RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YER076CP40049 302 aa1.79□□□□□ -2.12
SSD1YDR293C BRP1P53194 125 aa1.79□□□□□ -2.12
SSD1YDR293C FSF1Q12029 327 aaKnown RBP1.79□□□□□ -2.12
SSD1YDR293C FCY1Q12178 158 aa1.79□□□□□ -2.12
SSD1YDR293C YOR192C-CQ3E736 78 aa1.79□□□□□ -2.12
SSD1YDR293C VAR1P02381 398 aa1.79□□□□□ -2.12
SSD1YDR293C YER181CP40097 107 aa1.79□□□□□ -2.12
SSD1YDR293C YFL015CP43578 164 aa1.79□□□□□ -2.12
SSD1YDR293C IMP2P46972 177 aa1.79□□□□□ -2.12
SSD1YDR293C SPG4Q04438 115 aa1.79□□□□□ -2.12
SSD1YDR293C YDL157CQ12082 118 aa1.79□□□□□ -2.12
SSD1YDR293C FOL3Q12676 427 aaPredicted RBP1.79□□□□□ -2.12
SSD1YDR293C FAS1P07149 2051 aaKnown RBP1.79□□□□□ -2.12
SSD1YDR293C VPS13Q07878 3144 aa1.79□□□□□ -2.12
SSD1YDR293C NHP2P32495 156 aaPredicted RBP1.79□□□□□ -2.12
SSD1YDR293C YNL092WP53934 400 aa1.79□□□□□ -2.12
SSD1YDR293C SNA4Q07549 140 aa1.79□□□□□ -2.12
SSD1YDR293C DFM1Q12743 341 aaKnown RBP1.79□□□□□ -2.12
SSD1YDR293C FAB1P34756 2278 aa1.78□□□□□ -2.12
SSD1YDR293C RPL23AP0CX41 137 aaKnown RBP1.78□□□□□ -2.12
SSD1YDR293C RPL23BP0CX42 137 aaKnown RBP1.78□□□□□ -2.12
SSD1YDR293C ELC1Q03071 99 aa1.78□□□□□ -2.12
SSD1YDR293C YDL241WQ07738 123 aa1.78□□□□□ -2.12
SSD1YDR293C YLR042CQ07990 161 aa1.78□□□□□ -2.12
SSD1YDR293C NCE102Q12207 173 aaRIP-Chip data1.78□□□□□ -2.12not detected
SSD1YDR293C YGR240C-AQ3E786 66 aa1.78□□□□□ -2.12
SSD1YDR293C YIR020CP40575 100 aa1.78□□□□□ -2.12
SSD1YDR293C POP3P53833 195 aaPredicted RBP1.78□□□□□ -2.12
SSD1YDR293C MHR1Q06630 226 aa1.78□□□□□ -2.12
SSD1YDR293C YCR024C-BQ3E7Z8 88 aa1.78□□□□□ -2.12
SSD1YDR293C RPP2AP05319 106 aaKnown RBP1.78□□□□□ -2.13
SSD1YDR293C ERG28P40030 148 aa1.78□□□□□ -2.13
SSD1YDR293C YER134CP40081 178 aa1.78□□□□□ -2.13
SSD1YDR293C RPL2AP0CX45 254 aaKnown RBP1.77□□□□□ -2.13
SSD1YDR293C RPL2BP0CX46 254 aaKnown RBP1.77□□□□□ -2.13
SSD1YDR293C MRS3P10566 314 aa1.77□□□□□ -2.13
SSD1YDR293C SPS100P13130 326 aa1.77□□□□□ -2.13
SSD1YDR293C ARO2P28777 376 aaKnown RBP1.77□□□□□ -2.13
SSD1YDR293C YHR130CP38834 111 aa1.77□□□□□ -2.13
SSD1YDR293C MPC2P38857 129 aa1.77□□□□□ -2.13
SSD1YDR293C YJL027CP47063 138 aaPredicted RBP1.77□□□□□ -2.13
SSD1YDR293C ALG13P53178 202 aa1.77□□□□□ -2.13
SSD1YDR293C PMP3P87284 55 aa1.77□□□□□ -2.13
SSD1YDR293C HOR7Q05827 59 aa1.77□□□□□ -2.13
SSD1YDR293C YPR170W-BP0C5R9 85 aa1.77□□□□□ -2.13
SSD1YDR293C CUP2P15315 225 aa1.77□□□□□ -2.13
SSD1YDR293C YKR041WP36134 250 aa1.77□□□□□ -2.13
SSD1YDR293C SFT1P43682 97 aa1.77□□□□□ -2.13
SSD1YDR293C RAV2Q03956 351 aa1.77□□□□□ -2.13
SSD1YDR293C YOL118CQ08259 102 aa1.77□□□□□ -2.13
SSD1YDR293C JID1Q12350 301 aa1.77□□□□□ -2.13
SSD1YDR293C YKL070WP36087 169 aa1.77□□□□□ -2.13
SSD1YDR293C ECM33P38248 429 aaKnown RBP1.77□□□□□ -2.13
SSD1YDR293C YHR022CP38763 256 aa1.77□□□□□ -2.13
SSD1YDR293C YAR1P46683 200 aa1.77□□□□□ -2.13
SSD1YDR293C NAT5Q08689 176 aa1.77□□□□□ -2.13
SSD1YDR293C SAL1D6W196 494 aa1.76□□□□□ -2.13
SSD1YDR293C MBF1O14467 151 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C RPL39P04650 51 aa1.76□□□□□ -2.13
SSD1YDR293C RPS11AP0CX47 156 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C RPS11BP0CX48 156 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C RPL18AP0CX49 186 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C RPL18BP0CX50 186 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C KTI12P34253 313 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C ECM14P38836 430 aa1.76□□□□□ -2.13
SSD1YDR293C YIL163CP40448 117 aa1.76□□□□□ -2.13
SSD1YDR293C VPS55P47111 140 aa1.76□□□□□ -2.13
SSD1YDR293C YHP1Q04116 353 aa1.76□□□□□ -2.13
SSD1YDR293C YTH1Q06102 208 aaPredicted RBP1.76□□□□□ -2.13
SSD1YDR293C PBP4Q07362 185 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C RNH203Q12338 110 aa1.76□□□□□ -2.13
SSD1YDR293C BRR2P32639 2163 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C YMR316C-AI2HB70 103 aa1.76□□□□□ -2.13
SSD1YDR293C PAM17P36147 197 aa1.76□□□□□ -2.13
SSD1YDR293C YMR317WQ04893 1140 aa1.76□□□□□ -2.13
SSD1YDR293C YLR194CQ05777 254 aa1.76□□□□□ -2.13
SSD1YDR293C CYR1P08678 2026 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C LSM6Q06406 86 aaKnown RBP1.76□□□□□ -2.13
SSD1YDR293C YFL051CP43552 160 aa1.75□□□□□ -2.13
SSD1YDR293C YMR103CQ04436 120 aa1.75□□□□□ -2.13
SSD1YDR293C YLR112WQ12130 139 aa1.75□□□□□ -2.13
SSD1YDR293C RDL1Q12305 139 aaKnown RBP1.75□□□□□ -2.13
SSD1YDR293C NRG2P38082 220 aa1.75□□□□□ -2.13
SSD1YDR293C LSM2P38203 95 aaKnown RBP1.75□□□□□ -2.13
SSD1YDR293C DCV1P43595 202 aa1.75□□□□□ -2.13
SSD1YDR293C YJL028WP47062 111 aa1.75□□□□□ -2.13
SSD1YDR293C SRL1Q08673 210 aa1.75□□□□□ -2.13
SSD1YDR293C YCL048W-AQ2V2Q2 79 aa1.75□□□□□ -2.13
SSD1YDR293C YMR175W-AQ3E766 64 aa1.75□□□□□ -2.13
SSD1YDR293C COX10P21592 462 aa1.75□□□□□ -2.13
SSD1YDR293C SPC1P46965 94 aa1.75□□□□□ -2.13
SSD1YDR293C TOS8P53147 276 aa1.75□□□□□ -2.13
SSD1YDR293C ATO3Q12359 275 aa1.75□□□□□ -2.13
SSD1YDR293C YPR014CQ6B0W2 109 aa1.75□□□□□ -2.13
SSD1YDR293C ENV10Q99382 181 aa1.75□□□□□ -2.13
SSD1YDR293C RPB9P27999 122 aa1.74□□□□□ -2.13
SSD1YDR293C YCR041WP37265 110 aa1.74□□□□□ -2.13
SSD1YDR293C SIM1P40472 476 aa1.74□□□□□ -2.13
SSD1YDR293C YPL261CQ08976 102 aa1.74□□□□□ -2.13
SSD1YDR293C YOR097CQ12274 175 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms