa3.38□□□□□ -1.87
PMC1YGL006W ATG33Q06485 197 aa3.38□□□□□ -1.87
PMC1YGL006W FPR2P32472 135 aa3.38□□□□□ -1.87
PMC1YGL006W CMC1P36064 111 aa3.38□□□□□ -1.87
PMC1YGL006W YKR045CP36138 183 aa3.38□□□□□ -1.87
PMC1YGL006W MOH1P38191 138 aa3.38□□□□□ -1.87
PMC1YGL006W YIA6P40556 373 aa3.38□□□□□ -1.87
PMC1YGL006W YAL063C-AQ3E791 96 aa3.38□□□□□ -1.87
PMC1YGL006W YLR361C-AQ3E795 98 aa3.38□□□□□ -1.87
PMC1YGL006W YOR032W-AQ8TGS1 66 aa3.38□□□□□ -1.87
PMC1YGL006W AGA1P32323 725 aa3.37□□□□□ -1.87
PMC1YGL006W FCF1Q05498 189 aaPredicted RBP3.37□□□□□ -1.87
PMC1YGL006W YLR415CO13578 112 aa3.37□□□□□ -1.87
PMC1YGL006W YNL217WP40152 326 aa3.37□□□□□ -1.87
PMC1YGL006W YMR317WQ04893 1140 aa3.37□□□□□ -1.87
PMC1YGL006W YOL160WQ08321 113 aa3.37□□□□□ -1.87
PMC1YGL006W YLR112WQ12130 139 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms