RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YEL008WP40001 126 aa0.65□□□□□ -2.31
SWI4YER111C MPC1P53157 130 aaKnown RBP0.65□□□□□ -2.31
SWI4YER111C SDH7Q04401 133 aa0.65□□□□□ -2.31
SWI4YER111C VAM10Q08474 114 aa0.65□□□□□ -2.31
SWI4YER111C HUT1Q12520 339 aa0.65□□□□□ -2.31
SWI4YER111C TAR1Q8TGM6 124 aa0.65□□□□□ -2.31
SWI4YER111C DIE2P50076 525 aa0.65□□□□□ -2.31
SWI4YER111C IGO1P53897 168 aa0.65□□□□□ -2.31
SWI4YER111C DYN2Q02647 92 aa0.65□□□□□ -2.31
SWI4YER111C MZM1Q03429 123 aaPredicted RBP0.65□□□□□ -2.31
SWI4YER111C SOM1Q05676 74 aa0.65□□□□□ -2.31
SWI4YER111C INO4P13902 151 aa0.64□□□□□ -2.31
SWI4YER111C RPC19P28000 142 aaKnown RBP0.64□□□□□ -2.31
SWI4YER111C IPT1P38954 527 aa0.64□□□□□ -2.31
SWI4YER111C HPM1P40481 377 aa0.64□□□□□ -2.31
SWI4YER111C FIT1Q04433 528 aa0.64□□□□□ -2.31
SWI4YER111C YMR252CQ04814 134 aa0.64□□□□□ -2.31
SWI4YER111C CNL1Q06333 122 aa0.64□□□□□ -2.31
SWI4YER111C YHR212W-AP0CX91 67 aa0.64□□□□□ -2.31
SWI4YER111C ECM31P38122 312 aa0.64□□□□□ -2.31
SWI4YER111C SFT2P38166 215 aa0.64□□□□□ -2.31
SWI4YER111C GAT4P40569 121 aa0.64□□□□□ -2.31
SWI4YER111C GLC8P41818 229 aa0.64□□□□□ -2.31
SWI4YER111C SFT1P43682 97 aa0.64□□□□□ -2.31
SWI4YER111C TMA23Q03525 211 aa0.64□□□□□ -2.31
SWI4YER111C ATP14Q12349 124 aa0.64□□□□□ -2.31
SWI4YER111C CMC4Q3E7A9 73 aa0.64□□□□□ -2.31
SWI4YER111C Q0144Q9ZZW2 109 aa0.64□□□□□ -2.31
SWI4YER111C YFL051CP43552 160 aa0.63□□□□□ -2.31
SWI4YER111C APS3P47064 194 aa0.63□□□□□ -2.31
SWI4YER111C LSM8P47093 109 aaKnown RBP0.63□□□□□ -2.31
SWI4YER111C YGR017WP53210 297 aa0.63□□□□□ -2.31
SWI4YER111C TIM8P57744 87 aa0.63□□□□□ -2.31
SWI4YER111C YOR385WQ08909 290 aa0.63□□□□□ -2.31
SWI4YER111C COA3Q3E7B2 85 aa0.63□□□□□ -2.31
SWI4YER111C SCS22Q6Q595 175 aa0.63□□□□□ -2.31
SWI4YER111C HYP2P23301 157 aaKnown RBP0.63□□□□□ -2.31
SWI4YER111C YHL042WP38729 150 aa0.63□□□□□ -2.31
SWI4YER111C PHS1P40857 217 aa0.63□□□□□ -2.31
SWI4YER111C YAE1P47118 141 aaPredicted RBP0.63□□□□□ -2.31
SWI4YER111C MRPL44P19956 98 aa0.63□□□□□ -2.31
SWI4YER111C RPS1BP23248 255 aaKnown RBP0.63□□□□□ -2.31
SWI4YER111C SRL3P36167 246 aa0.63□□□□□ -2.31
SWI4YER111C BRP1P53194 125 aa0.63□□□□□ -2.31
SWI4YER111C GPI11Q06636 219 aa0.63□□□□□ -2.31
SWI4YER111C RAD50P12753 1312 aa0.63□□□□□ -2.31
SWI4YER111C FAS1P07149 2051 aaKnown RBP0.62□□□□□ -2.31
SWI4YER111C QCR10P37299 77 aa0.62□□□□□ -2.31
SWI4YER111C AIM11P87275 137 aa0.62□□□□□ -2.31
SWI4YER111C SED1Q01589 338 aa0.62□□□□□ -2.31
SWI4YER111C YPR117WQ06116 2489 aa0.62□□□□□ -2.31
SWI4YER111C YKR070WP36151 352 aaKnown RBP0.62□□□□□ -2.31
SWI4YER111C YFL065CP43539 102 aa0.62□□□□□ -2.31
SWI4YER111C COX5BP00425 151 aa0.62□□□□□ -2.31
SWI4YER111C KIN28P06242 306 aa0.62□□□□□ -2.31
SWI4YER111C YCR050CP25630 102 aa0.62□□□□□ -2.31
SWI4YER111C YBR027CP38220 110 aa0.62□□□□□ -2.31
SWI4YER111C ELC1Q03071 99 aa0.62□□□□□ -2.31
SWI4YER111C YIR021W-AQ3E739 70 aa0.62□□□□□ -2.31
SWI4YER111C FYV5P25585 152 aa0.61□□□□□ -2.31
SWI4YER111C RPL14AP36105 138 aaKnown RBP0.61□□□□□ -2.31
SWI4YER111C MRPL15P36523 253 aa0.61□□□□□ -2.31
SWI4YER111C RPL14BP38754 138 aaKnown RBP0.61□□□□□ -2.31
SWI4YER111C VMA7P39111 118 aa0.61□□□□□ -2.31
SWI4YER111C NKP2Q06162 153 aa0.61□□□□□ -2.31
SWI4YER111C FRQ1Q06389 190 aa0.61□□□□□ -2.31
SWI4YER111C ANB1P19211 157 aa0.61□□□□□ -2.31
SWI4YER111C DCV1P43595 202 aa0.61□□□□□ -2.31
SWI4YER111C AIM36Q03798 255 aa0.61□□□□□ -2.31
SWI4YER111C NAT5Q08689 176 aa0.61□□□□□ -2.31
SWI4YER111C LAA1P39526 2014 aa0.61□□□□□ -2.31
SWI4YER111C TRS20P38334 175 aa0.6□□□□□ -2.31
SWI4YER111C YAR064WP39563 99 aa0.6□□□□□ -2.31
SWI4YER111C YNL122CP53921 115 aaPredicted RBP0.6□□□□□ -2.31
SWI4YER111C YLR118CQ12354 227 aa0.6□□□□□ -2.31
SWI4YER111C PFY1P07274 126 aa0.6□□□□□ -2.31
SWI4YER111C NMT1P14743 455 aa0.6□□□□□ -2.31
SWI4YER111C RPS1AP33442 255 aaKnown RBP0.6□□□□□ -2.31
SWI4YER111C YBR242WP38331 238 aa0.6□□□□□ -2.31
SWI4YER111C HUA1P40325 198 aa0.6□□□□□ -2.31
SWI4YER111C MYO1P08964 1928 aa0.6□□□□□ -2.31
SWI4YER111C PAU21P0CE86 164 aa0.6□□□□□ -2.31
SWI4YER111C PAU22P0CE87 164 aa0.6□□□□□ -2.31
SWI4YER111C YHL037CP38733 133 aa0.6□□□□□ -2.31
SWI4YER111C LST8P41318 303 aa0.6□□□□□ -2.31
SWI4YER111C YGL230CP53074 147 aa0.6□□□□□ -2.31
SWI4YER111C TVP18Q04767 167 aa0.6□□□□□ -2.31
SWI4YER111C KTI11Q3E840 82 aa0.6□□□□□ -2.31
SWI4YER111C VMA10P48836 114 aaKnown RBP0.59□□□□□ -2.31
SWI4YER111C YJL197C-AP0C5P0 93 aa0.59□□□□□ -2.32
SWI4YER111C AQY2P0CD90 149 aa0.59□□□□□ -2.32
SWI4YER111C MRP49P32388 137 aa0.59□□□□□ -2.32
SWI4YER111C YAL064WP39711 94 aa0.59□□□□□ -2.32
SWI4YER111C YCL001W-AP87012 153 aa0.59□□□□□ -2.32
SWI4YER111C YLR296WQ05898 108 aa0.59□□□□□ -2.32
SWI4YER111C RTC6O14464 93 aa0.58□□□□□ -2.32
SWI4YER111C RPL43AP0CX25 92 aaKnown RBP0.58□□□□□ -2.32
SWI4YER111C RPL43BP0CX26 92 aa0.58□□□□□ -2.32
SWI4YER111C APS2Q00381 147 aa0.58□□□□□ -2.32
SWI4YER111C YMR007WQ03675 126 aa0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms