RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YMR320WQ04897 101 aa1.36□□□□□ -2.19
UBP1YDL122W ATP5P09457 212 aa1.36□□□□□ -2.19
UBP1YDL122W SHE2P36068 246 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
UBP1YDL122W POR2P40478 281 aa1.36□□□□□ -2.19
UBP1YDL122W ERJ5P43613 295 aaPredicted RBP1.36□□□□□ -2.19
UBP1YDL122W MRPS8Q03799 155 aa1.36□□□□□ -2.19
UBP1YDL122W YPR013CQ12145 317 aa1.36□□□□□ -2.19
UBP1YDL122W POR1P04840 283 aaKnown RBP1.35□□□□□ -2.19
UBP1YDL122W SCM4P32564 187 aa1.35□□□□□ -2.19
UBP1YDL122W SBH1P52870 82 aa1.35□□□□□ -2.19
UBP1YDL122W YMR295CQ03559 197 aa1.35□□□□□ -2.19
UBP1YDL122W FIT1Q04433 528 aa1.35□□□□□ -2.19
UBP1YDL122W SPC24Q04477 213 aa1.35□□□□□ -2.19
UBP1YDL122W HRD1Q08109 551 aa1.35□□□□□ -2.19
UBP1YDL122W FEX1Q08913 375 aa1.35□□□□□ -2.19
UBP1YDL122W FEX2Q08991 375 aa1.35□□□□□ -2.19
UBP1YDL122W MRS4P23500 304 aa1.35□□□□□ -2.19
UBP1YDL122W YBR013CP38215 129 aa1.35□□□□□ -2.19
UBP1YDL122W NSA2P40078 261 aaKnown RBP1.35□□□□□ -2.19
UBP1YDL122W HHO1P53551 258 aa1.35□□□□□ -2.19
UBP1YDL122W YDR366CP87287 132 aa1.35□□□□□ -2.19
UBP1YDL122W VPS28Q02767 242 aa1.35□□□□□ -2.19
UBP1YDL122W COF1Q03048 143 aaKnown RBP1.35□□□□□ -2.19
UBP1YDL122W FYV12Q08559 129 aa1.35□□□□□ -2.19
UBP1YDL122W YGR240C-AQ3E786 66 aa1.35□□□□□ -2.19
UBP1YDL122W YNL146C-AQ3E7Z1 64 aa1.35□□□□□ -2.19
UBP1YDL122W TIR1P10863 254 aa1.34□□□□□ -2.19
UBP1YDL122W GNA1P43577 159 aaPredicted RBP1.34□□□□□ -2.19
UBP1YDL122W VMA10P48836 114 aaKnown RBP1.34□□□□□ -2.19
UBP1YDL122W DOC1P53068 250 aa1.34□□□□□ -2.19
UBP1YDL122W YGL193CP53097 103 aa1.34□□□□□ -2.19
UBP1YDL122W TOM7P53507 60 aa1.34□□□□□ -2.19
UBP1YDL122W FSF1Q12029 327 aaKnown RBP1.34□□□□□ -2.19
UBP1YDL122W SOD1P00445 154 aaKnown RBP1.34□□□□□ -2.2
UBP1YDL122W RAD6P06104 172 aa1.34□□□□□ -2.2
UBP1YDL122W FYV4P38783 130 aaPredicted RBP1.34□□□□□ -2.2
UBP1YDL122W SPC25P40014 221 aa1.34□□□□□ -2.2
UBP1YDL122W YER181CP40097 107 aa1.34□□□□□ -2.2
UBP1YDL122W RPL33BP41056 107 aaKnown RBP1.34□□□□□ -2.2
UBP1YDL122W YGR039WP53225 103 aa1.34□□□□□ -2.2
UBP1YDL122W SHH3Q04487 196 aa1.34□□□□□ -2.2
UBP1YDL122W ATP14Q12349 124 aa1.34□□□□□ -2.2
UBP1YDL122W YOS1Q3E834 85 aa1.34□□□□□ -2.2
UBP1YDL122W RPL26AP05743 127 aaKnown RBP1.33□□□□□ -2.2
UBP1YDL122W KRE1P17260 313 aa1.33□□□□□ -2.2
UBP1YDL122W YKR045CP36138 183 aa1.33□□□□□ -2.2
UBP1YDL122W HTD2P38790 280 aaKnown RBP1.33□□□□□ -2.2
UBP1YDL122W RPL26BP53221 127 aaKnown RBP1.33□□□□□ -2.2
UBP1YDL122W MPC3P53311 146 aa1.33□□□□□ -2.2
UBP1YDL122W YMR253CQ04835 414 aa1.33□□□□□ -2.2
UBP1YDL122W HUT1Q12520 339 aa1.33□□□□□ -2.2
UBP1YDL122W SLO1Q3E784 85 aa1.33□□□□□ -2.2
UBP1YDL122W YPR010C-AA5Z2X5 72 aa1.32□□□□□ -2.2
UBP1YDL122W GPI2P46961 280 aa1.32□□□□□ -2.2
UBP1YDL122W SYM1Q06563 197 aa1.32□□□□□ -2.2
UBP1YDL122W IRC23Q08416 157 aa1.32□□□□□ -2.2
UBP1YDL122W ATP20Q12233 115 aa1.32□□□□□ -2.2
UBP1YDL122W SRP21P32342 167 aa1.32□□□□□ -2.2
UBP1YDL122W SPT14P32363 452 aa1.32□□□□□ -2.2
UBP1YDL122W FZF1P32805 299 aa1.32□□□□□ -2.2
UBP1YDL122W PAM17P36147 197 aa1.32□□□□□ -2.2
UBP1YDL122W YER135CP40082 130 aa1.32□□□□□ -2.2
UBP1YDL122W GLC8P41818 229 aa1.32□□□□□ -2.2
UBP1YDL122W YNR077CP53758 84 aa1.32□□□□□ -2.2
UBP1YDL122W YLR042CQ07990 161 aa1.32□□□□□ -2.2
UBP1YDL122W DDR48P18899 430 aaKnown RBP1.31□□□□□ -2.2
UBP1YDL122W RRT1P38192 103 aa1.31□□□□□ -2.2
UBP1YDL122W LST8P41318 303 aa1.31□□□□□ -2.2
UBP1YDL122W SDH7Q04401 133 aa1.31□□□□□ -2.2
UBP1YDL122W CNL1Q06333 122 aa1.31□□□□□ -2.2
UBP1YDL122W FRQ1Q06389 190 aa1.31□□□□□ -2.2
UBP1YDL122W WIP1Q2V2P8 89 aa1.31□□□□□ -2.2
UBP1YDL122W FMT1P32785 401 aa1.31□□□□□ -2.2
UBP1YDL122W MRPL24P36525 258 aaPredicted RBP1.31□□□□□ -2.2
UBP1YDL122W ERV15P38312 142 aa1.31□□□□□ -2.2
UBP1YDL122W EMC5P40540 141 aa1.31□□□□□ -2.2
UBP1YDL122W YJR146WP47174 117 aa1.31□□□□□ -2.2
UBP1YDL122W GRX5Q02784 150 aa1.31□□□□□ -2.2
UBP1YDL122W YNL217WP40152 326 aa1.3□□□□□ -2.2
UBP1YDL122W YNL033WP53964 284 aa1.3□□□□□ -2.2
UBP1YDL122W YOR011W-AQ3E807 68 aa1.3□□□□□ -2.2
UBP1YDL122W YLL066W-BQ8TGJ7 56 aa1.3□□□□□ -2.2
UBP1YDL122W YLR236CA0A023PZG4 107 aa1.3□□□□□ -2.2
UBP1YDL122W SHB17P36136 271 aaKnown RBP1.3□□□□□ -2.2
UBP1YDL122W YBR209WP38311 105 aa1.3□□□□□ -2.2
UBP1YDL122W YPT31P38555 223 aaKnown RBP1.3□□□□□ -2.2
UBP1YDL122W YJL027CP47063 138 aaPredicted RBP1.3□□□□□ -2.2
UBP1YDL122W YNL277W-AQ3E7Z0 62 aa1.3□□□□□ -2.2
UBP1YDL122W FMP49A0A023PZB3 126 aa1.29□□□□□ -2.2
UBP1YDL122W HSP12P22943 109 aaKnown RBP1.29□□□□□ -2.2
UBP1YDL122W AHT1P29589 182 aa1.29□□□□□ -2.2
UBP1YDL122W MRP49P32388 137 aa1.29□□□□□ -2.2
UBP1YDL122W YHR140WP38842 239 aa1.29□□□□□ -2.2
UBP1YDL122W VMA7P39111 118 aa1.29□□□□□ -2.2
UBP1YDL122W SMX2P40204 77 aaKnown RBP1.29□□□□□ -2.2
UBP1YDL122W MPM1P40364 252 aa1.29□□□□□ -2.2
UBP1YDL122W DIE2P50076 525 aa1.29□□□□□ -2.2
UBP1YDL122W YNL019CP53975 284 aa1.29□□□□□ -2.2
UBP1YDL122W EST3Q03096 181 aa1.29□□□□□ -2.2
UBP1YDL122W LIP1Q03579 150 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms