RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C HTL1Q9URQ5 78 aa3.48□□□□□ -1.85
NUP42YDR192C Q0297Q9ZZV8 51 aa3.48□□□□□ -1.85
NUP42YDR192C CPT1P17898 393 aa3.47□□□□□ -1.85
NUP42YDR192C INO2P26798 304 aa3.47□□□□□ -1.85
NUP42YDR192C SSS1P35179 80 aa3.47□□□□□ -1.85
NUP42YDR192C YKR045CP36138 183 aa3.47□□□□□ -1.85
NUP42YDR192C YGR018CP53211 109 aa3.47□□□□□ -1.85
NUP42YDR192C YGR219WP53307 113 aa3.47□□□□□ -1.85
NUP42YDR192C DXO1Q06349 442 aa3.47□□□□□ -1.85
NUP42YDR192C FCY1Q12178 158 aa3.47□□□□□ -1.85
NUP42YDR192C YNR034W-AQ3E841 98 aa3.47□□□□□ -1.85
NUP42YDR192C ADH1P00330 348 aaKnown RBP3.46□□□□□ -1.86
NUP42YDR192C SMP1P38128 452 aa3.46□□□□□ -1.86
NUP42YDR192C RRT13P40042 185 aa3.46□□□□□ -1.86
NUP42YDR192C DAD4P69851 72 aa3.46□□□□□ -1.86
NUP42YDR192C ARL3Q02804 198 aa3.46□□□□□ -1.86
NUP42YDR192C CUE4Q04201 117 aaPredicted RBP3.46□□□□□ -1.86
NUP42YDR192C HOR7Q05827 59 aa3.46□□□□□ -1.86
NUP42YDR192C YPR063CQ12160 140 aa3.46□□□□□ -1.86
NUP42YDR192C YCL001W-BQ96VH2 84 aa3.46□□□□□ -1.86
NUP42YDR192C YHR213WP0CI67 198 aa3.45□□□□□ -1.86
NUP42YDR192C MRPL28P36527 147 aa3.45□□□□□ -1.86
NUP42YDR192C YFR045WP43617 309 aa3.45□□□□□ -1.86
NUP42YDR192C VPS55P47111 140 aa3.45□□□□□ -1.86
NUP42YDR192C YGL118CP53132 145 aa3.45□□□□□ -1.86
NUP42YDR192C LSO2Q3E772 92 aaKnown RBP3.45□□□□□ -1.86
NUP42YDR192C YLR342W-AQ3E810 57 aa3.45□□□□□ -1.86
NUP42YDR192C RPL27AP0C2H6 136 aaKnown RBP3.44□□□□□ -1.86
NUP42YDR192C RPL31AP0C2H8 113 aaKnown RBP3.44□□□□□ -1.86
NUP42YDR192C YBR013CP38215 129 aa3.44□□□□□ -1.86
NUP42YDR192C SEC72P39742 193 aaKnown RBP3.44□□□□□ -1.86
NUP42YDR192C YIA6P40556 373 aa3.44□□□□□ -1.86
NUP42YDR192C TOS8P53147 276 aa3.44□□□□□ -1.86
NUP42YDR192C DIA1P54005 336 aa3.44□□□□□ -1.86
NUP42YDR192C YMR166CQ03829 368 aa3.44□□□□□ -1.86
NUP42YDR192C WIP1Q2V2P8 89 aa3.44□□□□□ -1.86
NUP42YDR192C PRY2P36110 329 aa3.43□□□□□ -1.86
NUP42YDR192C LSM2P38203 95 aaKnown RBP3.43□□□□□ -1.86
NUP42YDR192C POP7P38291 140 aa3.43□□□□□ -1.86
NUP42YDR192C YIL163CP40448 117 aa3.43□□□□□ -1.86
NUP42YDR192C CYT2Q00873 224 aa3.43□□□□□ -1.86
NUP42YDR192C CNL1Q06333 122 aa3.43□□□□□ -1.86
NUP42YDR192C YAL067W-AQ8TGK6 75 aa3.43□□□□□ -1.86
NUP42YDR192C RPL27BP0C2H7 136 aaKnown RBP3.42□□□□□ -1.86
NUP42YDR192C AIM29P36154 155 aa3.42□□□□□ -1.86
NUP42YDR192C YHR140WP38842 239 aa3.42□□□□□ -1.86
NUP42YDR192C SRP14P38985 146 aa3.42□□□□□ -1.86
NUP42YDR192C IMP2P46972 177 aa3.42□□□□□ -1.86
NUP42YDR192C TDA4P47153 279 aa3.42□□□□□ -1.86
NUP42YDR192C TOM7P53507 60 aa3.42□□□□□ -1.86
NUP42YDR192C RAV2Q03956 351 aa3.42□□□□□ -1.86
NUP42YDR192C FYV7Q12247 151 aa3.42□□□□□ -1.86
NUP42YDR192C TIM22Q12328 207 aa3.42□□□□□ -1.86
NUP42YDR192C YOL085CQ99345 113 aa3.42□□□□□ -1.86
NUP42YDR192C CCW14O13547 238 aa3.41□□□□□ -1.86
NUP42YDR192C POR1P04840 283 aaKnown RBP3.41□□□□□ -1.86
NUP42YDR192C MRPL31P14063 131 aaPredicted RBP3.41□□□□□ -1.86
NUP42YDR192C CUP2P15315 225 aa3.41□□□□□ -1.86
NUP42YDR192C MRPL11P36521 249 aaPredicted RBP3.41□□□□□ -1.86
NUP42YDR192C PET8P38921 284 aa3.41□□□□□ -1.86
NUP42YDR192C RPA43P46669 326 aa3.41□□□□□ -1.86
NUP42YDR192C YJL027CP47063 138 aaPredicted RBP3.41□□□□□ -1.86
NUP42YDR192C ALG13P53178 202 aa3.41□□□□□ -1.86
NUP42YDR192C THG1P53215 237 aaKnown RBP3.41□□□□□ -1.86
NUP42YDR192C YIP3P53633 176 aa3.41□□□□□ -1.86
NUP42YDR192C MRPL49P40858 161 aaPredicted RBP3.4□□□□□ -1.87
NUP42YDR192C ERV14P53173 138 aa3.4□□□□□ -1.87
NUP42YDR192C YOL160WQ08321 113 aa3.4□□□□□ -1.87
NUP42YDR192C YNL146C-AQ3E7Z1 64 aa3.4□□□□□ -1.87
NUP42YDR192C YGR035W-AQ45U48 73 aa3.4□□□□□ -1.87
NUP42YDR192C MDN1Q12019 4910 aaKnown RBP3.4□□□□□ -1.87
NUP42YDR192C FUN14P18411 198 aa3.39□□□□□ -1.87
NUP42YDR192C UTR5P32630 166 aa3.39□□□□□ -1.87
NUP42YDR192C YDR366CP87287 132 aa3.39□□□□□ -1.87
NUP42YDR192C GPI19Q04082 140 aa3.39□□□□□ -1.87
NUP42YDR192C TVP18Q04767 167 aa3.39□□□□□ -1.87
NUP42YDR192C IRC23Q08416 157 aa3.39□□□□□ -1.87
NUP42YDR192C CCW12Q12127 133 aa3.39□□□□□ -1.87
NUP42YDR192C YLR050CQ12155 161 aaKnown RBP3.39□□□□□ -1.87
NUP42YDR192C YCR075W-AQ3E830 75 aa3.39□□□□□ -1.87
NUP42YDR192C ATP5P09457 212 aa3.38□□□□□ -1.87
NUP42YDR192C MRPL44P19956 98 aa3.38□□□□□ -1.87
NUP42YDR192C YKL102CP34249 101 aa3.38□□□□□ -1.87
NUP42YDR192C MPC2P38857 129 aa3.38□□□□□ -1.87
NUP42YDR192C TEM1P38987 245 aa3.38□□□□□ -1.87
NUP42YDR192C SNU13P39990 126 aaKnown RBP3.38□□□□□ -1.87
NUP42YDR192C OST3P48439 350 aa3.38□□□□□ -1.87
NUP42YDR192C ARC18Q05933 178 aaKnown RBP3.38□□□□□ -1.87
NUP42YDR192C ATG39Q06159 398 aa3.38□□□□□ -1.87
NUP42YDR192C DFM1Q12743 341 aaKnown RBP3.38□□□□□ -1.87
NUP42YDR192C YDL085C-AQ3E7B7 68 aaKnown RBP3.38□□□□□ -1.87
NUP42YDR192C FZF1P32805 299 aa3.37□□□□□ -1.87
NUP42YDR192C PAU16P35994 123 aa3.37□□□□□ -1.87
NUP42YDR192C PAM17P36147 197 aa3.37□□□□□ -1.87
NUP42YDR192C SAE3P89114 91 aa3.37□□□□□ -1.87
NUP42YDR192C FSF1Q12029 327 aaKnown RBP3.37□□□□□ -1.87
NUP42YDR192C YOR011W-AQ3E807 68 aa3.37□□□□□ -1.87
NUP42YDR192C APS1P35181 156 aa3.36□□□□□ -1.87
NUP42YDR192C ECM33P38248 429 aaKnown RBP3.36□□□□□ -1.87
NUP42YDR192C AGE2P40529 298 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms