RNA–Protein interactions for RNA: YDL217C

TIM22, Transcript of Essential core component of the mitochondrial TIM22 complex, yeast

Gene TIM22, Length 624 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM22	YDL217C	YNL234W	P53857	426 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	YPR108W-A	Q3E7B3	70 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	AQY1	P0CD91	305 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	MRS3	P10566	314 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	ROX3	P25046	220 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	SRP21	P32342	167 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	ATX1	P38636	73 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	MST28	P39552	234 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	CWP2	P43497	92 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	LSM7	P53905	115 aa	Known RBP	4.87	□□□□□ -1.63
TIM22	YDL217C	YPL162C	Q12042	273 aa		4.87	□□□□□ -1.63
TIM22	YDL217C	HTD2	P38790	280 aa	Known RBP	4.86	□□□□□ -1.63
TIM22	YDL217C	GPI2	P46961	280 aa		4.86	□□□□□ -1.63
TIM22	YDL217C	BET5	Q03630	159 aa		4.86	□□□□□ -1.63
TIM22	YDL217C	YLR281C	Q05863	155 aa		4.86	□□□□□ -1.63
TIM22	YDL217C	YGL010W	P25338	174 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	MRP17	P28778	131 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	YHR140W	P38842	239 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	YAR029W	P39549	74 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	CYB5	P40312	120 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	CAX4	P53223	239 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	AVO2	Q04749	426 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	ASM4	Q05166	528 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	YOL118C	Q08259	102 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	DGA1	Q08650	418 aa		4.85	□□□□□ -1.63
TIM22	YDL217C	TRP1	P00912	224 aa		4.84	□□□□□ -1.63
TIM22	YDL217C	POR1	P04840	283 aa	Known RBP	4.84	□□□□□ -1.63
TIM22	YDL217C	ALK2	P32789	676 aa	Predicted RBP	4.84	□□□□□ -1.63
TIM22	YDL217C	IRC22	P40006	225 aa		4.84	□□□□□ -1.63
TIM22	YDL217C	ATG27	P46989	271 aa		4.84	□□□□□ -1.63
TIM22	YDL217C	AIM25	P47140	327 aa		4.84	□□□□□ -1.63
TIM22	YDL217C	YHP1	Q04116	353 aa		4.84	□□□□□ -1.63
TIM22	YDL217C	SPO13	P23624	291 aa		4.83	□□□□□ -1.64
TIM22	YDL217C	RPL14A	P36105	138 aa	Known RBP	4.83	□□□□□ -1.64
TIM22	YDL217C	MRPL27	P36526	146 aa	Predicted RBP	4.83	□□□□□ -1.64
TIM22	YDL217C	MIX23	P38162	196 aa		4.83	□□□□□ -1.64
TIM22	YDL217C	YNL198C	P40166	100 aa		4.83	□□□□□ -1.64
TIM22	YDL217C	UBP8	P50102	471 aa		4.83	□□□□□ -1.64
TIM22	YDL217C	ANT1	Q06497	328 aa		4.83	□□□□□ -1.64
TIM22	YDL217C	PAU19	P0CE85	124 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	PAU21	P0CE86	164 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	PAU22	P0CE87	164 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	KRE1	P17260	313 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	PAU3	P25610	124 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	MRPL38	P35996	138 aa	Predicted RBP	4.82	□□□□□ -1.64
TIM22	YDL217C	MPC2	P38857	129 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	GCV3	P39726	170 aa	Predicted RBP	4.82	□□□□□ -1.64
TIM22	YDL217C	HUG1	Q6Q5K6	68 aa		4.82	□□□□□ -1.64
TIM22	YDL217C	MDM10	P18409	493 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	YCR085W	P25650	117 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	APS1	P35181	156 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	MBB1	P39534	108 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	YPI1	P43587	155 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	MST27	P53176	234 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	CRH1	P53301	507 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	ARR3	Q06598	404 aa		4.81	□□□□□ -1.64
TIM22	YDL217C	CDC43	P18898	376 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	FLO5	P38894	1075 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	ADD37	Q03233	198 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	FSH2	Q05015	223 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	YOR385W	Q08909	290 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	YDL157C	Q12082	118 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	YGL258W-A	Q3E740	77 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	TSC3	Q3E790	80 aa		4.8	□□□□□ -1.64
TIM22	YDL217C	PAM17	P36147	197 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	SFT2	P38166	215 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	PEX17	P40155	199 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	LST8	P41318	303 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	TDA4	P47153	279 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	YDR274C	P87283	123 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	YLR363W-A	Q3E747	85 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	KSH1	Q8TGJ3	72 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	ENV10	Q99382	181 aa		4.79	□□□□□ -1.64
TIM22	YDL217C	YCR050C	P25630	102 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	RPL16B	P26785	198 aa	Known RBP	4.78	□□□□□ -1.64
TIM22	YDL217C	RPA12	P32529	125 aa	Known RBP	4.78	□□□□□ -1.64
TIM22	YDL217C	AGA2	P32781	87 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	MID2	P36027	376 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	YER134C	P40081	178 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	YER181C	P40097	107 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	SYM1	Q06563	197 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	TIM18	Q08749	192 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	YIL102C-A	Q2V2P5	75 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	YBR255C-A	Q3E776	120 aa		4.78	□□□□□ -1.64
TIM22	YDL217C	YKR045C	P36138	183 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	YBL081W	P38180	368 aa	Known RBP	4.77	□□□□□ -1.65
TIM22	YDL217C	RRT1	P38192	103 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	ASP1	P38986	381 aa	Predicted RBP	4.77	□□□□□ -1.65
TIM22	YDL217C	NSA2	P40078	261 aa	Known RBP	4.77	□□□□□ -1.65
TIM22	YDL217C	EMC5	P40540	141 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	WWM1	P43582	211 aa	Known RBP	4.77	□□□□□ -1.65
TIM22	YDL217C	YGL034C	P53186	121 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	YML079W	Q03629	201 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	YPL229W	Q99395	206 aa		4.77	□□□□□ -1.65
TIM22	YDL217C	SPT4	P32914	102 aa	Predicted RBP	4.76	□□□□□ -1.65
TIM22	YDL217C	RPL32	P38061	130 aa	Known RBP	4.76	□□□□□ -1.65
TIM22	YDL217C	NRG2	P38082	220 aa		4.76	□□□□□ -1.65
TIM22	YDL217C	YBL071C	P38185	102 aa		4.76	□□□□□ -1.65
TIM22	YDL217C	PHS1	P40857	217 aa		4.76	□□□□□ -1.65
TIM22	YDL217C	DSK2	P48510	373 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms