RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YNL277W-AQ3E7Z0 62 aa0.03□□□□□ -2.4
LOC1YFR001W TAO3P40468 2376 aa0.03□□□□□ -2.41
LOC1YFR001W SEC59P20048 519 aa0.02□□□□□ -2.41
LOC1YFR001W YOL164W-AQ3E7A5 60 aa0.02□□□□□ -2.41
LOC1YFR001W TRM732Q03496 1420 aa0.01□□□□□ -2.41
LOC1YFR001W QCR6P00127 147 aa0□□□□□ -2.41
LOC1YFR001W HYM1P32464 399 aa0□□□□□ -2.41
LOC1YFR001W GIM4P40005 111 aaKnown RBP0□□□□□ -2.41
LOC1YFR001W YIL014C-AQ02598 104 aa0□□□□□ -2.41
LOC1YFR001W YGL041C-BQ3E750 60 aa0□□□□□ -2.41
LOC1YFR001W SEC7P11075 2009 aaKnown RBP-0.01□□□□□ -2.41
LOC1YFR001W YJL197C-AP0C5P0 93 aa-0.03□□□□□ -2.41
LOC1YFR001W YKL044WP36092 106 aa-0.04□□□□□ -2.42
LOC1YFR001W RPS20P38701 121 aaKnown RBP-0.04□□□□□ -2.42
LOC1YFR001W CYB5P40312 120 aa-0.04□□□□□ -2.42
LOC1YFR001W SFT1P43682 97 aa-0.04□□□□□ -2.42
LOC1YFR001W GPI19Q04082 140 aa-0.04□□□□□ -2.42
LOC1YFR001W YLR285C-AQ3E771 56 aa-0.04□□□□□ -2.42
LOC1YFR001W Q0144Q9ZZW2 109 aa-0.04□□□□□ -2.42
LOC1YFR001W TY4B-HP0C2J7 1802 aa-0.04□□□□□ -2.42
LOC1YFR001W GAT4P40569 121 aa-0.05□□□□□ -2.42
LOC1YFR001W URB1P34241 1764 aaKnown RBP-0.05□□□□□ -2.42
LOC1YFR001W YHR173CP38864 112 aa-0.06□□□□□ -2.42
LOC1YFR001W YOR376W-AQ3E805 51 aa-0.06□□□□□ -2.42
LOC1YFR001W CYC2P38909 366 aa-0.07□□□□□ -2.42
LOC1YFR001W YDR278CQ05612 105 aa-0.07□□□□□ -2.42
LOC1YFR001W YRF1-6P53819 1859 aa-0.07□□□□□ -2.42
LOC1YFR001W VPS55P47111 140 aa-0.08□□□□□ -2.42
LOC1YFR001W PAU12P53343 120 aa-0.08□□□□□ -2.42
LOC1YFR001W MRPS12P53732 153 aa-0.08□□□□□ -2.42
LOC1YFR001W YBR072C-AQ3E794 53 aa-0.08□□□□□ -2.42
LOC1YFR001W SLO1Q3E784 85 aa-0.09□□□□□ -2.42
LOC1YFR001W SNF11P38956 169 aa-0.1□□□□□ -2.43
LOC1YFR001W CNL1Q06333 122 aa-0.1□□□□□ -2.43
LOC1YFR001W COX23P38824 151 aa-0.11□□□□□ -2.43
LOC1YFR001W TIM8P57744 87 aa-0.11□□□□□ -2.43
LOC1YFR001W SAE3P89114 91 aa-0.11□□□□□ -2.43
LOC1YFR001W ECM5Q03214 1411 aa-0.12□□□□□ -2.43
LOC1YFR001W OST5Q92316 86 aa-0.12□□□□□ -2.43
LOC1YFR001W POL2P21951 2222 aaKnown RBP-0.12□□□□□ -2.43
LOC1YFR001W YPK9Q12697 1472 aa-0.13□□□□□ -2.43
LOC1YFR001W YLR361C-AQ3E795 98 aa-0.13□□□□□ -2.43
LOC1YFR001W YHR130CP38834 111 aa-0.14□□□□□ -2.43
LOC1YFR001W YPL261CQ08976 102 aa-0.14□□□□□ -2.43
LOC1YFR001W PCC1Q3E833 88 aa-0.14□□□□□ -2.43
LOC1YFR001W YLR363W-AQ3E747 85 aa-0.15□□□□□ -2.43
LOC1YFR001W RPA12P32529 125 aaKnown RBP-0.16□□□□□ -2.44
LOC1YFR001W RPL22BP56628 122 aaKnown RBP-0.16□□□□□ -2.44
LOC1YFR001W FRQ1Q06389 190 aa-0.16□□□□□ -2.44
LOC1YFR001W DNA2P38859 1522 aa-0.17□□□□□ -2.44
LOC1YFR001W HMRA2P0CY13 119 aa-0.17□□□□□ -2.44
LOC1YFR001W ACP1P32463 125 aa-0.17□□□□□ -2.44
LOC1YFR001W YGL204CP53089 101 aa-0.17□□□□□ -2.44
LOC1YFR001W POP7P38291 140 aa-0.18□□□□□ -2.44
LOC1YFR001W GCV3P39726 170 aaPredicted RBP-0.18□□□□□ -2.44
LOC1YFR001W SPC24Q04477 213 aa-0.18□□□□□ -2.44
LOC1YFR001W YLR255CO13574 117 aa-0.19□□□□□ -2.44
LOC1YFR001W YGR042WP53227 271 aa-0.19□□□□□ -2.44
LOC1YFR001W YNL190WP53872 204 aa-0.19□□□□□ -2.44
LOC1YFR001W NKP2Q06162 153 aa-0.19□□□□□ -2.44
LOC1YFR001W TDA2P40045 126 aa-0.2□□□□□ -2.44
LOC1YFR001W YIR020CP40575 100 aa-0.2□□□□□ -2.44
LOC1YFR001W SNN1P48232 102 aa-0.2□□□□□ -2.44
LOC1YFR001W PAU24P38155 120 aa-0.21□□□□□ -2.44
LOC1YFR001W MYO2P19524 1574 aaKnown RBP-0.22□□□□□ -2.44
LOC1YFR001W CCW14O13547 238 aa-0.23□□□□□ -2.45
LOC1YFR001W MRP49P32388 137 aa-0.23□□□□□ -2.45
LOC1YFR001W PAU2P32612 120 aa-0.23□□□□□ -2.45
LOC1YFR001W YER187WP40102 141 aa-0.23□□□□□ -2.45
LOC1YFR001W YBR056W-AI2HB52 66 aa-0.24□□□□□ -2.45
LOC1YFR001W DYN2Q02647 92 aa-0.24□□□□□ -2.45
LOC1YFR001W SHU1P38751 150 aa-0.25□□□□□ -2.45
LOC1YFR001W YIL086CP40503 102 aa-0.25□□□□□ -2.45
LOC1YFR001W DAD1Q12248 94 aa-0.25□□□□□ -2.45
LOC1YFR001W ADK1P07170 222 aaKnown RBP-0.27□□□□□ -2.45
LOC1YFR001W RAD50P12753 1312 aa-0.28□□□□□ -2.45
LOC1YFR001W YCR099CP25657 155 aa-0.28□□□□□ -2.45
LOC1YFR001W RPB11P38902 120 aa-0.28□□□□□ -2.45
LOC1YFR001W YLR118CQ12354 227 aa-0.28□□□□□ -2.45
LOC1YFR001W YCL048W-AQ2V2Q2 79 aa-0.28□□□□□ -2.45
LOC1YFR001W PAU19P0CE85 124 aa-0.29□□□□□ -2.46
LOC1YFR001W PAU3P25610 124 aa-0.29□□□□□ -2.46
LOC1YFR001W AIM11P87275 137 aa-0.29□□□□□ -2.46
LOC1YFR001W LSM6Q06406 86 aaKnown RBP-0.3□□□□□ -2.46
LOC1YFR001W YOR097CQ12274 175 aaPredicted RBP-0.3□□□□□ -2.46
LOC1YFR001W YLR099W-AQ3E798 87 aa-0.3□□□□□ -2.46
LOC1YFR001W TOP2P06786 1428 aaKnown RBP-0.3□□□□□ -2.46
LOC1YFR001W IMP2P46972 177 aa-0.31□□□□□ -2.46
LOC1YFR001W GTT1P40582 234 aa-0.32□□□□□ -2.46
LOC1YFR001W PAM16P42949 149 aa-0.32□□□□□ -2.46
LOC1YFR001W MPC2P38857 129 aa-0.33□□□□□ -2.46
LOC1YFR001W VMA7P39111 118 aa-0.33□□□□□ -2.46
LOC1YFR001W YAR029WP39549 74 aa-0.33□□□□□ -2.46
LOC1YFR001W SPC2Q04969 178 aa-0.33□□□□□ -2.46
LOC1YFR001W COX19Q3E731 98 aa-0.33□□□□□ -2.46
LOC1YFR001W RIM15P43565 1770 aa-0.33□□□□□ -2.46
LOC1YFR001W RUB1Q03919 77 aa-0.34□□□□□ -2.46
LOC1YFR001W YOL118CQ08259 102 aa-0.34□□□□□ -2.46
LOC1YFR001W YLR365WQ7LIF2 110 aa-0.34□□□□□ -2.46
LOC1YFR001W RPS11AP0CX47 156 aaKnown RBP-0.36□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms