RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W UPS3Q04006 179 aa2.93□□□□□ -1.94
PTR3YFR029W ATG40Q99325 256 aa2.93□□□□□ -1.94
PTR3YFR029W YBT1P32386 1661 aa2.93□□□□□ -1.94
PTR3YFR029W PEP8P40335 379 aa2.93□□□□□ -1.94
PTR3YFR029W EMC5P40540 141 aa2.93□□□□□ -1.94
PTR3YFR029W MSL1P40567 111 aaPredicted RBP2.93□□□□□ -1.94
PTR3YFR029W BOL2P53082 120 aa2.93□□□□□ -1.94
PTR3YFR029W YPL067CQ02754 198 aa2.93□□□□□ -1.94
PTR3YFR029W RPO21P04050 1733 aaKnown RBP2.93□□□□□ -1.94
PTR3YFR029W MDM35O60200 86 aa2.92□□□□□ -1.94
PTR3YFR029W PAU2P32612 120 aa2.92□□□□□ -1.94
PTR3YFR029W TIR3P40552 269 aa2.92□□□□□ -1.94
PTR3YFR029W PIR1Q03178 341 aa2.92□□□□□ -1.94
PTR3YFR029W RAF1Q06891 181 aa2.92□□□□□ -1.94
PTR3YFR029W ARO1P08566 1588 aaKnown RBP2.92□□□□□ -1.94
PTR3YFR029W IRC20Q06554 1556 aa2.92□□□□□ -1.94
PTR3YFR029W NTE1Q04958 1679 aa2.92□□□□□ -1.94
PTR3YFR029W IGO1P53897 168 aa2.92□□□□□ -1.94
PTR3YFR029W SML1Q04964 104 aa2.92□□□□□ -1.94
PTR3YFR029W YPR013CQ12145 317 aa2.92□□□□□ -1.94
PTR3YFR029W SPO14P36126 1683 aa2.91□□□□□ -1.94
PTR3YFR029W YLR236CA0A023PZG4 107 aa2.91□□□□□ -1.94
PTR3YFR029W YER084WP40057 128 aa2.91□□□□□ -1.94
PTR3YFR029W RSM19P53733 91 aaPredicted RBP2.91□□□□□ -1.94
PTR3YFR029W YPR195CQ06594 109 aa2.91□□□□□ -1.94
PTR3YFR029W YOS1Q3E834 85 aa2.91□□□□□ -1.94
PTR3YFR029W ECM12O13529 151 aa2.9□□□□□ -1.94
PTR3YFR029W RPS23AP0CX29 145 aaKnown RBP2.9□□□□□ -1.94
PTR3YFR029W RPS23BP0CX30 145 aa2.9□□□□□ -1.94
PTR3YFR029W MRPL44P19956 98 aa2.9□□□□□ -1.94
PTR3YFR029W YER187WP40102 141 aa2.9□□□□□ -1.94
PTR3YFR029W MPC1P53157 130 aaKnown RBP2.9□□□□□ -1.94
PTR3YFR029W YLR296WQ05898 108 aa2.9□□□□□ -1.94
PTR3YFR029W FMT1P32785 401 aa2.9□□□□□ -1.95
PTR3YFR029W PAU24P38155 120 aa2.9□□□□□ -1.95
PTR3YFR029W CWP2P43497 92 aa2.9□□□□□ -1.95
PTR3YFR029W TY1B-NL2Q99337 1749 aaKnown RBP2.89□□□□□ -1.95
PTR3YFR029W SRB8P25648 1427 aa2.89□□□□□ -1.95
PTR3YFR029W RPL33BP41056 107 aaKnown RBP2.89□□□□□ -1.95
PTR3YFR029W YGL260WP53056 76 aa2.89□□□□□ -1.95
PTR3YFR029W ATP19P81451 68 aa2.89□□□□□ -1.95
PTR3YFR029W ELP6Q04868 273 aa2.89□□□□□ -1.95
PTR3YFR029W CMC4Q3E7A9 73 aa2.89□□□□□ -1.95
PTR3YFR029W COA6Q3E846 104 aa2.89□□□□□ -1.95
PTR3YFR029W PAU21P0CE86 164 aa2.88□□□□□ -1.95
PTR3YFR029W PAU22P0CE87 164 aa2.88□□□□□ -1.95
PTR3YFR029W UTR5P32630 166 aa2.88□□□□□ -1.95
PTR3YFR029W LSM2P38203 95 aaKnown RBP2.88□□□□□ -1.95
PTR3YFR029W YGR269WP40326 108 aa2.88□□□□□ -1.95
PTR3YFR029W NMA1Q06178 401 aaKnown RBP2.88□□□□□ -1.95
PTR3YFR029W FPR1P20081 114 aaKnown RBP2.87□□□□□ -1.95
PTR3YFR029W YKR045CP36138 183 aa2.87□□□□□ -1.95
PTR3YFR029W YHL018WP38744 120 aaPredicted RBP2.87□□□□□ -1.95
PTR3YFR029W YFL051CP43552 160 aa2.87□□□□□ -1.95
PTR3YFR029W DCV1P43595 202 aa2.87□□□□□ -1.95
PTR3YFR029W HUR1P45820 110 aa2.87□□□□□ -1.95
PTR3YFR029W YML079WQ03629 201 aa2.87□□□□□ -1.95
PTR3YFR029W YPL261CQ08976 102 aa2.87□□□□□ -1.95
PTR3YFR029W YRF1-2P40105 1681 aa2.87□□□□□ -1.95
PTR3YFR029W PDR12Q02785 1511 aa2.87□□□□□ -1.95
PTR3YFR029W IQG1Q12280 1495 aa2.87□□□□□ -1.95
PTR3YFR029W RTC6O14464 93 aa2.86□□□□□ -1.95
PTR3YFR029W RPS19AP07280 144 aaKnown RBP2.86□□□□□ -1.95
PTR3YFR029W RPS19BP07281 144 aaPredicted RBP2.86□□□□□ -1.95
PTR3YFR029W BRP1P53194 125 aa2.86□□□□□ -1.95
PTR3YFR029W YIL014C-AQ02598 104 aa2.86□□□□□ -1.95
PTR3YFR029W CYB5P40312 120 aa2.86□□□□□ -1.95
PTR3YFR029W YGL149WP53116 101 aa2.86□□□□□ -1.95
PTR3YFR029W YDR042CQ03205 200 aa2.86□□□□□ -1.95
PTR3YFR029W MIX14Q04341 121 aa2.86□□□□□ -1.95
PTR3YFR029W PAU19P0CE85 124 aa2.85□□□□□ -1.95
PTR3YFR029W HSP26P15992 214 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
PTR3YFR029W PAU3P25610 124 aa2.85□□□□□ -1.95
PTR3YFR029W YBR013CP38215 129 aa2.85□□□□□ -1.95
PTR3YFR029W YFL065CP43539 102 aa2.85□□□□□ -1.95
PTR3YFR029W FIT2Q08906 153 aa2.85□□□□□ -1.95
PTR3YFR029W YPR203WQ08994 102 aa2.85□□□□□ -1.95
PTR3YFR029W POC4Q12245 148 aaPredicted RBP2.85□□□□□ -1.95
PTR3YFR029W COX8P04039 78 aa2.85□□□□□ -1.95
PTR3YFR029W FUN14P18411 198 aa2.85□□□□□ -1.95
PTR3YFR029W HSP10P38910 106 aa2.85□□□□□ -1.95
PTR3YFR029W YPR153WQ06537 140 aa2.85□□□□□ -1.95
PTR3YFR029W YIR020CP40575 100 aa2.84□□□□□ -1.95
PTR3YFR029W YJR146WP47174 117 aa2.84□□□□□ -1.95
PTR3YFR029W DAD1Q12248 94 aa2.84□□□□□ -1.95
PTR3YFR029W MMS1Q06211 1407 aa2.83□□□□□ -1.96
PTR3YFR029W SEC11P15367 167 aa2.83□□□□□ -1.96
PTR3YFR029W UTH1P36135 365 aa2.83□□□□□ -1.96
PTR3YFR029W CIS3P47001 227 aa2.83□□□□□ -1.96
PTR3YFR029W DAD4P69851 72 aa2.83□□□□□ -1.96
PTR3YFR029W AVO2Q04749 426 aa2.83□□□□□ -1.96
PTR3YFR029W TMC1Q08422 150 aaPredicted RBP2.83□□□□□ -1.96
PTR3YFR029W YHR213WP0CI67 198 aa2.83□□□□□ -1.96
PTR3YFR029W DAN1P47178 298 aa2.83□□□□□ -1.96
PTR3YFR029W YHR213W-AQ8TGT4 77 aa2.83□□□□□ -1.96
PTR3YFR029W OST5Q92316 86 aa2.83□□□□□ -1.96
PTR3YFR029W PDR5P33302 1511 aaKnown RBP2.83□□□□□ -1.96
PTR3YFR029W LAA1P39526 2014 aa2.82□□□□□ -1.96
PTR3YFR029W HSP150P32478 413 aa2.82□□□□□ -1.96
PTR3YFR029W PCC1Q3E833 88 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms